RNA–Protein interactions for RNA: ENSMUST00000029549.15

Tpm3-201, Transcript of Tropomyosin alpha-3 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm3, Length 2,230 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3-201ENSMUST00000029549 Cdk2ap2Q9CPY4 127 aa9.52□□□□□ -0.88
Tpm3-201ENSMUST00000029549 Igkv1-88A0A140T8N1 120 aa9.52□□□□□ -0.89
Tpm3-201ENSMUST00000029549 Gm7102J3QQ10 178 aa9.52□□□□□ -0.89
Tpm3-201ENSMUST00000029549 Igkv2-109A0A075B5K6 120 aa9.51□□□□□ -0.89
Tpm3-201ENSMUST00000029549 2310034G01RikA0A286YDL3 209 aa9.51□□□□□ -0.89
Tpm3-201ENSMUST00000029549 BC048502Q80Y74 154 aa9.51□□□□□ -0.89
Tpm3-201ENSMUST00000029549 Dnah7bL7N1Y0 4068 aa9.51□□□□□ -0.89
Tpm3-201ENSMUST00000029549 E130218I03RikA0A0U1RNU5 63 aa9.5□□□□□ -0.89
Tpm3-201ENSMUST00000029549 Gm10251J3QPM5 127 aa9.49□□□□□ -0.89
Tpm3-201ENSMUST00000029549 Dnah1E9Q8T7 4250 aa9.49□□□□□ -0.89
Tpm3-201ENSMUST00000029549 Msrb1Q9JLC3 116 aa9.48□□□□□ -0.89
Tpm3-201ENSMUST00000029549 Gm9507D3Z5T3 223 aa9.48□□□□□ -0.89
Tpm3-201ENSMUST00000029549 Ighv10-3A0A075B5T6 119 aa9.47□□□□□ -0.89
Tpm3-201ENSMUST00000029549 Defa16P50714 93 aa9.47□□□□□ -0.89
Tpm3-201ENSMUST00000029549 Sprr1aQ62266 144 aa9.47□□□□□ -0.89
Tpm3-201ENSMUST00000029549 Atp5eP56382 52 aa9.46□□□□□ -0.89
Tpm3-201ENSMUST00000029549 Elof1P60003 83 aa9.46□□□□□ -0.9
Tpm3-201ENSMUST00000029549 Gm11627A6PWP4 55 aa9.45□□□□□ -0.9
Tpm3-201ENSMUST00000029549 Cd164Q9R0L9 197 aa9.45□□□□□ -0.9
Tpm3-201ENSMUST00000029549 Igkv8-26A0A075B5N5 123 aa9.44□□□□□ -0.9
Tpm3-201ENSMUST00000029549 2310061N02RikQ9D6S9 174 aa9.44□□□□□ -0.9
Tpm3-201ENSMUST00000029549 BB014433Q8C5R5 389 aa9.44□□□□□ -0.9
Tpm3-201ENSMUST00000029549 Q9DAA7 145 aa9.44□□□□□ -0.9
Tpm3-201ENSMUST00000029549 Igkv3-12A0A140T8P0 119 aa9.43□□□□□ -0.9
Tpm3-201ENSMUST00000029549 Gm10735Q3US96 136 aa9.43□□□□□ -0.9
Tpm3-201ENSMUST00000029549 Gm7276Q3TYW4 209 aa9.42□□□□□ -0.9
Tpm3-201ENSMUST00000029549 4930519P11RikQ9CUJ8 166 aa9.41□□□□□ -0.9
Tpm3-201ENSMUST00000029549 9530003J23RikQ8BM26 151 aa9.41□□□□□ -0.9
Tpm3-201ENSMUST00000029549 TgO08710 2766 aa9.41□□□□□ -0.9
Tpm3-201ENSMUST00000029549 Smim29Q8R043 75 aa9.4□□□□□ -0.9
Tpm3-201ENSMUST00000029549 Prr13Q9CQJ5 137 aa9.4□□□□□ -0.9
