RNA–Protein interactions for RNA: ENSMUST00000113051.8

Shroom3-201, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-201ENSMUST00000113051 AI606181Q8C7B9 129 aa11.72□□□□□ -0.53
Shroom3-201ENSMUST00000113051 Bean1Q9EQG5 255 aa11.71□□□□□ -0.53
Shroom3-201ENSMUST00000113051 Flg2Q2VIS4 2362 aa11.7□□□□□ -0.54
Shroom3-201ENSMUST00000113051 UqcrqQ9CQ69 82 aa11.7□□□□□ -0.54
Shroom3-201ENSMUST00000113051 Gm9903Q8C9Y8 129 aa11.69□□□□□ -0.54
Shroom3-201ENSMUST00000113051 Phf5aP83870 110 aaKnown RBP11.69□□□□□ -0.54
Shroom3-201ENSMUST00000113051 CnfnQ6PCW6 111 aa11.68□□□□□ -0.54
Shroom3-201ENSMUST00000113051 Gm10135F6TEE5 83 aa11.66□□□□□ -0.54
Shroom3-201ENSMUST00000113051 Defb50Q6TU36 73 aa11.66□□□□□ -0.54
Shroom3-201ENSMUST00000113051 Rtl10D3YWW5 146 aa11.66□□□□□ -0.54
Shroom3-201ENSMUST00000113051 Znf580Q9DB38 172 aa11.66□□□□□ -0.54
Shroom3-201ENSMUST00000113051 Defb1P56386 69 aa11.65□□□□□ -0.54
Shroom3-201ENSMUST00000113051 Spaca4Q80ZQ0 127 aa11.65□□□□□ -0.54
Shroom3-201ENSMUST00000113051 Gm10845Q3UNY9 185 aa11.65□□□□□ -0.54
Shroom3-201ENSMUST00000113051 Gm10999F6Q4M4 69 aa11.65□□□□□ -0.54
Shroom3-201ENSMUST00000113051 Gpr15lA0A0B4J1N3 78 aa11.64□□□□□ -0.55
Shroom3-201ENSMUST00000113051 Krtap24-1G3X9A2 248 aa11.64□□□□□ -0.55
Shroom3-201ENSMUST00000113051 Lrrk2Q5S006 2527 aa11.63□□□□□ -0.55
Shroom3-201ENSMUST00000113051 Ighv2-5A0A0A6YY69 116 aa11.63□□□□□ -0.55
Shroom3-201ENSMUST00000113051 Notch2O35516 2470 aa11.63□□□□□ -0.55
Shroom3-201ENSMUST00000113051 Prol1E9PYQ4 312 aa11.63□□□□□ -0.55
Shroom3-201ENSMUST00000113051 Col27a1Q5QNQ9 1845 aa11.63□□□□□ -0.55
Shroom3-201ENSMUST00000113051 Gm5617Q91VN2 117 aa11.62□□□□□ -0.55
Shroom3-201ENSMUST00000113051 Gm9573F7C950 1606 aa11.62□□□□□ -0.55
Shroom3-201ENSMUST00000113051 SnurfQ9WU12 71 aa11.61□□□□□ -0.55
Shroom3-201ENSMUST00000113051 Mrpl34Q99N91 92 aa11.6□□□□□ -0.55
Shroom3-201ENSMUST00000113051 B430305J03RikQ8BQQ8 176 aa11.59□□□□□ -0.55
Shroom3-201ENSMUST00000113051 P01819 144 aa11.59□□□□□ -0.55
Shroom3-201ENSMUST00000113051 Defb45Q3V490 66 aa11.59□□□□□ -0.55
Shroom3-201ENSMUST00000113051 6430550D23RikE9Q1X6 194 aa11.59□□□□□ -0.55
Shroom3-201ENSMUST00000113051 Gm10337F7DEP7 55 aa11.59□□□□□ -0.55
Shroom3-201ENSMUST00000113051 Snhg11Q4G0K9 87 aa11.59□□□□□ -0.55
Shroom3-201ENSMUST00000113051 Nav3Q80TN7 2359 aa11.59□□□□□ -0.55
