RNA–Protein interactions for RNA: ENSMUST00000119954.8

Pcf11-201, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcf11, Length 5,995 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-201ENSMUST00000119954 Cox6a2P43023 97 aa12.42□□□□□ -0.42
Pcf11-201ENSMUST00000119954 Wdr90Q6ZPG2 1874 aa12.42□□□□□ -0.42
Pcf11-201ENSMUST00000119954 Chchd10Q7TNL9 138 aa12.42□□□□□ -0.42
Pcf11-201ENSMUST00000119954 TectaO08523 2155 aa12.41□□□□□ -0.42
Pcf11-201ENSMUST00000119954 Mp68P56379 58 aa12.4□□□□□ -0.42
Pcf11-201ENSMUST00000119954 DscamQ9ERC8 2013 aa12.39□□□□□ -0.43
Pcf11-201ENSMUST00000119954 Ighv2-2A0A075B5P8 116 aa12.39□□□□□ -0.43
Pcf11-201ENSMUST00000119954 P01821 116 aa12.39□□□□□ -0.43
Pcf11-201ENSMUST00000119954 Fam19a3Q7TPG6 132 aa12.38□□□□□ -0.43
Pcf11-201ENSMUST00000119954 Gm10300Q8C8P7 189 aa12.38□□□□□ -0.43
Pcf11-201ENSMUST00000119954 Cd164l2Q9D6W7 172 aa12.37□□□□□ -0.43
Pcf11-201ENSMUST00000119954 Znf580Q9DB38 172 aa12.37□□□□□ -0.43
Pcf11-201ENSMUST00000119954 Defb45Q3V490 66 aa12.37□□□□□ -0.43
Pcf11-201ENSMUST00000119954 Msrb1Q9JLC3 116 aa12.36□□□□□ -0.43
Pcf11-201ENSMUST00000119954 2310034G01RikA0A286YDL3 209 aa12.36□□□□□ -0.43
Pcf11-201ENSMUST00000119954 BC067074F6RXI4 2391 aa12.36□□□□□ -0.43
Pcf11-201ENSMUST00000119954 3110070M22RikQ9DAQ7 118 aa12.36□□□□□ -0.43
Pcf11-201ENSMUST00000119954 Pcnx3Q8VI59 2028 aa12.35□□□□□ -0.43
Pcf11-201ENSMUST00000119954 Defb37Q7TMD2 62 aa12.33□□□□□ -0.44
Pcf11-201ENSMUST00000119954 Pcdh15Q99PJ1 1943 aa12.32□□□□□ -0.44
Pcf11-201ENSMUST00000119954 Prol1E9PYQ4 312 aa12.32□□□□□ -0.44
Pcf11-201ENSMUST00000119954 RetnlbQ99P86 105 aa12.32□□□□□ -0.44
Pcf11-201ENSMUST00000119954 Gm21886J3QJU9 214 aa12.31□□□□□ -0.44
Pcf11-201ENSMUST00000119954 1700018G05RikA0A1B0GSI2 66 aa12.31□□□□□ -0.44
Pcf11-201ENSMUST00000119954 Defb11Q8R2I7 77 aa12.31□□□□□ -0.44
Pcf11-201ENSMUST00000119954 AplnQ9R0R4 77 aa12.29□□□□□ -0.44
Pcf11-201ENSMUST00000119954 Srsf12Q8C8K3 266 aa12.28□□□□□ -0.44
Pcf11-201ENSMUST00000119954 A930002H24RikQ8C8Y3 163 aa12.28□□□□□ -0.44
Pcf11-201ENSMUST00000119954 Zfyve26Q5DU37 2529 aa12.28□□□□□ -0.44
Pcf11-201ENSMUST00000119954 Myo9aQ8C170 2542 aa12.28□□□□□ -0.44
Pcf11-201ENSMUST00000119954 Gm10999F6Q4M4 69 aa12.28□□□□□ -0.44
Pcf11-201ENSMUST00000119954 Igkv8-27A0A0G2JF28 120 aa12.27□□□□□ -0.45
