RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Igkv8-30A0A140T8M3 121 aa11.04□□□□□ -0.64
Trim28-201ENSMUST00000005705 Gm11213A0A1B0GR83 88 aa11.04□□□□□ -0.64
Trim28-201ENSMUST00000005705 Gm9903Q8C9Y8 129 aa11.04□□□□□ -0.64
Trim28-201ENSMUST00000005705 Dph3Q8K0W9 82 aa11.04□□□□□ -0.64
Trim28-201ENSMUST00000005705 Gm37389A0A0A6YW05 95 aa11.03□□□□□ -0.64
Trim28-201ENSMUST00000005705 Ntn5Q3UQ22 452 aa11.03□□□□□ -0.64
Trim28-201ENSMUST00000005705 Igkv4-61A0A0G2JH00 117 aa11.03□□□□□ -0.64
Trim28-201ENSMUST00000005705 Pet100P0DJE0 76 aa11.03□□□□□ -0.64
Trim28-201ENSMUST00000005705 Ighv1-59A0A0A6YXE0 117 aa11.02□□□□□ -0.65
Trim28-201ENSMUST00000005705 Igkv1-122A0A140T8M9 119 aa11.02□□□□□ -0.65
Trim28-201ENSMUST00000005705 BaalcQ8VHV1 145 aa11.02□□□□□ -0.65
Trim28-201ENSMUST00000005705 Gm9805F6YK59 57 aa11.01□□□□□ -0.65
Trim28-201ENSMUST00000005705 Spink4O35679 86 aa11.01□□□□□ -0.65
Trim28-201ENSMUST00000005705 Fam19a3Q7TPG6 132 aa11.01□□□□□ -0.65
Trim28-201ENSMUST00000005705 FasnP19096 2504 aaKnown RBP11.01□□□□□ -0.65
Trim28-201ENSMUST00000005705 Stab2Q8R4U0 2559 aa11.01□□□□□ -0.65
Trim28-201ENSMUST00000005705 Gm17689B3GLJ4 109 aa11□□□□□ -0.65
Trim28-201ENSMUST00000005705 Igkv8-26A0A075B5N5 123 aa11□□□□□ -0.65
Trim28-201ENSMUST00000005705 A530084C06RikQ3UTW2 186 aa10.99□□□□□ -0.65
Trim28-201ENSMUST00000005705 Csmd3Q80T79 3707 aa10.99□□□□□ -0.65
Trim28-201ENSMUST00000005705 Sslp1Q3UN54 99 aa10.98□□□□□ -0.65
Trim28-201ENSMUST00000005705 Ighv10-3A0A075B5T6 119 aa10.98□□□□□ -0.65
Trim28-201ENSMUST00000005705 Sec61gP60060 68 aa10.98□□□□□ -0.65
Trim28-201ENSMUST00000005705 Reg3bP35230 175 aa10.97□□□□□ -0.65
Trim28-201ENSMUST00000005705 Ufsp1Q9CZP0 217 aa10.96□□□□□ -0.65
Trim28-201ENSMUST00000005705 4930556J24RikQ9D4U7 146 aa10.96□□□□□ -0.66
Trim28-201ENSMUST00000005705 Bean1Q9EQG5 255 aa10.96□□□□□ -0.66
Trim28-201ENSMUST00000005705 Gm36176A0A1W2P8D5 158 aa10.95□□□□□ -0.66
Trim28-201ENSMUST00000005705 Serp1Q9Z1W5 66 aa10.95□□□□□ -0.66
Trim28-201ENSMUST00000005705 A0A286YE02 88 aa10.94□□□□□ -0.66
Trim28-201ENSMUST00000005705 Smim29Q8R043 75 aa10.94□□□□□ -0.66
Trim28-201ENSMUST00000005705 P01819 144 aa10.93□□□□□ -0.66
Trim28-201ENSMUST00000005705 Msrb1Q9JLC3 116 aa10.93□□□□□ -0.66