Shroom3-201ENSMUST00000113051 Spink13Q3UTS8 97 aa11.57□□□□□ -0.56
Shroom3-201ENSMUST00000113051 Chchd10Q7TNL9 138 aa11.57□□□□□ -0.56
Shroom3-201ENSMUST00000113051 Q9DAB9 146 aa11.57□□□□□ -0.56
Shroom3-201ENSMUST00000113051 E130208F15RikQ3UPV3 143 aa11.56□□□□□ -0.56
Shroom3-201ENSMUST00000113051 Gm16181B0V2H2 73 aa11.55□□□□□ -0.56
Shroom3-201ENSMUST00000113051 2310034G01RikA0A286YDL3 209 aa11.55□□□□□ -0.56
Shroom3-201ENSMUST00000113051 Cox6a2P43023 97 aa11.55□□□□□ -0.56
Shroom3-201ENSMUST00000113051 Piezo1E2JF22 2547 aa11.54□□□□□ -0.56
Shroom3-201ENSMUST00000113051 Znf414Q9DCK4 299 aa11.54□□□□□ -0.56
Shroom3-201ENSMUST00000113051 Col5a1O88207 1838 aa11.54□□□□□ -0.56
Shroom3-201ENSMUST00000113051 Gm3233E9Q2H5 230 aa11.53□□□□□ -0.56
Shroom3-201ENSMUST00000113051 Msrb1Q9JLC3 116 aa11.53□□□□□ -0.56
Shroom3-201ENSMUST00000113051 Rpl37aP61514 92 aa11.52□□□□□ -0.57
Shroom3-201ENSMUST00000113051 Ttc28Q80XJ3 2450 aa11.51□□□□□ -0.57
Shroom3-201ENSMUST00000113051 Sptbn4E9PX29 2561 aa11.5□□□□□ -0.57
Shroom3-201ENSMUST00000113051 A930002H24RikQ8C8Y3 163 aa11.5□□□□□ -0.57
Shroom3-201ENSMUST00000113051 Gm10837Q3UTT8 145 aa11.48□□□□□ -0.57
Shroom3-201ENSMUST00000113051 Gm12216A0A1W2P827 62 aa11.48□□□□□ -0.57
Shroom3-201ENSMUST00000113051 Fam168bQ80XQ8 194 aa11.48□□□□□ -0.57
Shroom3-201ENSMUST00000113051 Gm44790A0A0N4SV91 103 aa11.47□□□□□ -0.57
Shroom3-201ENSMUST00000113051 Spata3Q9D9T6 193 aa11.47□□□□□ -0.57
Shroom3-201ENSMUST00000113051 Gm21886J3QJU9 214 aa11.47□□□□□ -0.57
Shroom3-201ENSMUST00000113051 Ankhd1E9PUR0 2548 aaKnown RBP11.46□□□□□ -0.57
Shroom3-201ENSMUST00000113051 Gm10549Q3URY4 149 aa11.46□□□□□ -0.57
Shroom3-201ENSMUST00000113051 Piezo2Q8CD54 2822 aa11.46□□□□□ -0.58
Shroom3-201ENSMUST00000113051 Gm19935A0A1B0GSF9 52 aa11.46□□□□□ -0.58
Shroom3-201ENSMUST00000113051 Chd8Q09XV5 2582 aaKnown RBP11.45□□□□□ -0.58
Shroom3-201ENSMUST00000113051 Igkv8-27A0A0G2JF28 120 aa11.44□□□□□ -0.58
Shroom3-201ENSMUST00000113051 BC025920Q3US60 128 aa11.44□□□□□ -0.58
Shroom3-201ENSMUST00000113051 Dmac1Q9CQ00 111 aa11.42□□□□□ -0.58
Shroom3-201ENSMUST00000113051 Gm11627A6PWP4 55 aa11.41□□□□□ -0.58
Shroom3-201ENSMUST00000113051 Fam19a3Q7TPG6 132 aa11.4□□□□□ -0.58
Shroom3-201ENSMUST00000113051 Gm43218A0A0G2JGT0 114 aa11.4□□□□□ -0.59