Pcf11-201ENSMUST00000119954 Gm10642Q3TWM1 71 aa12.27□□□□□ -0.45
Pcf11-201ENSMUST00000119954 Defb50Q6TU36 73 aa12.27□□□□□ -0.45
Pcf11-201ENSMUST00000119954 Gm20661K7N787 53 aa12.26□□□□□ -0.45
Pcf11-201ENSMUST00000119954 Znf414Q9DCK4 299 aa12.26□□□□□ -0.45
Pcf11-201ENSMUST00000119954 Adamts20P59511 1906 aa12.25□□□□□ -0.45
Pcf11-201ENSMUST00000119954 Rif1Q6PR54 2419 aaKnown RBP12.25□□□□□ -0.45
Pcf11-201ENSMUST00000119954 AI854703Q8BIN3 203 aa12.24□□□□□ -0.45
Pcf11-201ENSMUST00000119954 Hivep2Q3UHF7 2430 aa12.24□□□□□ -0.45
Pcf11-201ENSMUST00000119954 Gm5464Q3UY29 175 aa12.23□□□□□ -0.45
Pcf11-201ENSMUST00000119954 Prr9Q8BV84 116 aa12.23□□□□□ -0.45
Pcf11-201ENSMUST00000119954 Gm43218A0A0G2JGT0 114 aa12.22□□□□□ -0.45
Pcf11-201ENSMUST00000119954 Gm44790A0A0N4SV91 103 aa12.22□□□□□ -0.45
Pcf11-201ENSMUST00000119954 Prr13Q9CQJ5 137 aa12.2□□□□□ -0.46
Pcf11-201ENSMUST00000119954 OtoglF7A4A7 2325 aa12.19□□□□□ -0.46
Pcf11-201ENSMUST00000119954 Elof1P60003 83 aa12.19□□□□□ -0.46
Pcf11-201ENSMUST00000119954 4930507D05RikQ8C9C9 103 aa12.18□□□□□ -0.46
Pcf11-201ENSMUST00000119954 Cdc42se1Q8BHL7 80 aa12.17□□□□□ -0.46
Pcf11-201ENSMUST00000119954 Gm9903Q8C9Y8 129 aa12.16□□□□□ -0.46
Pcf11-201ENSMUST00000119954 AI606181Q8C7B9 129 aa12.16□□□□□ -0.46
Pcf11-201ENSMUST00000119954 Dmac1Q9CQ00 111 aa12.15□□□□□ -0.46
Pcf11-201ENSMUST00000119954 Gm11627A6PWP4 55 aa12.15□□□□□ -0.46
Pcf11-201ENSMUST00000119954 Abca2P41234 2434 aa12.15□□□□□ -0.46
Pcf11-201ENSMUST00000119954 7530416G11RikJ3QJX6 159 aa12.15□□□□□ -0.46
Pcf11-201ENSMUST00000119954 Gm10308Q9CVR5 141 aa12.15□□□□□ -0.46
Pcf11-201ENSMUST00000119954 Coa5Q99M07 74 aa12.13□□□□□ -0.47
Pcf11-201ENSMUST00000119954 Notch2O35516 2470 aa12.12□□□□□ -0.47
Pcf11-201ENSMUST00000119954 CrygaP04345 174 aa12.12□□□□□ -0.47
Pcf11-201ENSMUST00000119954 MobpQ9D2P8 170 aa12.11□□□□□ -0.47
Pcf11-201ENSMUST00000119954 Q8BGJ3 129 aa12.11□□□□□ -0.47
Pcf11-201ENSMUST00000119954 Gm10770F7D043 238 aa12.09□□□□□ -0.47
Pcf11-201ENSMUST00000119954 Gpr15lA0A0B4J1N3 78 aa12.08□□□□□ -0.48
Pcf11-201ENSMUST00000119954 Gm10643Q3URG9 111 aa12.07□□□□□ -0.48
Pcf11-201ENSMUST00000119954 Defb1P56386 69 aa12.05□□□□□ -0.48
Pcf11-201ENSMUST00000119954 Spaca4Q80ZQ0 127 aa12.05□□□□□ -0.48
