RNA–Protein interactions for RNA: ENSMUST00000001547.7

Col1a1-201, Transcript of Collagen alpha-1(I) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col1a1, Length 5,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1-201ENSMUST00000001547 Spaca4Q80ZQ0 127 aa9.5□□□□□ -0.89
Col1a1-201ENSMUST00000001547 Gm10770F7D043 238 aa9.49□□□□□ -0.89
Col1a1-201ENSMUST00000001547 Setd2E9Q5F9 2537 aa9.49□□□□□ -0.89
Col1a1-201ENSMUST00000001547 Phf5aP83870 110 aaKnown RBP9.49□□□□□ -0.89
Col1a1-201ENSMUST00000001547 Gm20538F6Z9R1 75 aa9.48□□□□□ -0.89
Col1a1-201ENSMUST00000001547 Phxr5P08399 672 aa9.48□□□□□ -0.89
Col1a1-201ENSMUST00000001547 Epg5Q80TA9 2572 aa9.47□□□□□ -0.89
Col1a1-201ENSMUST00000001547 Coa5Q99M07 74 aa9.45□□□□□ -0.9
Col1a1-201ENSMUST00000001547 Cdc42se1Q8BHL7 80 aa9.45□□□□□ -0.9
Col1a1-201ENSMUST00000001547 Rnase13Q5GAM7 153 aa9.44□□□□□ -0.9
Col1a1-201ENSMUST00000001547 Gm10837Q3UTT8 145 aa9.43□□□□□ -0.9
Col1a1-201ENSMUST00000001547 Gm42715A0A087WP63 3095 aaKnown RBP9.43□□□□□ -0.9
Col1a1-201ENSMUST00000001547 Gm17689B3GLJ4 109 aa9.43□□□□□ -0.9
Col1a1-201ENSMUST00000001547 7530416G11RikJ3QJX6 159 aa9.43□□□□□ -0.9
Col1a1-201ENSMUST00000001547 Abca12E9Q876 2595 aa9.42□□□□□ -0.9
Col1a1-201ENSMUST00000001547 CenpfE9Q3P4 2997 aaKnown RBP9.42□□□□□ -0.9
Col1a1-201ENSMUST00000001547 Krtap11-1E9Q2E9 183 aa9.41□□□□□ -0.9
Col1a1-201ENSMUST00000001547 Gm10308Q9CVR5 141 aa9.41□□□□□ -0.9
Col1a1-201ENSMUST00000001547 RetnlbQ99P86 105 aa9.4□□□□□ -0.9
Col1a1-201ENSMUST00000001547 Prr13Q9CQJ5 137 aa9.4□□□□□ -0.9
Col1a1-201ENSMUST00000001547 Q8BT88 171 aa9.4□□□□□ -0.91
Col1a1-201ENSMUST00000001547 Lypd5Q9D7Z7 256 aa9.39□□□□□ -0.91
Col1a1-201ENSMUST00000001547 Gm5617Q91VN2 117 aa9.38□□□□□ -0.91
Col1a1-201ENSMUST00000001547 Fam168bQ80XQ8 194 aa9.37□□□□□ -0.91
Col1a1-201ENSMUST00000001547 Zfp292Q9Z2U2 2698 aa9.36□□□□□ -0.91
Col1a1-201ENSMUST00000001547 Gm27235Q3UW50 83 aa9.35□□□□□ -0.91
Col1a1-201ENSMUST00000001547 Ep400Q8CHI8 3072 aaKnown RBP9.34□□□□□ -0.91
Col1a1-201ENSMUST00000001547 Cep192E9Q4Y4 2514 aaKnown RBP9.34□□□□□ -0.91
Col1a1-201ENSMUST00000001547 Sprr4Q8CGN8 76 aa9.33□□□□□ -0.92
Col1a1-201ENSMUST00000001547 PcntP48725 2898 aa9.33□□□□□ -0.92
Col1a1-201ENSMUST00000001547 Phxr4P15974 95 aa9.33□□□□□ -0.92
Col1a1-201ENSMUST00000001547 Unc79Q0KK59 2596 aa9.32□□□□□ -0.92