Shroom3-201ENSMUST00000113051 Gm10160F6Y577 67 aa11.39□□□□□ -0.59
Shroom3-201ENSMUST00000113051 Tln1P26039 2541 aaKnown RBP11.39□□□□□ -0.59
Shroom3-201ENSMUST00000113051 AplnQ9R0R4 77 aa11.39□□□□□ -0.59
Shroom3-201ENSMUST00000113051 CrygaP04345 174 aa11.37□□□□□ -0.59
Shroom3-201ENSMUST00000113051 Gm10197F6QEY5 67 aa11.34□□□□□ -0.59
Shroom3-201ENSMUST00000113051 Sostdc1Q9CQN4 206 aa11.33□□□□□ -0.6
Shroom3-201ENSMUST00000113051 MobpQ9D2P8 170 aa11.33□□□□□ -0.6
Shroom3-201ENSMUST00000113051 3110070M22RikQ9DAQ7 118 aa11.33□□□□□ -0.6
Shroom3-201ENSMUST00000113051 Gm20661K7N787 53 aa11.33□□□□□ -0.6
Shroom3-201ENSMUST00000113051 Gm10770F7D043 238 aa11.32□□□□□ -0.6
Shroom3-201ENSMUST00000113051 Hivep3A2A884 2348 aa11.32□□□□□ -0.6
Shroom3-201ENSMUST00000113051 Elof1P60003 83 aa11.32□□□□□ -0.6
Shroom3-201ENSMUST00000113051 Q8BGJ3 129 aa11.32□□□□□ -0.6
Shroom3-201ENSMUST00000113051 Csdc2Q91YQ3 154 aa11.31□□□□□ -0.6
Shroom3-201ENSMUST00000113051 Krtap11-1E9Q2E9 183 aa11.3□□□□□ -0.6
Shroom3-201ENSMUST00000113051 Coa6Q8BGD8 79 aa11.29□□□□□ -0.6
Shroom3-201ENSMUST00000113051 4930518I15RikQ3V2W7 57 aa11.29□□□□□ -0.6
Shroom3-201ENSMUST00000113051 Q8BT88 171 aa11.28□□□□□ -0.6
Shroom3-201ENSMUST00000113051 Ighv2-2A0A075B5P8 116 aa11.27□□□□□ -0.61
Shroom3-201ENSMUST00000113051 P01821 116 aa11.27□□□□□ -0.61
Shroom3-201ENSMUST00000113051 Gm27235Q3UW50 83 aa11.26□□□□□ -0.61
Shroom3-201ENSMUST00000113051 Anapc11Q9CPX9 84 aa11.25□□□□□ -0.61
Shroom3-201ENSMUST00000113051 7530416G11RikJ3QJX6 159 aa11.25□□□□□ -0.61
Shroom3-201ENSMUST00000113051 Phxr5P08399 672 aa11.25□□□□□ -0.61
Shroom3-201ENSMUST00000113051 Gm7138L7N2C3 230 aa11.24□□□□□ -0.61
Shroom3-201ENSMUST00000113051 Gm3238W4VSP7 230 aa11.24□□□□□ -0.61
Shroom3-201ENSMUST00000113051 Plac8Q9JI48 112 aa11.24□□□□□ -0.61
Shroom3-201ENSMUST00000113051 Gm10772F7AIG4 85 aa11.23□□□□□ -0.61
Shroom3-201ENSMUST00000113051 4930507D05RikQ8C9C9 103 aa11.22□□□□□ -0.61
Shroom3-201ENSMUST00000113051 Gm26661M0QWV4 156 aa11.22□□□□□ -0.61
Shroom3-201ENSMUST00000113051 PtprqP0C5E4 2300 aa11.21□□□□□ -0.61
Shroom3-201ENSMUST00000113051 Zfp462B1AWL2 2495 aaKnown RBP11.21□□□□□ -0.61
Shroom3-201ENSMUST00000113051 Gm7137J3QMW1 236 aa11.21□□□□□ -0.62
Shroom3-201ENSMUST00000113051 Gm17689B3GLJ4 109 aa11.2□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 93.2 ms