RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Tmem223Q9CQE2 199 aaKnown RBP7.65□□□□□ -1.18
Prpf40b-202ENSMUST00000118287 Fbn1Q61554 2873 aaKnown RBP7.65□□□□□ -1.19
Prpf40b-202ENSMUST00000118287 Trav9d-3A0A075B695 113 aa7.63□□□□□ -1.19
Prpf40b-202ENSMUST00000118287 Gm10647E9Q8X0 124 aa7.63□□□□□ -1.19
Prpf40b-202ENSMUST00000118287 P01745 121 aa7.63□□□□□ -1.19
Prpf40b-202ENSMUST00000118287 Igkv6-13A0A0G2JGY3 119 aa7.63□□□□□ -1.19
Prpf40b-202ENSMUST00000118287 Ndufa12Q7TMF3 145 aaKnown RBP7.63□□□□□ -1.19
Prpf40b-202ENSMUST00000118287 A930002H24RikQ8C8Y3 163 aa7.63□□□□□ -1.19
Prpf40b-202ENSMUST00000118287 Bles03Q8VD62 251 aa7.63□□□□□ -1.19
Prpf40b-202ENSMUST00000118287 Trav11A0A0B4J1J9 114 aa7.63□□□□□ -1.19
Prpf40b-202ENSMUST00000118287 1700042G07RikB1AUF7 90 aa7.63□□□□□ -1.19
Prpf40b-202ENSMUST00000118287 Cd99Q8VCN6 175 aa7.63□□□□□ -1.19
Prpf40b-202ENSMUST00000118287 CicQ924A2 2510 aa7.62□□□□□ -1.19
Prpf40b-202ENSMUST00000118287 Rpl36aP83882 106 aaKnown RBP7.62□□□□□ -1.19
Prpf40b-202ENSMUST00000118287 Gm3443F7CCV5 94 aa7.62□□□□□ -1.19
Prpf40b-202ENSMUST00000118287 Sh2d1aO88890 126 aa7.62□□□□□ -1.19
Prpf40b-202ENSMUST00000118287 Hist1h4aP62806 103 aaKnown RBP7.62□□□□□ -1.19
Prpf40b-202ENSMUST00000118287 Ighv8-11A0A075B5X4 119 aa7.61□□□□□ -1.19
Prpf40b-202ENSMUST00000118287 AtrQ9JKK8 2635 aa7.6□□□□□ -1.19
Prpf40b-202ENSMUST00000118287 Gm8439G3UWA7 96 aa7.6□□□□□ -1.19
Prpf40b-202ENSMUST00000118287 PrlhG3UWC3 86 aa7.6□□□□□ -1.19
Prpf40b-202ENSMUST00000118287 Nop10Q9CQS2 64 aa7.6□□□□□ -1.19
Prpf40b-202ENSMUST00000118287 4930535I16RikQ9CUI2 172 aa7.6□□□□□ -1.19
Prpf40b-202ENSMUST00000118287 Inafm2A0A1L1STD6 152 aa7.6□□□□□ -1.19
Prpf40b-202ENSMUST00000118287 Cdc42se2Q8BGH7 84 aa7.6□□□□□ -1.19
Prpf40b-202ENSMUST00000118287 Igkv1-117A0A140T8M0 119 aa7.59□□□□□ -1.19
Prpf40b-202ENSMUST00000118287 Plac8l1Q08EJ0 177 aa7.59□□□□□ -1.19
Prpf40b-202ENSMUST00000118287 Q99M08 65 aa7.59□□□□□ -1.19
Prpf40b-202ENSMUST00000118287 Hivep3A2A884 2348 aa7.59□□□□□ -1.19
Prpf40b-202ENSMUST00000118287 Ighv1-49A0A0A6YWX2 117 aa7.59□□□□□ -1.19
Prpf40b-202ENSMUST00000118287 Dnal4Q9DCM4 105 aa7.59□□□□□ -1.19
Prpf40b-202ENSMUST00000118287 Vmo1Q5SXG7 201 aa7.58□□□□□ -1.2
Prpf40b-202ENSMUST00000118287 4930524J08RikQ9CUJ5 163 aa7.58□□□□□ -1.2
