RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Gm9903Q8C9Y8 129 aa13.98□□□□□ -0.17
Ccdc88a-202ENSMUST00000109477 2310009B15RikA0A0A6YWI4 143 aa13.98□□□□□ -0.17
Ccdc88a-202ENSMUST00000109477 Lage3Q9CR70 148 aa13.98□□□□□ -0.17
Ccdc88a-202ENSMUST00000109477 Lst1O08843 95 aa13.97□□□□□ -0.17
Ccdc88a-202ENSMUST00000109477 A730009L09RikA0A1B0GS82 72 aa13.96□□□□□ -0.17
Ccdc88a-202ENSMUST00000109477 9430015G10RikA2ASP7 199 aa13.96□□□□□ -0.17
Ccdc88a-202ENSMUST00000109477 AY074887Q8R5F9 132 aa13.96□□□□□ -0.17
Ccdc88a-202ENSMUST00000109477 Hrct1Q9D6B9 109 aa13.96□□□□□ -0.17
Ccdc88a-202ENSMUST00000109477 Igkv4-92A0A0B4J1I2 117 aa13.95□□□□□ -0.18
Ccdc88a-202ENSMUST00000109477 MturnQ8CGA4 131 aa13.95□□□□□ -0.18
Ccdc88a-202ENSMUST00000109477 Igkv8-16A0A0G2JDG9 121 aa13.95□□□□□ -0.18
Ccdc88a-202ENSMUST00000109477 Sprr4Q8CGN8 76 aa13.95□□□□□ -0.18
Ccdc88a-202ENSMUST00000109477 Ccl25O35903 144 aa13.94□□□□□ -0.18
Ccdc88a-202ENSMUST00000109477 Ube2wQ8VDW4 151 aa13.94□□□□□ -0.18
Ccdc88a-202ENSMUST00000109477 MalO09198 153 aa13.93□□□□□ -0.18
Ccdc88a-202ENSMUST00000109477 Defa13P50711 93 aa13.93□□□□□ -0.18
Ccdc88a-202ENSMUST00000109477 Ube2v1Q9CZY3 147 aa13.93□□□□□ -0.18
Ccdc88a-202ENSMUST00000109477 Trav13-2A0A075B649 110 aa13.93□□□□□ -0.18
Ccdc88a-202ENSMUST00000109477 Rpl32-psP17932 135 aa13.93□□□□□ -0.18
Ccdc88a-202ENSMUST00000109477 Camk2n2Q78WH7 79 aa13.93□□□□□ -0.18
Ccdc88a-202ENSMUST00000109477 Tcl1b3P56842 122 aa13.92□□□□□ -0.18
Ccdc88a-202ENSMUST00000109477 Rpl13aP19253 203 aaKnown RBP13.91□□□□□ -0.18
Ccdc88a-202ENSMUST00000109477 Gm28269A0A087WSG3 125 aa13.9□□□□□ -0.18
Ccdc88a-202ENSMUST00000109477 MifP34884 115 aaKnown RBP13.9□□□□□ -0.18
Ccdc88a-202ENSMUST00000109477 Defa16P50714 93 aa13.9□□□□□ -0.18
Ccdc88a-202ENSMUST00000109477 Wdr38Q9D994 303 aa13.9□□□□□ -0.18
Ccdc88a-202ENSMUST00000109477 Dnah7cA0A087WR13 4024 aa13.9□□□□□ -0.18
Ccdc88a-202ENSMUST00000109477 Igkv3-12A0A140T8P0 119 aa13.9□□□□□ -0.18
Ccdc88a-202ENSMUST00000109477 Gm10518F6UQQ9 182 aa13.9□□□□□ -0.18
Ccdc88a-202ENSMUST00000109477 Hbb-b2P02089 147 aa13.9□□□□□ -0.18
Ccdc88a-202ENSMUST00000109477 Ly6hQ9WUC3 139 aa13.9□□□□□ -0.18
Ccdc88a-202ENSMUST00000109477 Wfdc12Q9JHY3 85 aa13.89□□□□□ -0.19
Ccdc88a-202ENSMUST00000109477 Gm10549Q3URY4 149 aa13.88□□□□□ -0.19
