RNA–Protein interactions for RNA: ENSMUST00000022225.11

Trim23-201, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim23, Length 3,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-201ENSMUST00000022225 Gm7276Q3TYW4 209 aa8.17□□□□□ -1.1
Trim23-201ENSMUST00000022225 Lrrk2Q5S006 2527 aa8.16□□□□□ -1.1
Trim23-201ENSMUST00000022225 Gm10160F6Y577 67 aa8.16□□□□□ -1.1
Trim23-201ENSMUST00000022225 Gm17577J3QNF7 156 aa8.16□□□□□ -1.1
Trim23-201ENSMUST00000022225 Gm17509Q9CZ61 145 aa8.16□□□□□ -1.1
Trim23-201ENSMUST00000022225 Ep300B2RWS6 2412 aa8.15□□□□□ -1.1
Trim23-201ENSMUST00000022225 Utp20Q5XG71 2788 aaKnown RBP8.15□□□□□ -1.1
Trim23-201ENSMUST00000022225 Igkv4-92A0A0B4J1I2 117 aa8.15□□□□□ -1.1
Trim23-201ENSMUST00000022225 Fam104aA2A6P4 185 aa8.15□□□□□ -1.1
Trim23-201ENSMUST00000022225 Igkv1-122A0A140T8M9 119 aa8.15□□□□□ -1.11
Trim23-201ENSMUST00000022225 Akap13E9Q394 2776 aa8.14□□□□□ -1.11
Trim23-201ENSMUST00000022225 A0A286YCN5 57 aa8.14□□□□□ -1.11
Trim23-201ENSMUST00000022225 Mapk1ip1lQ8BH93 242 aa8.14□□□□□ -1.11
Trim23-201ENSMUST00000022225 Chd8Q09XV5 2582 aaKnown RBP8.14□□□□□ -1.11
Trim23-201ENSMUST00000022225 Cox6a2P43023 97 aa8.14□□□□□ -1.11
Trim23-201ENSMUST00000022225 Mrpl34Q99N91 92 aa8.14□□□□□ -1.11
Trim23-201ENSMUST00000022225 Xirp2Q4U4S6 3784 aa8.12□□□□□ -1.11
Trim23-201ENSMUST00000022225 BC067074F6RXI4 2391 aa8.12□□□□□ -1.11
Trim23-201ENSMUST00000022225 Zfyve26Q5DU37 2529 aa8.11□□□□□ -1.11
Trim23-201ENSMUST00000022225 Pkd1l2Q7TN88 2461 aa8.11□□□□□ -1.11
Trim23-201ENSMUST00000022225 9230102O04RikA2ASX7 82 aa8.11□□□□□ -1.11
Trim23-201ENSMUST00000022225 Phxr4P15974 95 aa8.11□□□□□ -1.11
Trim23-201ENSMUST00000022225 Cdk2ap2Q9CPY4 127 aa8.1□□□□□ -1.11
Trim23-201ENSMUST00000022225 A0A286YE02 88 aa8.1□□□□□ -1.11
Trim23-201ENSMUST00000022225 Usp9xP70398 2559 aaKnown RBP8.1□□□□□ -1.11
Trim23-201ENSMUST00000022225 NbasE9Q411 2356 aa8.09□□□□□ -1.11
Trim23-201ENSMUST00000022225 Gm37013Q8K491 104 aa8.09□□□□□ -1.11
Trim23-201ENSMUST00000022225 Smim29Q8R043 75 aa8.09□□□□□ -1.11
Trim23-201ENSMUST00000022225 A730009L09RikA0A1B0GS82 72 aa8.09□□□□□ -1.11
Trim23-201ENSMUST00000022225 Gm44790A0A0N4SV91 103 aa8.08□□□□□ -1.12
Trim23-201ENSMUST00000022225 Igkv3-4A0A140T8Q4 119 aa8.08□□□□□ -1.12