Prpf40b-202ENSMUST00000118287 Gm7075D3Z497 112 aa7.58□□□□□ -1.2
Prpf40b-202ENSMUST00000118287 Tfpi2O35536 230 aa7.58□□□□□ -1.2
Prpf40b-202ENSMUST00000118287 Rnase1P00683 149 aa7.58□□□□□ -1.2
Prpf40b-202ENSMUST00000118287 P01755 137 aa7.58□□□□□ -1.2
Prpf40b-202ENSMUST00000118287 Cox6b1P56391 86 aaKnown RBP7.58□□□□□ -1.2
Prpf40b-202ENSMUST00000118287 Gm9767G3X930 207 aa7.58□□□□□ -1.2
Prpf40b-202ENSMUST00000118287 Itpr2Q9Z329 2701 aa7.57□□□□□ -1.2
Prpf40b-202ENSMUST00000118287 NipblQ6KCD5 2798 aaKnown RBP7.57□□□□□ -1.2
Prpf40b-202ENSMUST00000118287 Fam104aA2A6P4 185 aa7.57□□□□□ -1.2
Prpf40b-202ENSMUST00000118287 Gm10577Q3UDV9 132 aa7.56□□□□□ -1.2
Prpf40b-202ENSMUST00000118287 MplkipQ9D011 178 aa7.56□□□□□ -1.2
Prpf40b-202ENSMUST00000118287 Tomm7Q9D173 55 aa7.56□□□□□ -1.2
Prpf40b-202ENSMUST00000118287 Krtap16-1A2A5X5 502 aa7.56□□□□□ -1.2
Prpf40b-202ENSMUST00000118287 Prh1P05142 261 aa7.56□□□□□ -1.2
Prpf40b-202ENSMUST00000118287 Vpreb2P13373 142 aa7.56□□□□□ -1.2
Prpf40b-202ENSMUST00000118287 Ppp1r32Q148A4 427 aa7.55□□□□□ -1.2
Prpf40b-202ENSMUST00000118287 4930546C10RikE9Q4Y3 121 aa7.55□□□□□ -1.2
Prpf40b-202ENSMUST00000118287 Gm16381A0A1Y7VKT9 73 aa7.54□□□□□ -1.2
Prpf40b-202ENSMUST00000118287 BikO70337 150 aa7.54□□□□□ -1.2
Prpf40b-202ENSMUST00000118287 Defb42Q8BVB5 75 aa7.54□□□□□ -1.2
Prpf40b-202ENSMUST00000118287 Nsd1O88491 2588 aaKnown RBP7.54□□□□□ -1.2
Prpf40b-202ENSMUST00000118287 Rpl28P41105 137 aaKnown RBP7.54□□□□□ -1.2
Prpf40b-202ENSMUST00000118287 Spink8Q09TK9 105 aa7.53□□□□□ -1.2
Prpf40b-202ENSMUST00000118287 Gm10549Q3URY4 149 aa7.53□□□□□ -1.2
Prpf40b-202ENSMUST00000118287 Cystm1Q8K353 104 aa7.53□□□□□ -1.2
Prpf40b-202ENSMUST00000118287 Hivep1Q03172 2688 aa7.53□□□□□ -1.2
Prpf40b-202ENSMUST00000118287 Lypd5Q9D7Z7 256 aa7.52□□□□□ -1.21
Prpf40b-202ENSMUST00000118287 Hspg2Q05793 3707 aaKnown RBP7.52□□□□□ -1.21
Prpf40b-202ENSMUST00000118287 Smim26Q3V460 107 aa7.52□□□□□ -1.21
Prpf40b-202ENSMUST00000118287 Igkv1-99F6XWB2 120 aa7.51□□□□□ -1.21
Prpf40b-202ENSMUST00000118287 Tex15F8VPN2 2785 aa7.51□□□□□ -1.21
Prpf40b-202ENSMUST00000118287 Znf414Q9DCK4 299 aa7.5□□□□□ -1.21
Prpf40b-202ENSMUST00000118287 4930519P11RikQ9CUJ8 166 aa7.49□□□□□ -1.21
Prpf40b-202ENSMUST00000118287 Gm26620Q9CY65 116 aa7.49□□□□□ -1.21