Tpm3-201ENSMUST00000029549 Dync2h1Q45VK7 4306 aa9.4□□□□□ -0.9
Tpm3-201ENSMUST00000029549 Igkv8-27A0A0G2JF28 120 aa9.4□□□□□ -0.91
Tpm3-201ENSMUST00000029549 Igkv8-30A0A140T8M3 121 aa9.4□□□□□ -0.91
Tpm3-201ENSMUST00000029549 Lamtor3O88653 124 aa9.4□□□□□ -0.91
Tpm3-201ENSMUST00000029549 Defa1P11477 93 aa9.4□□□□□ -0.91
Tpm3-201ENSMUST00000029549 Wfdc6bF6ULY1 148 aa9.39□□□□□ -0.91
Tpm3-201ENSMUST00000029549 Pou2af1Q64693 256 aa9.39□□□□□ -0.91
Tpm3-201ENSMUST00000029549 Gm9918Q8BUR5 174 aa9.38□□□□□ -0.91
Tpm3-201ENSMUST00000029549 Dmac1Q9CQ00 111 aa9.37□□□□□ -0.91
Tpm3-201ENSMUST00000029549 Inafm2A0A1L1STD6 152 aa9.37□□□□□ -0.91
Tpm3-201ENSMUST00000029549 P84750 121 aa9.37□□□□□ -0.91
Tpm3-201ENSMUST00000029549 BaalcQ8VHV1 145 aa9.37□□□□□ -0.91
Tpm3-201ENSMUST00000029549 Dnah7aE9Q0T8 4024 aa9.36□□□□□ -0.91
Tpm3-201ENSMUST00000029549 Obox2E9PXV9 151 aa9.36□□□□□ -0.91
Tpm3-201ENSMUST00000029549 Prol1E9PYQ4 312 aa9.36□□□□□ -0.91
Tpm3-201ENSMUST00000029549 Fam168bQ80XQ8 194 aa9.36□□□□□ -0.91
Tpm3-201ENSMUST00000029549 Defa4P28311 92 aa9.36□□□□□ -0.91
Tpm3-201ENSMUST00000029549 Ormdl1Q921I0 153 aa9.36□□□□□ -0.91
Tpm3-201ENSMUST00000029549 Defb37Q7TMD2 62 aa9.35□□□□□ -0.91
Tpm3-201ENSMUST00000029549 Ntn5Q3UQ22 452 aa9.33□□□□□ -0.92
Tpm3-201ENSMUST00000029549 PlecQ9QXS1 4691 aaKnown RBP9.33□□□□□ -0.92
Tpm3-201ENSMUST00000029549 Igkv3-2A0A075B5P0 119 aa9.33□□□□□ -0.92
Tpm3-201ENSMUST00000029549 Ighv2-5A0A0A6YY69 116 aa9.32□□□□□ -0.92
Tpm3-201ENSMUST00000029549 Gm10308Q9CVR5 141 aa9.32□□□□□ -0.92
Tpm3-201ENSMUST00000029549 Igkv1-122A0A140T8M9 119 aa9.31□□□□□ -0.92
Tpm3-201ENSMUST00000029549 Krtap10-10A0A1W2P7T6 217 aa9.31□□□□□ -0.92
Tpm3-201ENSMUST00000029549 Rbm3O89086 153 aaKnown RBP9.31□□□□□ -0.92
Tpm3-201ENSMUST00000029549 Defb40Q70KL2 73 aa9.31□□□□□ -0.92
Tpm3-201ENSMUST00000029549 Fam19a1Q7TPG8 133 aa9.31□□□□□ -0.92
Tpm3-201ENSMUST00000029549 Pde6gP09174 87 aa9.31□□□□□ -0.92
Tpm3-201ENSMUST00000029549 A730071L15RikQ8C4X0 137 aa9.3□□□□□ -0.92
Tpm3-201ENSMUST00000029549 Fam19a5Q91WE9 132 aa9.3□□□□□ -0.92
Tpm3-201ENSMUST00000029549 Gm28539A0A087WSL9 92 aa9.29□□□□□ -0.92
Tpm3-201ENSMUST00000029549 Igkv8-21A0A140T8P7 120 aa9.29□□□□□ -0.92
Tpm3-201ENSMUST00000029549 Tmem254aP0DN89 123 aa9.29□□□□□ -0.92