Trim23-201ENSMUST00000022225 Gm9913Q8BQQ2 135 aa8.08□□□□□ -1.12
Trim23-201ENSMUST00000022225 Sptbn4E9PX29 2561 aa8.08□□□□□ -1.12
Trim23-201ENSMUST00000022225 1700042G07RikB1AUF7 90 aa8.07□□□□□ -1.12
Trim23-201ENSMUST00000022225 Cox7b2Q9D2H1 82 aa8.07□□□□□ -1.12
Trim23-201ENSMUST00000022225 Myo9aQ8C170 2542 aa8.06□□□□□ -1.12
Trim23-201ENSMUST00000022225 Defb40Q70KL2 73 aa8.06□□□□□ -1.12
Trim23-201ENSMUST00000022225 FlncQ8VHX6 2726 aaKnown RBP8.05□□□□□ -1.12
Trim23-201ENSMUST00000022225 Nf1Q04690 2841 aa8.04□□□□□ -1.12
Trim23-201ENSMUST00000022225 Defb18Q30KP5 85 aa8.03□□□□□ -1.12
Trim23-201ENSMUST00000022225 Leap2Q91V13 76 aa8.03□□□□□ -1.12
Trim23-201ENSMUST00000022225 Igkv3-1A0A075B5P1 119 aa8.03□□□□□ -1.12
Trim23-201ENSMUST00000022225 Gm26620Q9CY65 116 aa8.03□□□□□ -1.12
Trim23-201ENSMUST00000022225 CubnQ9JLB4 3623 aa8.03□□□□□ -1.12
Trim23-201ENSMUST00000022225 Ube2bP63147 152 aa8.03□□□□□ -1.12
Trim23-201ENSMUST00000022225 U90926O08546 118 aa8.02□□□□□ -1.13
Trim23-201ENSMUST00000022225 Gm10643Q3URG9 111 aa8.02□□□□□ -1.13
Trim23-201ENSMUST00000022225 Phxr5P08399 672 aa8□□□□□ -1.13
Trim23-201ENSMUST00000022225 B9d2Q3UK10 175 aa8□□□□□ -1.13
Trim23-201ENSMUST00000022225 Camk2n2Q78WH7 79 aa8□□□□□ -1.13
Trim23-201ENSMUST00000022225 Sprr4Q8CGN8 76 aa8□□□□□ -1.13
Trim23-201ENSMUST00000022225 PscaP57096 123 aa8□□□□□ -1.13
Trim23-201ENSMUST00000022225 Ube2aQ9Z255 152 aa7.99□□□□□ -1.13
Trim23-201ENSMUST00000022225 D730001G18RikA0A087WQU7 115 aa7.97□□□□□ -1.13
Trim23-201ENSMUST00000022225 BsnO88737 3942 aa7.97□□□□□ -1.13
Trim23-201ENSMUST00000022225 A0A286YE49 62 aa7.97□□□□□ -1.13
Trim23-201ENSMUST00000022225 Gm17521F6QAC8 156 aa7.97□□□□□ -1.13
Trim23-201ENSMUST00000022225 Ighv8-13A0A075B5Y0 101 aa7.96□□□□□ -1.13
Trim23-201ENSMUST00000022225 1700074P13RikQ9D9G7 251 aa7.96□□□□□ -1.14
Trim23-201ENSMUST00000022225 Igkv3-3A0A140T8Q0 119 aa7.96□□□□□ -1.14
Trim23-201ENSMUST00000022225 Vpreb3D3Z6J4 130 aa7.94□□□□□ -1.14
Trim23-201ENSMUST00000022225 Gm21886J3QJU9 214 aa7.94□□□□□ -1.14
Trim23-201ENSMUST00000022225 Gm12353A2AGJ4 60 aa7.94□□□□□ -1.14
Trim23-201ENSMUST00000022225 Gm3646F6S692 53 aa7.94□□□□□ -1.14
Trim23-201ENSMUST00000022225 Gm10837Q3UTT8 145 aa7.93□□□□□ -1.14
Trim23-201ENSMUST00000022225 Dmac1Q9CQ00 111 aa7.93□□□□□ -1.14