Pcf11-201ENSMUST00000119954 Ttc28Q80XJ3 2450 aa12.04□□□□□ -0.48
Pcf11-201ENSMUST00000119954 Phxr4P15974 95 aa12.04□□□□□ -0.48
Pcf11-201ENSMUST00000119954 Gm17689B3GLJ4 109 aa12.04□□□□□ -0.48
Pcf11-201ENSMUST00000119954 Rpl37aP61514 92 aa12.04□□□□□ -0.48
Pcf11-201ENSMUST00000119954 Pkd1l2Q7TN88 2461 aa12.03□□□□□ -0.48
Pcf11-201ENSMUST00000119954 1810062G17RikG3X8Y2 129 aa12.02□□□□□ -0.48
Pcf11-201ENSMUST00000119954 Gm3285A0A1W2P7U0 201 aa12□□□□□ -0.49
Pcf11-201ENSMUST00000119954 Ankhd1E9PUR0 2548 aaKnown RBP12□□□□□ -0.49
Pcf11-201ENSMUST00000119954 Gm20538F6Z9R1 75 aa11.99□□□□□ -0.49
Pcf11-201ENSMUST00000119954 E130208F15RikQ3UPV3 143 aa11.98□□□□□ -0.49
Pcf11-201ENSMUST00000119954 Phf5aP83870 110 aaKnown RBP11.98□□□□□ -0.49
Pcf11-201ENSMUST00000119954 Alms1Q8K4E0 3251 aa11.98□□□□□ -0.49
Pcf11-201ENSMUST00000119954 PolqQ8CGS6 2544 aa11.97□□□□□ -0.49
Pcf11-201ENSMUST00000119954 Gm16181B0V2H2 73 aa11.97□□□□□ -0.49
Pcf11-201ENSMUST00000119954 Phxr5P08399 672 aa11.97□□□□□ -0.49
Pcf11-201ENSMUST00000119954 Gm3250E9Q1M3 230 aa11.96□□□□□ -0.49
Pcf11-201ENSMUST00000119954 Uqcr11Q9CPX8 56 aa11.95□□□□□ -0.5
Pcf11-201ENSMUST00000119954 Rnase13Q5GAM7 153 aa11.95□□□□□ -0.5
Pcf11-201ENSMUST00000119954 Q8BT88 171 aa11.93□□□□□ -0.5
Pcf11-201ENSMUST00000119954 Kiaa1549Q68FD9 1940 aa11.93□□□□□ -0.5
Pcf11-201ENSMUST00000119954 Gm26661M0QWV4 156 aa11.93□□□□□ -0.5
Pcf11-201ENSMUST00000119954 Gm5617Q91VN2 117 aa11.92□□□□□ -0.5
Pcf11-201ENSMUST00000119954 Lrrk2Q5S006 2527 aa11.92□□□□□ -0.5
Pcf11-201ENSMUST00000119954 PtprbB2RU80 1998 aa11.92□□□□□ -0.5
Pcf11-201ENSMUST00000119954 Flg2Q2VIS4 2362 aa11.92□□□□□ -0.5
Pcf11-201ENSMUST00000119954 Gm10837Q3UTT8 145 aa11.9□□□□□ -0.5
Pcf11-201ENSMUST00000119954 Psors1c2Q80ZC9 134 aa11.9□□□□□ -0.51
Pcf11-201ENSMUST00000119954 Hcfc1Q61191 2045 aaKnown RBP11.89□□□□□ -0.51
Pcf11-201ENSMUST00000119954 Pla2g10Q9QXX3 151 aa11.88□□□□□ -0.51
Pcf11-201ENSMUST00000119954 Gm27235Q3UW50 83 aa11.86□□□□□ -0.51
Pcf11-201ENSMUST00000119954 Pcsk5Q04592 1877 aa11.85□□□□□ -0.51
Pcf11-201ENSMUST00000119954 Tns1E9Q0S6 1888 aaKnown RBP11.85□□□□□ -0.51
Pcf11-201ENSMUST00000119954 Snhg11Q4G0K9 87 aa11.85□□□□□ -0.51
Pcf11-201ENSMUST00000119954 Gm9573F7C950 1606 aa11.83□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 88.2 ms