RNA–Protein interactions for RNA: ENSMUST00000021864.7

Ssr1-201, Transcript of Translocon-associated protein subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr1, Length 9,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-201ENSMUST00000021864 E130208F15RikQ3UPV3 143 aa5.7□□□□□ -1.5
Ssr1-201ENSMUST00000021864 Gm26661M0QWV4 156 aa5.7□□□□□ -1.5
Ssr1-201ENSMUST00000021864 AplnQ9R0R4 77 aa5.7□□□□□ -1.5
Ssr1-201ENSMUST00000021864 4930518I15RikQ3V2W7 57 aa5.7□□□□□ -1.5
Ssr1-201ENSMUST00000021864 Gm10300Q8C8P7 189 aa5.7□□□□□ -1.5
Ssr1-201ENSMUST00000021864 Elof1P60003 83 aa5.7□□□□□ -1.5
Ssr1-201ENSMUST00000021864 Gm27235Q3UW50 83 aa5.69□□□□□ -1.5
Ssr1-201ENSMUST00000021864 Rpl37aP61514 92 aa5.69□□□□□ -1.5
Ssr1-201ENSMUST00000021864 Gm10837Q3UTT8 145 aa5.69□□□□□ -1.5
Ssr1-201ENSMUST00000021864 SnurfQ9WU12 71 aa5.69□□□□□ -1.5
Ssr1-201ENSMUST00000021864 Gm10135F6TEE5 83 aa5.69□□□□□ -1.5
Ssr1-201ENSMUST00000021864 Psors1c2Q80ZC9 134 aa5.68□□□□□ -1.5
Ssr1-201ENSMUST00000021864 RetnlbQ99P86 105 aa5.67□□□□□ -1.5
Ssr1-201ENSMUST00000021864 Gm20661K7N787 53 aa5.67□□□□□ -1.5
Ssr1-201ENSMUST00000021864 AW011738F6S7Q2 159 aa5.67□□□□□ -1.5
Ssr1-201ENSMUST00000021864 Crip3Q6Q6R3 243 aa5.67□□□□□ -1.5
Ssr1-201ENSMUST00000021864 Spaca4Q80ZQ0 127 aa5.67□□□□□ -1.5
Ssr1-201ENSMUST00000021864 3110070M22RikQ9DAQ7 118 aa5.67□□□□□ -1.5
Ssr1-201ENSMUST00000021864 Ep400Q8CHI8 3072 aaKnown RBP5.67□□□□□ -1.5
Ssr1-201ENSMUST00000021864 Phf5aP83870 110 aaKnown RBP5.66□□□□□ -1.5
Ssr1-201ENSMUST00000021864 Snhg11Q4G0K9 87 aa5.66□□□□□ -1.5
Ssr1-201ENSMUST00000021864 Gm11565A2A4M7 156 aa5.65□□□□□ -1.51
Ssr1-201ENSMUST00000021864 Itpr1P11881 2749 aa5.65□□□□□ -1.51
Ssr1-201ENSMUST00000021864 Defb37Q7TMD2 62 aa5.63□□□□□ -1.51
Ssr1-201ENSMUST00000021864 Pla2g10Q9QXX3 151 aa5.63□□□□□ -1.51
Ssr1-201ENSMUST00000021864 MobpQ9D2P8 170 aa5.62□□□□□ -1.51
Ssr1-201ENSMUST00000021864 Gm44790A0A0N4SV91 103 aa5.62□□□□□ -1.51
Ssr1-201ENSMUST00000021864 Gm10197F6QEY5 67 aa5.61□□□□□ -1.51
Ssr1-201ENSMUST00000021864 Sostdc1Q9CQN4 206 aa5.6□□□□□ -1.51
Ssr1-201ENSMUST00000021864 Defb1P56386 69 aa5.6□□□□□ -1.51
Ssr1-201ENSMUST00000021864 OxtP35454 125 aa5.58□□□□□ -1.52
Ssr1-201ENSMUST00000021864 Gm10770F7D043 238 aa5.58□□□□□ -1.52