Trim23-201ENSMUST00000022225 Zcchc13Q9D548 170 aa7.93□□□□□ -1.14
Trim23-201ENSMUST00000022225 Setd2E9Q5F9 2537 aa7.93□□□□□ -1.14
Trim23-201ENSMUST00000022225 Ptpn13Q64512 2453 aa7.93□□□□□ -1.14
Trim23-201ENSMUST00000022225 Snhg11Q4G0K9 87 aa7.93□□□□□ -1.14
Trim23-201ENSMUST00000022225 Brwd1Q921C3 2304 aa7.92□□□□□ -1.14
Trim23-201ENSMUST00000022225 P84750 121 aa7.92□□□□□ -1.14
Trim23-201ENSMUST00000022225 Pdzd2E9Q1M1 2796 aa7.92□□□□□ -1.14
Trim23-201ENSMUST00000022225 Hspg2Q05793 3707 aaKnown RBP7.92□□□□□ -1.14
Trim23-201ENSMUST00000022225 1700018G05RikA0A1B0GSI2 66 aa7.92□□□□□ -1.14
Trim23-201ENSMUST00000022225 Chtf8P0CG14 533 aa7.91□□□□□ -1.14
Trim23-201ENSMUST00000022225 Nbeal1E9PYP2 2688 aa7.91□□□□□ -1.14
Trim23-201ENSMUST00000022225 Reg3aO09037 175 aa7.91□□□□□ -1.14
Trim23-201ENSMUST00000022225 Ankrd17Q99NH0 2603 aaKnown RBP7.9□□□□□ -1.14
Trim23-201ENSMUST00000022225 Hivep3A2A884 2348 aa7.9□□□□□ -1.14
Trim23-201ENSMUST00000022225 NipblQ6KCD5 2798 aaKnown RBP7.89□□□□□ -1.15
Trim23-201ENSMUST00000022225 Itpr1P11881 2749 aa7.89□□□□□ -1.15
Trim23-201ENSMUST00000022225 Phf5aP83870 110 aaKnown RBP7.88□□□□□ -1.15
Trim23-201ENSMUST00000022225 Cmc4Q61908 68 aa7.87□□□□□ -1.15
Trim23-201ENSMUST00000022225 Abca12E9Q876 2595 aa7.87□□□□□ -1.15
Trim23-201ENSMUST00000022225 Ccl21aP84444 133 aa7.86□□□□□ -1.15
Trim23-201ENSMUST00000022225 Ccl21bP86792 133 aa7.86□□□□□ -1.15
Trim23-201ENSMUST00000022225 Ccl21cP86793 133 aa7.86□□□□□ -1.15
Trim23-201ENSMUST00000022225 Bahcc1Q3UHR0 2643 aa7.86□□□□□ -1.15
Trim23-201ENSMUST00000022225 Ank2Q8C8R3 3898 aa7.85□□□□□ -1.15
Trim23-201ENSMUST00000022225 SptssbQ925E8 76 aa7.85□□□□□ -1.15
Trim23-201ENSMUST00000022225 Ankrd11E9Q4F7 2643 aa7.85□□□□□ -1.15
Trim23-201ENSMUST00000022225 Fam168bQ80XQ8 194 aa7.85□□□□□ -1.15
Trim23-201ENSMUST00000022225 Tenm3Q9WTS6 2715 aa7.84□□□□□ -1.15
Trim23-201ENSMUST00000022225 Rpl37aP61514 92 aa7.84□□□□□ -1.15
Trim23-201ENSMUST00000022225 Reg3bP35230 175 aa7.84□□□□□ -1.16
Trim23-201ENSMUST00000022225 Igkv3-12A0A140T8P0 119 aa7.82□□□□□ -1.16
Trim23-201ENSMUST00000022225 Prol1E9PYQ4 312 aa7.82□□□□□ -1.16
Trim23-201ENSMUST00000022225 Wfdc6bF6ULY1 148 aa7.81□□□□□ -1.16
Trim23-201ENSMUST00000022225 Gm2310J3QNJ2 377 aa7.81□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 135.3 ms