RNA–Protein interactions for RNA: ENSMUST00000106116.1

Ncdn-202, Transcript of Neurochondrin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncdn, Length 2,434 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncdn-202ENSMUST00000106116 Ndufa12Q7TMF3 145 aaKnown RBP9.55□□□□□ -0.88
Ncdn-202ENSMUST00000106116 Tmem86bQ497J1 226 aa9.55□□□□□ -0.88
Ncdn-202ENSMUST00000106116 Hivep1Q03172 2688 aa9.55□□□□□ -0.88
Ncdn-202ENSMUST00000106116 Xcl1P47993 114 aa9.54□□□□□ -0.88
Ncdn-202ENSMUST00000106116 Wfdc17Q5SSJ1 76 aa9.54□□□□□ -0.88
Ncdn-202ENSMUST00000106116 Gm36176A0A1W2P8D5 158 aa9.53□□□□□ -0.88
Ncdn-202ENSMUST00000106116 Igkv3-1A0A075B5P1 119 aa9.53□□□□□ -0.88
Ncdn-202ENSMUST00000106116 Igkv1-117A0A140T8M0 119 aa9.53□□□□□ -0.88
Ncdn-202ENSMUST00000106116 Igf1P05017 153 aa9.53□□□□□ -0.88
Ncdn-202ENSMUST00000106116 Rpl28P41105 137 aaKnown RBP9.53□□□□□ -0.88
Ncdn-202ENSMUST00000106116 Igkv8-34A0A0G2JDU0 121 aa9.52□□□□□ -0.89
Ncdn-202ENSMUST00000106116 Krtap11-1E9Q2E9 183 aa9.52□□□□□ -0.89
Ncdn-202ENSMUST00000106116 Trav13-1A0A075B644 110 aa9.51□□□□□ -0.89
Ncdn-202ENSMUST00000106116 Snhg11Q4G0K9 87 aa9.51□□□□□ -0.89
Ncdn-202ENSMUST00000106116 Hist1h4aP62806 103 aaKnown RBP9.51□□□□□ -0.89
Ncdn-202ENSMUST00000106116 EnhoQ8K1D8 76 aa9.51□□□□□ -0.89
Ncdn-202ENSMUST00000106116 C530025M09RikF6RGA8 229 aa9.5□□□□□ -0.89
Ncdn-202ENSMUST00000106116 4930524J08RikQ9CUJ5 163 aa9.5□□□□□ -0.89
Ncdn-202ENSMUST00000106116 Ighv1-56A0A0A6YXG2 117 aa9.49□□□□□ -0.89
Ncdn-202ENSMUST00000106116 Acyp1P56376 99 aa9.49□□□□□ -0.89
Ncdn-202ENSMUST00000106116 Kmt2aP55200 3966 aa9.49□□□□□ -0.89
Ncdn-202ENSMUST00000106116 Gm3618D3Z4P5 127 aa9.48□□□□□ -0.89
Ncdn-202ENSMUST00000106116 6430550D23RikE9Q1X6 194 aa9.48□□□□□ -0.89
Ncdn-202ENSMUST00000106116 4930519P11RikQ9CUJ8 166 aa9.48□□□□□ -0.89
Ncdn-202ENSMUST00000106116 Gm2916Q9D9B9 127 aa9.48□□□□□ -0.89
Ncdn-202ENSMUST00000106116 PtprqP0C5E4 2300 aa9.48□□□□□ -0.89
Ncdn-202ENSMUST00000106116 Srrm2Q8BTI8 2703 aaKnown RBP9.48□□□□□ -0.89
Ncdn-202ENSMUST00000106116 Tcl1b3P56842 122 aa9.48□□□□□ -0.89
Ncdn-202ENSMUST00000106116 Igkv8-24A0A140T8P5 121 aa9.47□□□□□ -0.89
Ncdn-202ENSMUST00000106116 D130052B06RikQ3UW13 202 aa9.47□□□□□ -0.89
Ncdn-202ENSMUST00000106116 2010109I03RikQ9CQ11 111 aa9.47□□□□□ -0.89