Ccdc88a-202ENSMUST00000109477 Try10Q792Z1 246 aaKnown RBP13.88□□□□□ -0.19
Ccdc88a-202ENSMUST00000109477 Ufsp1Q9CZP0 217 aa13.88□□□□□ -0.19
Ccdc88a-202ENSMUST00000109477 Trav14-1A0A0G2JF94 121 aa13.87□□□□□ -0.19
Ccdc88a-202ENSMUST00000109477 CnbpP53996 178 aaKnown RBP13.87□□□□□ -0.19
Ccdc88a-202ENSMUST00000109477 BaalcQ8VHV1 145 aa13.87□□□□□ -0.19
Ccdc88a-202ENSMUST00000109477 Reg3dQ9QUS9 175 aa13.87□□□□□ -0.19
Ccdc88a-202ENSMUST00000109477 Gm26602M0QWA4 95 aa13.86□□□□□ -0.19
Ccdc88a-202ENSMUST00000109477 Defa1P11477 93 aa13.86□□□□□ -0.19
Ccdc88a-202ENSMUST00000109477 Defa3P28310 93 aa13.86□□□□□ -0.19
Ccdc88a-202ENSMUST00000109477 Defa10P50708 93 aa13.86□□□□□ -0.19
Ccdc88a-202ENSMUST00000109477 Spink13Q3UTS8 97 aa13.85□□□□□ -0.19
Ccdc88a-202ENSMUST00000109477 Eif4ebp3Q80VV3 101 aa13.85□□□□□ -0.19
Ccdc88a-202ENSMUST00000109477 A0A286YCN5 57 aa13.84□□□□□ -0.19
Ccdc88a-202ENSMUST00000109477 Mc5rP41149 325 aa13.84□□□□□ -0.19
Ccdc88a-202ENSMUST00000109477 SelenowP63300 88 aa13.84□□□□□ -0.19
Ccdc88a-202ENSMUST00000109477 Pglyrp4Q0VB07 374 aa13.84□□□□□ -0.19
Ccdc88a-202ENSMUST00000109477 Gm17577J3QNF7 156 aa13.83□□□□□ -0.2
Ccdc88a-202ENSMUST00000109477 Igkv8-18A0A0B4J1J3 123 aa13.82□□□□□ -0.2
Ccdc88a-202ENSMUST00000109477 Ube2d4D3YUH6 135 aa13.82□□□□□ -0.2
Ccdc88a-202ENSMUST00000109477 Gm10735Q3US96 136 aa13.82□□□□□ -0.2
Ccdc88a-202ENSMUST00000109477 4930519P11RikQ9CUJ8 166 aa13.82□□□□□ -0.2
Ccdc88a-202ENSMUST00000109477 Phpt1Q9DAK9 124 aa13.82□□□□□ -0.2
Ccdc88a-202ENSMUST00000109477 Nupr2Q497P3 102 aa13.81□□□□□ -0.2
Ccdc88a-202ENSMUST00000109477 Sprr1aQ62266 144 aa13.81□□□□□ -0.2
Ccdc88a-202ENSMUST00000109477 Igkv1-117A0A140T8M0 119 aa13.81□□□□□ -0.2
Ccdc88a-202ENSMUST00000109477 Cox7bP56393 80 aa13.81□□□□□ -0.2
Ccdc88a-202ENSMUST00000109477 Defb47Q30KN1 79 aa13.81□□□□□ -0.2
Ccdc88a-202ENSMUST00000109477 Defb40Q70KL2 73 aa13.81□□□□□ -0.2
Ccdc88a-202ENSMUST00000109477 Dnah9B1AR51 4484 aa13.8□□□□□ -0.2
Ccdc88a-202ENSMUST00000109477 Ighv1-62-2A0A0A6YXZ4 119 aa13.79□□□□□ -0.2
Ccdc88a-202ENSMUST00000109477 Csdc2Q91YQ3 154 aa13.79□□□□□ -0.2
Ccdc88a-202ENSMUST00000109477 NrepQ07475 68 aa13.78□□□□□ -0.2
Ccdc88a-202ENSMUST00000109477 Mtatp8P03930 67 aa13.78□□□□□ -0.2
Ccdc88a-202ENSMUST00000109477 Dnah11E9Q7N9 4488 aa13.77□□□□□ -0.2