Col1a1-201ENSMUST00000001547 Eif4ebp3Q80VV3 101 aa9.31□□□□□ -0.92
Col1a1-201ENSMUST00000001547 Dnah12Q3V0Q1 3086 aa9.31□□□□□ -0.92
Col1a1-201ENSMUST00000001547 1810062G17RikG3X8Y2 129 aa9.3□□□□□ -0.92
Col1a1-201ENSMUST00000001547 Sprr1bQ62267 153 aa9.29□□□□□ -0.92
Col1a1-201ENSMUST00000001547 Gm3233E9Q2H5 230 aa9.29□□□□□ -0.92
Col1a1-201ENSMUST00000001547 AY074887Q8R5F9 132 aa9.29□□□□□ -0.92
Col1a1-201ENSMUST00000001547 Ankrd17Q99NH0 2603 aaKnown RBP9.28□□□□□ -0.92
Col1a1-201ENSMUST00000001547 Uqcr11Q9CPX8 56 aa9.28□□□□□ -0.92
Col1a1-201ENSMUST00000001547 AW011738F6S7Q2 159 aa9.26□□□□□ -0.93
Col1a1-201ENSMUST00000001547 Pla2g10Q9QXX3 151 aa9.26□□□□□ -0.93
Col1a1-201ENSMUST00000001547 Gm10643Q3URG9 111 aa9.24□□□□□ -0.93
Col1a1-201ENSMUST00000001547 UtrnE9Q6R7 3430 aa9.24□□□□□ -0.93
Col1a1-201ENSMUST00000001547 PolqQ8CGS6 2544 aa9.24□□□□□ -0.93
Col1a1-201ENSMUST00000001547 C530025M09RikF6RGA8 229 aa9.22□□□□□ -0.93
Col1a1-201ENSMUST00000001547 Lelp1Q9DAE3 120 aa9.2□□□□□ -0.94
Col1a1-201ENSMUST00000001547 CriptO70333 101 aa9.19□□□□□ -0.94
Col1a1-201ENSMUST00000001547 Myo18bE9PV66 2605 aa9.19□□□□□ -0.94
Col1a1-201ENSMUST00000001547 Cep350E9Q309 3095 aa9.17□□□□□ -0.94
Col1a1-201ENSMUST00000001547 Gm11565A2A4M7 156 aa9.16□□□□□ -0.94
Col1a1-201ENSMUST00000001547 Gm7276Q3TYW4 209 aa9.16□□□□□ -0.94
Col1a1-201ENSMUST00000001547 A330070K13RikQ8CA53 115 aa9.13□□□□□ -0.95
Col1a1-201ENSMUST00000001547 Cypt15B1AXS0 87 aa9.13□□□□□ -0.95
Col1a1-201ENSMUST00000001547 Defb9Q8R2I6 67 aa9.12□□□□□ -0.95
Col1a1-201ENSMUST00000001547 CicQ924A2 2510 aa9.1□□□□□ -0.95
Col1a1-201ENSMUST00000001547 Plac8Q9JI48 112 aa9.08□□□□□ -0.96
Col1a1-201ENSMUST00000001547 Gm11213A0A1B0GR83 88 aa9.07□□□□□ -0.96
Col1a1-201ENSMUST00000001547 Chtf8P0CG14 533 aa9.07□□□□□ -0.96
Col1a1-201ENSMUST00000001547 CnbpP53996 178 aaKnown RBP9.06□□□□□ -0.96
Col1a1-201ENSMUST00000001547 Gm7138L7N2C3 230 aa9.05□□□□□ -0.96
Col1a1-201ENSMUST00000001547 Gm3238W4VSP7 230 aa9.05□□□□□ -0.96
Col1a1-201ENSMUST00000001547 Gm21798J3QNU5 87 aa9.05□□□□□ -0.96
Col1a1-201ENSMUST00000001547 Anapc11Q9CPX9 84 aa9.04□□□□□ -0.96
Col1a1-201ENSMUST00000001547 TrioQ0KL02 3102 aa9.03□□□□□ -0.96
Col1a1-201ENSMUST00000001547 Usp9yF8VPU6 2556 aa9.02□□□□□ -0.97