Trim28-201ENSMUST00000005705 Gm10308Q9CVR5 141 aa10.92□□□□□ -0.66
Trim28-201ENSMUST00000005705 Gm43218A0A0G2JGT0 114 aa10.92□□□□□ -0.66
Trim28-201ENSMUST00000005705 Inafm2A0A1L1STD6 152 aa10.91□□□□□ -0.66
Trim28-201ENSMUST00000005705 9530003J23RikQ8BM26 151 aa10.91□□□□□ -0.66
Trim28-201ENSMUST00000005705 Spink8Q09TK9 105 aa10.91□□□□□ -0.66
Trim28-201ENSMUST00000005705 Ighv2-9A0A075B5Q5 116 aa10.9□□□□□ -0.66
Trim28-201ENSMUST00000005705 CnbpP53996 178 aaKnown RBP10.9□□□□□ -0.66
Trim28-201ENSMUST00000005705 A730009L09RikA0A1B0GS82 72 aa10.9□□□□□ -0.67
Trim28-201ENSMUST00000005705 Igkv8-34A0A0G2JDU0 121 aa10.89□□□□□ -0.67
Trim28-201ENSMUST00000005705 Sprr1bQ62267 153 aa10.89□□□□□ -0.67
Trim28-201ENSMUST00000005705 Cox7bP56393 80 aa10.88□□□□□ -0.67
Trim28-201ENSMUST00000005705 TgO08710 2766 aa10.88□□□□□ -0.67
Trim28-201ENSMUST00000005705 Igkv1-110A0A0B4J1I0 119 aa10.87□□□□□ -0.67
Trim28-201ENSMUST00000005705 Ighv10-1A0A0B4J1J6 119 aa10.87□□□□□ -0.67
Trim28-201ENSMUST00000005705 Sfta2E9PXB6 77 aa10.87□□□□□ -0.67
Trim28-201ENSMUST00000005705 Gm17577J3QNF7 156 aa10.87□□□□□ -0.67
Trim28-201ENSMUST00000005705 A830005F24RikQ8BRT5 167 aa10.86□□□□□ -0.67
Trim28-201ENSMUST00000005705 Defb12Q8K4N3 78 aa10.86□□□□□ -0.67
Trim28-201ENSMUST00000005705 Klk9Q32M27 251 aa10.86□□□□□ -0.67
Trim28-201ENSMUST00000005705 H2al1bA0A087WP11 105 aa10.85□□□□□ -0.67
Trim28-201ENSMUST00000005705 9230102O04RikA2ASX7 82 aa10.85□□□□□ -0.67
Trim28-201ENSMUST00000005705 H2al1kJ3QP08 105 aa10.85□□□□□ -0.67
Trim28-201ENSMUST00000005705 H2al1eQ810S6 105 aa10.85□□□□□ -0.67
Trim28-201ENSMUST00000005705 H2al1mQ9DAD9 105 aa10.85□□□□□ -0.67
Trim28-201ENSMUST00000005705 Gm9508A0A1W2P7W0 230 aa10.84□□□□□ -0.67
Trim28-201ENSMUST00000005705 Tcl1b3P56842 122 aa10.84□□□□□ -0.67
Trim28-201ENSMUST00000005705 Cd164Q9R0L9 197 aa10.84□□□□□ -0.67
Trim28-201ENSMUST00000005705 Vpreb2P13373 142 aa10.84□□□□□ -0.67
Trim28-201ENSMUST00000005705 Camk2n2Q78WH7 79 aa10.83□□□□□ -0.68
Trim28-201ENSMUST00000005705 2310034G01RikA0A286YDL3 209 aa10.81□□□□□ -0.68
Trim28-201ENSMUST00000005705 Snhg11Q4G0K9 87 aa10.8□□□□□ -0.68
Trim28-201ENSMUST00000005705 Cdk2ap2Q9CPY4 127 aa10.8□□□□□ -0.68
Trim28-201ENSMUST00000005705 Defb40Q70KL2 73 aa10.8□□□□□ -0.68
Trim28-201ENSMUST00000005705 A730071L15RikQ8C4X0 137 aa10.79□□□□□ -0.68