Ssr1-201ENSMUST00000021864 CenpfE9Q3P4 2997 aaKnown RBP5.58□□□□□ -1.52
Ssr1-201ENSMUST00000021864 AtrQ9JKK8 2635 aa5.58□□□□□ -1.52
Ssr1-201ENSMUST00000021864 Cdip1Q9DB75 208 aa5.58□□□□□ -1.52
Ssr1-201ENSMUST00000021864 Krtap16-1A2A5X5 502 aa5.57□□□□□ -1.52
Ssr1-201ENSMUST00000021864 Akap13E9Q394 2776 aa5.57□□□□□ -1.52
Ssr1-201ENSMUST00000021864 Rps28P62858 69 aaKnown RBP5.56□□□□□ -1.52
Ssr1-201ENSMUST00000021864 Gm5617Q91VN2 117 aa5.56□□□□□ -1.52
Ssr1-201ENSMUST00000021864 Dnah12Q3V0Q1 3086 aa5.56□□□□□ -1.52
Ssr1-201ENSMUST00000021864 Q8BT88 171 aa5.56□□□□□ -1.52
Ssr1-201ENSMUST00000021864 Gm3233E9Q2H5 230 aa5.55□□□□□ -1.52
Ssr1-201ENSMUST00000021864 Rnase13Q5GAM7 153 aa5.54□□□□□ -1.52
Ssr1-201ENSMUST00000021864 Uqcr11Q9CPX8 56 aa5.54□□□□□ -1.52
Ssr1-201ENSMUST00000021864 Gm10308Q9CVR5 141 aa5.54□□□□□ -1.52
Ssr1-201ENSMUST00000021864 7530416G11RikJ3QJX6 159 aa5.53□□□□□ -1.52
Ssr1-201ENSMUST00000021864 A530084C06RikQ3UTW2 186 aa5.53□□□□□ -1.52
Ssr1-201ENSMUST00000021864 HttP42859 3119 aa5.53□□□□□ -1.52
Ssr1-201ENSMUST00000021864 Cdc42se1Q8BHL7 80 aa5.53□□□□□ -1.52
Ssr1-201ENSMUST00000021864 Krtap26-1Q9D7N2 215 aa5.53□□□□□ -1.52
Ssr1-201ENSMUST00000021864 Fam168bQ80XQ8 194 aa5.52□□□□□ -1.53
Ssr1-201ENSMUST00000021864 Fn1P11276 2477 aaKnown RBP5.52□□□□□ -1.53
Ssr1-201ENSMUST00000021864 Tnrc18Q80WC3 2878 aa5.51□□□□□ -1.53
Ssr1-201ENSMUST00000021864 TrioQ0KL02 3102 aa5.51□□□□□ -1.53
Ssr1-201ENSMUST00000021864 Gm10772F7AIG4 85 aa5.51□□□□□ -1.53
Ssr1-201ENSMUST00000021864 Gm9821Q8K076 103 aa5.5□□□□□ -1.53
Ssr1-201ENSMUST00000021864 Lelp1Q9DAE3 120 aa5.49□□□□□ -1.53
Ssr1-201ENSMUST00000021864 Sprr4Q8CGN8 76 aa5.49□□□□□ -1.53
Ssr1-201ENSMUST00000021864 Coa5Q99M07 74 aa5.48□□□□□ -1.53
Ssr1-201ENSMUST00000021864 FlnaQ8BTM8 2647 aaKnown RBP5.48□□□□□ -1.53
Ssr1-201ENSMUST00000021864 Cep350E9Q309 3095 aa5.48□□□□□ -1.53
Ssr1-201ENSMUST00000021864 CriptO70333 101 aa5.48□□□□□ -1.53
Ssr1-201ENSMUST00000021864 Cypt15B1AXS0 87 aa5.48□□□□□ -1.53
Ssr1-201ENSMUST00000021864 HrnrQ8VHD8 2496 aa5.48□□□□□ -1.53
Ssr1-201ENSMUST00000021864 Gm26620Q9CY65 116 aa5.47□□□□□ -1.53
Ssr1-201ENSMUST00000021864 Usp34Q6ZQ93 3582 aa5.47□□□□□ -1.53