Ncdn-202ENSMUST00000106116 7530416G11RikJ3QJX6 159 aa9.47□□□□□ -0.89
Ncdn-202ENSMUST00000106116 E130208F15RikQ3UPV3 143 aa9.47□□□□□ -0.89
Ncdn-202ENSMUST00000106116 Defb29Q8BGW9 78 aa9.47□□□□□ -0.89
Ncdn-202ENSMUST00000106116 ApcQ61315 2845 aa9.47□□□□□ -0.89
Ncdn-202ENSMUST00000106116 Trav13-2A0A075B649 110 aa9.46□□□□□ -0.89
Ncdn-202ENSMUST00000106116 Gm11213A0A1B0GR83 88 aa9.46□□□□□ -0.9
Ncdn-202ENSMUST00000106116 Tcl1b5P56845 121 aa9.45□□□□□ -0.9
Ncdn-202ENSMUST00000106116 Defb10Q8R2I8 73 aa9.45□□□□□ -0.9
Ncdn-202ENSMUST00000106116 Reg3bP35230 175 aa9.45□□□□□ -0.9
Ncdn-202ENSMUST00000106116 Igkv1-35A0A0G2JDE5 120 aa9.44□□□□□ -0.9
Ncdn-202ENSMUST00000106116 Gm16381A0A1Y7VKT9 73 aa9.44□□□□□ -0.9
Ncdn-202ENSMUST00000106116 Gm20726G3UX18 150 aa9.44□□□□□ -0.9
Ncdn-202ENSMUST00000106116 Dnal4Q9DCM4 105 aa9.44□□□□□ -0.9
Ncdn-202ENSMUST00000106116 Igkv8-18A0A0B4J1J3 123 aa9.44□□□□□ -0.9
Ncdn-202ENSMUST00000106116 Gm16181B0V2H2 73 aa9.44□□□□□ -0.9
Ncdn-202ENSMUST00000106116 Gm7137J3QMW1 236 aa9.44□□□□□ -0.9
Ncdn-202ENSMUST00000106116 MifP34884 115 aaKnown RBP9.44□□□□□ -0.9
Ncdn-202ENSMUST00000106116 Ighv2-9A0A075B5Q5 116 aa9.43□□□□□ -0.9
Ncdn-202ENSMUST00000106116 Ighv13-2A0A0A6YWN3 119 aa9.43□□□□□ -0.9
Ncdn-202ENSMUST00000106116 Rpl18aP62717 176 aaKnown RBP9.43□□□□□ -0.9
Ncdn-202ENSMUST00000106116 Spata3Q9D9T6 193 aa9.43□□□□□ -0.9
Ncdn-202ENSMUST00000106116 AplnQ9R0R4 77 aa9.43□□□□□ -0.9
Ncdn-202ENSMUST00000106116 Smim26Q3V460 107 aa9.43□□□□□ -0.9
Ncdn-202ENSMUST00000106116 4930556J24RikQ9D4U7 146 aa9.43□□□□□ -0.9
Ncdn-202ENSMUST00000106116 Igkv8-16A0A0G2JDG9 121 aa9.42□□□□□ -0.9
Ncdn-202ENSMUST00000106116 Ntn5Q3UQ22 452 aa9.42□□□□□ -0.9
Ncdn-202ENSMUST00000106116 Gm10518F6UQQ9 182 aa9.42□□□□□ -0.9
Ncdn-202ENSMUST00000106116 Gm5153P01627 120 aa9.42□□□□□ -0.9
Ncdn-202ENSMUST00000106116 Gm9903Q8C9Y8 129 aa9.42□□□□□ -0.9
Ncdn-202ENSMUST00000106116 Notch1Q01705 2531 aa9.41□□□□□ -0.9
Ncdn-202ENSMUST00000106116 Trav13n-2A0A0G2JF93 110 aa9.41□□□□□ -0.9
Ncdn-202ENSMUST00000106116 4930518I15RikQ3V2W7 57 aa9.41□□□□□ -0.9
Ncdn-202ENSMUST00000106116 Gm5142Q8C5X9 133 aa9.41□□□□□ -0.9
Ncdn-202ENSMUST00000106116 Defa4P28311 92 aa9.41□□□□□ -0.9
Ncdn-202ENSMUST00000106116 Wfdc12Q9JHY3 85 aa9.41□□□□□ -0.9