Trim28-201ENSMUST00000005705 AY074887Q8R5F9 132 aa10.79□□□□□ -0.68
Trim28-201ENSMUST00000005705 Prr15lQ8JZM2 100 aa10.79□□□□□ -0.68
Trim28-201ENSMUST00000005705 Gm11011D3Z3L9 86 aa10.78□□□□□ -0.68
Trim28-201ENSMUST00000005705 Igkv8-28A0A0G2JE47 121 aa10.77□□□□□ -0.69
Trim28-201ENSMUST00000005705 Gm10770F7D043 238 aa10.77□□□□□ -0.69
Trim28-201ENSMUST00000005705 A330070K13RikQ8CA53 115 aa10.77□□□□□ -0.69
Trim28-201ENSMUST00000005705 Dnah10D3YYQ8 4591 aa10.76□□□□□ -0.69
Trim28-201ENSMUST00000005705 Pou2af1Q64693 256 aa10.76□□□□□ -0.69
Trim28-201ENSMUST00000005705 E130114P18RikF6S0S7 154 aa10.75□□□□□ -0.69
Trim28-201ENSMUST00000005705 Cmc4Q61908 68 aa10.75□□□□□ -0.69
Trim28-201ENSMUST00000005705 Spint4Q9D263 159 aa10.75□□□□□ -0.69
Trim28-201ENSMUST00000005705 Gm10570F6VB42 170 aa10.75□□□□□ -0.69
Trim28-201ENSMUST00000005705 Fam168bQ80XQ8 194 aa10.75□□□□□ -0.69
Trim28-201ENSMUST00000005705 Cox7b2Q9D2H1 82 aa10.74□□□□□ -0.69
Trim28-201ENSMUST00000005705 Gm5617Q91VN2 117 aa10.73□□□□□ -0.69
Trim28-201ENSMUST00000005705 Igkv3-2A0A075B5P0 119 aa10.73□□□□□ -0.69
Trim28-201ENSMUST00000005705 Wfdc13Q5DQQ6 81 aa10.73□□□□□ -0.69
Trim28-201ENSMUST00000005705 Megf8P60882 2789 aa10.72□□□□□ -0.69
Trim28-201ENSMUST00000005705 Ighv2-5A0A0A6YY69 116 aa10.71□□□□□ -0.69
Trim28-201ENSMUST00000005705 P06320 134 aa10.71□□□□□ -0.69
Trim28-201ENSMUST00000005705 Muc6Q80T03 2850 aa10.7□□□□□ -0.7
Trim28-201ENSMUST00000005705 Tenm2Q9WTS5 2764 aa10.7□□□□□ -0.7
Trim28-201ENSMUST00000005705 Igkv4-92A0A0B4J1I2 117 aa10.69□□□□□ -0.7
Trim28-201ENSMUST00000005705 6430550D23RikE9Q1X6 194 aa10.69□□□□□ -0.7
Trim28-201ENSMUST00000005705 Trav14-1A0A0G2JF94 121 aa10.69□□□□□ -0.7
Trim28-201ENSMUST00000005705 BC048502Q80Y74 154 aa10.69□□□□□ -0.7
Trim28-201ENSMUST00000005705 Ndufc1Q9CQY9 76 aa10.68□□□□□ -0.7
Trim28-201ENSMUST00000005705 Gm17509Q9CZ61 145 aa10.67□□□□□ -0.7
Trim28-201ENSMUST00000005705 Elof1P60003 83 aa10.67□□□□□ -0.7
Trim28-201ENSMUST00000005705 Gm10197F6QEY5 67 aa10.65□□□□□ -0.7
Trim28-201ENSMUST00000005705 Pde6gP09174 87 aa10.65□□□□□ -0.7
Trim28-201ENSMUST00000005705 Gm10401E9Q3K6 71 aa10.64□□□□□ -0.71
Trim28-201ENSMUST00000005705 Gm16485Q8C4B7 115 aa10.64□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 58.1 ms