Tpm3-201ENSMUST00000029549 Tmem254bP0DN90 123 aa9.29□□□□□ -0.92
Tpm3-201ENSMUST00000029549 Tmem254cP0DN91 123 aa9.29□□□□□ -0.92
Tpm3-201ENSMUST00000029549 4930535I16RikQ9CUI2 172 aa9.29□□□□□ -0.92
Tpm3-201ENSMUST00000029549 Tmem243B2RVB9 118 aa9.28□□□□□ -0.92
Tpm3-201ENSMUST00000029549 Igf1P05017 153 aa9.28□□□□□ -0.92
Tpm3-201ENSMUST00000029549 Ubl5Q9EPV8 73 aa9.28□□□□□ -0.92
Tpm3-201ENSMUST00000029549 SycnQ8VCK7 134 aa9.27□□□□□ -0.93
Tpm3-201ENSMUST00000029549 Gm11011D3Z3L9 86 aa9.26□□□□□ -0.93
Tpm3-201ENSMUST00000029549 Vpreb2P13373 142 aa9.26□□□□□ -0.93
Tpm3-201ENSMUST00000029549 Gm10837Q3UTT8 145 aa9.25□□□□□ -0.93
Tpm3-201ENSMUST00000029549 SvipQ3UZP4 77 aa9.25□□□□□ -0.93
Tpm3-201ENSMUST00000029549 A930002H24RikQ8C8Y3 163 aa9.25□□□□□ -0.93
Tpm3-201ENSMUST00000029549 Igkv8-28A0A0G2JE47 121 aa9.24□□□□□ -0.93
Tpm3-201ENSMUST00000029549 A0A286YE02 88 aa9.24□□□□□ -0.93
Tpm3-201ENSMUST00000029549 Fam104aA2A6P4 185 aa9.23□□□□□ -0.93
Tpm3-201ENSMUST00000029549 A830005F24RikQ8BRT5 167 aa9.23□□□□□ -0.93
Tpm3-201ENSMUST00000029549 Hist1h4aP62806 103 aaKnown RBP9.23□□□□□ -0.93
Tpm3-201ENSMUST00000029549 Zcchc13Q9D548 170 aa9.23□□□□□ -0.93
Tpm3-201ENSMUST00000029549 Sfta2E9PXB6 77 aa9.22□□□□□ -0.93
Tpm3-201ENSMUST00000029549 Nupr2Q497P3 102 aa9.22□□□□□ -0.93
Tpm3-201ENSMUST00000029549 MplkipQ9D011 178 aa9.21□□□□□ -0.93
Tpm3-201ENSMUST00000029549 Dnah7cA0A087WR13 4024 aa9.21□□□□□ -0.94
Tpm3-201ENSMUST00000029549 Ighv2-2A0A075B5P8 116 aa9.2□□□□□ -0.94
Tpm3-201ENSMUST00000029549 P01821 116 aa9.2□□□□□ -0.94
Tpm3-201ENSMUST00000029549 Defa23Q5G866 93 aa9.2□□□□□ -0.94
Tpm3-201ENSMUST00000029549 U90926O08546 118 aa9.19□□□□□ -0.94
Tpm3-201ENSMUST00000029549 Cox6a2P43023 97 aa9.19□□□□□ -0.94
Tpm3-201ENSMUST00000029549 PkigO70139 76 aa9.19□□□□□ -0.94
Tpm3-201ENSMUST00000029549 Sprr2jO70561 109 aa9.19□□□□□ -0.94
Tpm3-201ENSMUST00000029549 Defa27F2Z403 93 aa9.18□□□□□ -0.94
Tpm3-201ENSMUST00000029549 Ube2bP63147 152 aa9.17□□□□□ -0.94
Tpm3-201ENSMUST00000029549 Gm37389A0A0A6YW05 95 aa9.17□□□□□ -0.94
Tpm3-201ENSMUST00000029549 Vpreb3D3Z6J4 130 aa9.17□□□□□ -0.94
Tpm3-201ENSMUST00000029549 Vpreb1P13372 142 aa9.17□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 77.3 ms