Ssr1-201ENSMUST00000021864 Nsd1O88491 2588 aaKnown RBP5.47□□□□□ -1.53
Ssr1-201ENSMUST00000021864 Gm11213A0A1B0GR83 88 aa5.47□□□□□ -1.53
Ssr1-201ENSMUST00000021864 Prune2Q52KR3 3084 aa5.46□□□□□ -1.54
Ssr1-201ENSMUST00000021864 Gm7173A0A0G2JEB6 3132 aa5.45□□□□□ -1.54
Ssr1-201ENSMUST00000021864 Stab1Q8R4Y4 2571 aa5.45□□□□□ -1.54
Ssr1-201ENSMUST00000021864 Gm7276Q3TYW4 209 aa5.45□□□□□ -1.54
Ssr1-201ENSMUST00000021864 Phxr5P08399 672 aa5.44□□□□□ -1.54
Ssr1-201ENSMUST00000021864 Gm10643Q3URG9 111 aa5.44□□□□□ -1.54
Ssr1-201ENSMUST00000021864 AI854703Q8BIN3 203 aa5.44□□□□□ -1.54
Ssr1-201ENSMUST00000021864 Krtap11-1E9Q2E9 183 aa5.44□□□□□ -1.54
Ssr1-201ENSMUST00000021864 Phxr4P15974 95 aa5.43□□□□□ -1.54
Ssr1-201ENSMUST00000021864 Chd7A2AJK6 2986 aaKnown RBP5.42□□□□□ -1.54
Ssr1-201ENSMUST00000021864 Lama3Q61789 3330 aa5.41□□□□□ -1.54
Ssr1-201ENSMUST00000021864 Defb9Q8R2I6 67 aa5.41□□□□□ -1.54
Ssr1-201ENSMUST00000021864 AY074887Q8R5F9 132 aa5.41□□□□□ -1.54
Ssr1-201ENSMUST00000021864 Gm9195A0A140LHT4 2805 aa5.4□□□□□ -1.54
Ssr1-201ENSMUST00000021864 Prrc2cQ3TLH4 2846 aaKnown RBP5.4□□□□□ -1.55
Ssr1-201ENSMUST00000021864 CnbpP53996 178 aaKnown RBP5.4□□□□□ -1.55
Ssr1-201ENSMUST00000021864 Col12a1Q60847 3120 aa5.39□□□□□ -1.55
Ssr1-201ENSMUST00000021864 Gcn1E9PVA8 2671 aaKnown RBP5.39□□□□□ -1.55
Ssr1-201ENSMUST00000021864 Spink7Q6IE32 76 aa5.39□□□□□ -1.55
Ssr1-201ENSMUST00000021864 Sprr1bQ62267 153 aa5.39□□□□□ -1.55
Ssr1-201ENSMUST00000021864 Mast4Q811L6 2618 aa5.38□□□□□ -1.55
Ssr1-201ENSMUST00000021864 Rev3lQ61493 3122 aa5.38□□□□□ -1.55
Ssr1-201ENSMUST00000021864 Map1aQ9QYR6 2776 aa5.37□□□□□ -1.55
Ssr1-201ENSMUST00000021864 Lypd5Q9D7Z7 256 aa5.37□□□□□ -1.55
Ssr1-201ENSMUST00000021864 Gm7138L7N2C3 230 aa5.36□□□□□ -1.55
Ssr1-201ENSMUST00000021864 A330070K13RikQ8CA53 115 aa5.36□□□□□ -1.55
Ssr1-201ENSMUST00000021864 Gm3238W4VSP7 230 aa5.36□□□□□ -1.55
Ssr1-201ENSMUST00000021864 Zcchc13Q9D548 170 aa5.36□□□□□ -1.55
Ssr1-201ENSMUST00000021864 Gm21798J3QNU5 87 aa5.36□□□□□ -1.55
Ssr1-201ENSMUST00000021864 Gm7137J3QMW1 236 aa5.35□□□□□ -1.55
Ssr1-201ENSMUST00000021864 MgaA2AWL7 3003 aaKnown RBP5.35□□□□□ -1.55
Ssr1-201ENSMUST00000021864 Notch1Q01705 2531 aa5.35□□□□□ -1.55
Retrieved 100 of 22,080 RNA–protein pairs in 72 ms