Ncdn-202ENSMUST00000106116 Col6a5A6H584 2640 aa9.4□□□□□ -0.91
Ncdn-202ENSMUST00000106116 Hbb-b2P02089 147 aa9.4□□□□□ -0.91
Ncdn-202ENSMUST00000106116 Rps28P62858 69 aaKnown RBP9.4□□□□□ -0.91
Ncdn-202ENSMUST00000106116 Sslp1Q3UN54 99 aa9.39□□□□□ -0.91
Ncdn-202ENSMUST00000106116 Reg3dQ9QUS9 175 aa9.39□□□□□ -0.91
Ncdn-202ENSMUST00000106116 1810062G17RikG3X8Y2 129 aa9.38□□□□□ -0.91
Ncdn-202ENSMUST00000106116 Cox7bP56393 80 aa9.38□□□□□ -0.91
Ncdn-202ENSMUST00000106116 Cystm1Q8K353 104 aa9.38□□□□□ -0.91
Ncdn-202ENSMUST00000106116 P01819 144 aa9.37□□□□□ -0.91
Ncdn-202ENSMUST00000106116 Gm10845Q3UNY9 185 aa9.37□□□□□ -0.91
Ncdn-202ENSMUST00000106116 Serp2Q6TAW2 65 aa9.37□□□□□ -0.91
Ncdn-202ENSMUST00000106116 Gm17509Q9CZ61 145 aa9.37□□□□□ -0.91
Ncdn-202ENSMUST00000106116 Dnah3Q8BW94 4083 aa9.37□□□□□ -0.91
Ncdn-202ENSMUST00000106116 Cox7b2Q9D2H1 82 aa9.36□□□□□ -0.91
Ncdn-202ENSMUST00000106116 Ifitm6A0A1B0GS75 124 aa9.36□□□□□ -0.91
Ncdn-202ENSMUST00000106116 9430015G10RikA2ASP7 199 aa9.35□□□□□ -0.91
Ncdn-202ENSMUST00000106116 Ube2d4D3YUH6 135 aa9.35□□□□□ -0.91
Ncdn-202ENSMUST00000106116 Defa7P50705 93 aa9.35□□□□□ -0.91
Ncdn-202ENSMUST00000106116 Tmem258P61166 79 aa9.35□□□□□ -0.91
Ncdn-202ENSMUST00000106116 CnbpP53996 178 aaKnown RBP9.34□□□□□ -0.91
Ncdn-202ENSMUST00000106116 Igkv4-92A0A0B4J1I2 117 aa9.34□□□□□ -0.91
Ncdn-202ENSMUST00000106116 Rpl39lQ9CQD0 51 aa9.33□□□□□ -0.92
Ncdn-202ENSMUST00000106116 A730009L09RikA0A1B0GS82 72 aa9.33□□□□□ -0.92
Ncdn-202ENSMUST00000106116 Tmem254aP0DN89 123 aa9.33□□□□□ -0.92
Ncdn-202ENSMUST00000106116 Tmem254bP0DN90 123 aa9.33□□□□□ -0.92
Ncdn-202ENSMUST00000106116 Tmem254cP0DN91 123 aa9.33□□□□□ -0.92
Ncdn-202ENSMUST00000106116 Defa21Q8C1P2 93 aa9.32□□□□□ -0.92
Ncdn-202ENSMUST00000106116 Gm5617Q91VN2 117 aa9.32□□□□□ -0.92
Ncdn-202ENSMUST00000106116 Gm19935A0A1B0GSF9 52 aa9.32□□□□□ -0.92
Ncdn-202ENSMUST00000106116 Gm7102J3QQ10 178 aa9.32□□□□□ -0.92
Ncdn-202ENSMUST00000106116 Ufsp1Q9CZP0 217 aa9.32□□□□□ -0.92
Ncdn-202ENSMUST00000106116 Tmem243B2RVB9 118 aa9.31□□□□□ -0.92
Ncdn-202ENSMUST00000106116 Dnah14A0A140LIJ4 4489 aa9.3□□□□□ -0.92
Ncdn-202ENSMUST00000106116 A0A286YCN5 57 aa9.3□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 52.8 ms