Prpf40b-202ENSMUST00000118287 Igkv2-109A0A075B5K6 120 aa7.49□□□□□ -1.21
Prpf40b-202ENSMUST00000118287 Krtap24-1G3X9A2 248 aa7.49□□□□□ -1.21
Prpf40b-202ENSMUST00000118287 Acyp1P56376 99 aa7.49□□□□□ -1.21
Prpf40b-202ENSMUST00000118287 Defb50Q6TU36 73 aa7.49□□□□□ -1.21
Prpf40b-202ENSMUST00000118287 Fn1P11276 2477 aaKnown RBP7.48□□□□□ -1.21
Prpf40b-202ENSMUST00000118287 Gm17521F6QAC8 156 aa7.48□□□□□ -1.21
Prpf40b-202ENSMUST00000118287 Zfand2aQ9JII7 171 aa7.47□□□□□ -1.21
Prpf40b-202ENSMUST00000118287 Stab1Q8R4Y4 2571 aa7.47□□□□□ -1.21
Prpf40b-202ENSMUST00000118287 Klk12B2RVZ0 247 aa7.47□□□□□ -1.21
Prpf40b-202ENSMUST00000118287 Gm10772F7AIG4 85 aa7.47□□□□□ -1.21
Prpf40b-202ENSMUST00000118287 Reg3bP35230 175 aa7.47□□□□□ -1.21
Prpf40b-202ENSMUST00000118287 Gm5142Q8C5X9 133 aa7.47□□□□□ -1.21
Prpf40b-202ENSMUST00000118287 2010109I03RikQ9CQ11 111 aa7.47□□□□□ -1.21
Prpf40b-202ENSMUST00000118287 Rpl39lQ9CQD0 51 aa7.47□□□□□ -1.21
Prpf40b-202ENSMUST00000118287 Ube2d4D3YUH6 135 aa7.46□□□□□ -1.21
Prpf40b-202ENSMUST00000118287 MobpQ9D2P8 170 aa7.46□□□□□ -1.21
Prpf40b-202ENSMUST00000118287 Tenm1Q9WTS4 2731 aa7.46□□□□□ -1.22
Prpf40b-202ENSMUST00000118287 Igkv3-10A0A0G2JGN0 119 aa7.46□□□□□ -1.22
Prpf40b-202ENSMUST00000118287 1810062G17RikG3X8Y2 129 aa7.46□□□□□ -1.22
Prpf40b-202ENSMUST00000118287 Tmem254aP0DN89 123 aa7.45□□□□□ -1.22
Prpf40b-202ENSMUST00000118287 Tmem254bP0DN90 123 aa7.45□□□□□ -1.22
Prpf40b-202ENSMUST00000118287 Tmem254cP0DN91 123 aa7.45□□□□□ -1.22
Prpf40b-202ENSMUST00000118287 CnbpP53996 178 aaKnown RBP7.45□□□□□ -1.22
Prpf40b-202ENSMUST00000118287 Chchd7Q8K2Q5 85 aa7.45□□□□□ -1.22
Prpf40b-202ENSMUST00000118287 Ighv2-9-1A0A075B697 116 aa7.44□□□□□ -1.22
Prpf40b-202ENSMUST00000118287 Pla2g1bQ9Z0Y2 146 aa7.44□□□□□ -1.22
Prpf40b-202ENSMUST00000118287 Nbeal2Q6ZQA0 2742 aa7.43□□□□□ -1.22
Prpf40b-202ENSMUST00000118287 Ufsp1Q9CZP0 217 aa7.43□□□□□ -1.22
Prpf40b-202ENSMUST00000118287 Notch2O35516 2470 aa7.43□□□□□ -1.22
Prpf40b-202ENSMUST00000118287 Ighv1-56A0A0A6YXG2 117 aa7.43□□□□□ -1.22
Prpf40b-202ENSMUST00000118287 EnhoQ8K1D8 76 aa7.43□□□□□ -1.22
Prpf40b-202ENSMUST00000118287 Gpha2Q925Q5 128 aa7.43□□□□□ -1.22
Prpf40b-202ENSMUST00000118287 Gm10845Q3UNY9 185 aa7.42□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 304.9 ms