Ccdc88a-202ENSMUST00000109477 Gm5153P01627 120 aa13.77□□□□□ -0.21
Ccdc88a-202ENSMUST00000109477 Gm10845Q3UNY9 185 aa13.76□□□□□ -0.21
Ccdc88a-202ENSMUST00000109477 Gm11627A6PWP4 55 aa13.76□□□□□ -0.21
Ccdc88a-202ENSMUST00000109477 Bud31Q6PGH1 103 aa13.76□□□□□ -0.21
Ccdc88a-202ENSMUST00000109477 BB014433Q8C5R5 389 aa13.76□□□□□ -0.21
Ccdc88a-202ENSMUST00000109477 Gm29423A0A087WRM1 55 aa13.75□□□□□ -0.21
Ccdc88a-202ENSMUST00000109477 Rpl28P41105 137 aaKnown RBP13.75□□□□□ -0.21
Ccdc88a-202ENSMUST00000109477 Ryr3A2AGL3 4863 aa13.73□□□□□ -0.21
Ccdc88a-202ENSMUST00000109477 CenpwQ3URR0 86 aa13.73□□□□□ -0.21
Ccdc88a-202ENSMUST00000109477 Igkv3-2A0A075B5P0 119 aa13.72□□□□□ -0.21
Ccdc88a-202ENSMUST00000109477 P01819 144 aa13.72□□□□□ -0.21
Ccdc88a-202ENSMUST00000109477 Defa20Q45VN2 95 aa13.72□□□□□ -0.21
Ccdc88a-202ENSMUST00000109477 Wfdc3Q14AE4 130 aa13.71□□□□□ -0.21
Ccdc88a-202ENSMUST00000109477 Dnal4Q9DCM4 105 aa13.71□□□□□ -0.21
Ccdc88a-202ENSMUST00000109477 Vps13dB1ART2 4390 aa13.7□□□□□ -0.22
Ccdc88a-202ENSMUST00000109477 Rpl18aP62717 176 aaKnown RBP13.7□□□□□ -0.22
Ccdc88a-202ENSMUST00000109477 Gm10837Q3UTT8 145 aa13.7□□□□□ -0.22
Ccdc88a-202ENSMUST00000109477 Ociad2Q9D8W7 154 aa13.7□□□□□ -0.22
Ccdc88a-202ENSMUST00000109477 Gm26920S4R2A5 56 aa13.7□□□□□ -0.22
Ccdc88a-202ENSMUST00000109477 Lgals4Q8K419 326 aa13.7□□□□□ -0.22
Ccdc88a-202ENSMUST00000109477 Smim26Q3V460 107 aa13.69□□□□□ -0.22
Ccdc88a-202ENSMUST00000109477 Cox6cQ9CPQ1 76 aa13.69□□□□□ -0.22
Ccdc88a-202ENSMUST00000109477 U90926O08546 118 aa13.68□□□□□ -0.22
Ccdc88a-202ENSMUST00000109477 Hint1P70349 126 aaKnown RBP13.68□□□□□ -0.22
Ccdc88a-202ENSMUST00000109477 Cdk2ap2Q9CPY4 127 aa13.68□□□□□ -0.22
Ccdc88a-202ENSMUST00000109477 Pou2af1Q64693 256 aa13.67□□□□□ -0.22
Ccdc88a-202ENSMUST00000109477 Ryr2E9Q401 4966 aaKnown RBP13.67□□□□□ -0.22
Ccdc88a-202ENSMUST00000109477 Defb29Q8BGW9 78 aa13.67□□□□□ -0.22
Ccdc88a-202ENSMUST00000109477 Gm10135F6TEE5 83 aa13.66□□□□□ -0.22
Ccdc88a-202ENSMUST00000109477 Igkv1-88A0A140T8N1 120 aa13.65□□□□□ -0.22
Ccdc88a-202ENSMUST00000109477 Gm5142Q8C5X9 133 aa13.64□□□□□ -0.23
Ccdc88a-202ENSMUST00000109477 Trav13n-2A0A0G2JF93 110 aa13.63□□□□□ -0.23
Ccdc88a-202ENSMUST00000109477 Gm16381A0A1Y7VKT9 73 aa13.63□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 94 ms