Col1a1-201ENSMUST00000001547 Fam104aA2A6P4 185 aa9.02□□□□□ -0.97
Col1a1-201ENSMUST00000001547 Gm3880A0A1B0GSB3 72 aa9.01□□□□□ -0.97
Col1a1-201ENSMUST00000001547 Prune2Q52KR3 3084 aa9.01□□□□□ -0.97
Col1a1-201ENSMUST00000001547 OxtP35454 125 aa8.99□□□□□ -0.97
Col1a1-201ENSMUST00000001547 Zcchc13Q9D548 170 aa8.99□□□□□ -0.97
Col1a1-201ENSMUST00000001547 Nbeal1E9PYP2 2688 aa8.99□□□□□ -0.97
Col1a1-201ENSMUST00000001547 2310034C09RikQ9D746 214 aa8.99□□□□□ -0.97
Col1a1-201ENSMUST00000001547 Gm26620Q9CY65 116 aa8.98□□□□□ -0.97
Col1a1-201ENSMUST00000001547 Fam229bQ8CF36 80 aa8.96□□□□□ -0.98
Col1a1-201ENSMUST00000001547 FlnbQ80X90 2602 aaKnown RBP8.94□□□□□ -0.98
Col1a1-201ENSMUST00000001547 Gm7137J3QMW1 236 aa8.94□□□□□ -0.98
Col1a1-201ENSMUST00000001547 FlnaQ8BTM8 2647 aaKnown RBP8.94□□□□□ -0.98
Col1a1-201ENSMUST00000001547 Gcn1E9PVA8 2671 aaKnown RBP8.92□□□□□ -0.98
Col1a1-201ENSMUST00000001547 Smim29Q8R043 75 aa8.92□□□□□ -0.98
Col1a1-201ENSMUST00000001547 Gm9195A0A140LHT4 2805 aa8.92□□□□□ -0.98
Col1a1-201ENSMUST00000001547 Lama3Q61789 3330 aa8.92□□□□□ -0.98
Col1a1-201ENSMUST00000001547 Gm9955Q8CEJ8 102 aa8.91□□□□□ -0.98
Col1a1-201ENSMUST00000001547 Spink7Q6IE32 76 aa8.89□□□□□ -0.99
Col1a1-201ENSMUST00000001547 AtrQ9JKK8 2635 aa8.88□□□□□ -0.99
Col1a1-201ENSMUST00000001547 Jbts17Q8CE72 3214 aa8.86□□□□□ -0.99
Col1a1-201ENSMUST00000001547 Dmbt1Q60997 2085 aa8.86□□□□□ -0.99
Col1a1-201ENSMUST00000001547 Ankrd11E9Q4F7 2643 aa8.86□□□□□ -0.99
Col1a1-201ENSMUST00000001547 Hectd1Q69ZR2 2618 aaKnown RBP8.86□□□□□ -0.99
Col1a1-201ENSMUST00000001547 Lama2Q60675 3118 aaKnown RBP8.85□□□□□ -0.99
Col1a1-201ENSMUST00000001547 Nsd1O88491 2588 aaKnown RBP8.85□□□□□ -0.99
Col1a1-201ENSMUST00000001547 Tnrc18Q80WC3 2878 aa8.85□□□□□ -0.99
Col1a1-201ENSMUST00000001547 Cypt14J3QPF7 87 aa8.84□□□□□ -0.99
Col1a1-201ENSMUST00000001547 NbdyA0A0N4SUI7 68 aa8.83□□□□□ -1
Col1a1-201ENSMUST00000001547 Gm10065F6TJM2 114 aa8.82□□□□□ -1
Col1a1-201ENSMUST00000001547 Gm10320E9PW43 113 aa8.81□□□□□ -1
Col1a1-201ENSMUST00000001547 6030445D17RikE9Q8F9 148 aa8.81□□□□□ -1
Col1a1-201ENSMUST00000001547 FasnP19096 2504 aaKnown RBP8.8□□□□□ -1
Col1a1-201ENSMUST00000001547 Gm9821Q8K076 103 aa8.79□□□□□ -1
Col1a1-201ENSMUST00000001547 Col12a1Q60847 3120 aa8.78□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 146.2 ms