RNA–Protein interactions for RNA: ENSMUST00000093061.6

Trim11-201, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim11, Length 2,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-201ENSMUST00000093061 4930519P11RikQ9CUJ8 166 aa10.68□□□□□ -0.7
Trim11-201ENSMUST00000093061 Igkv6-13A0A0G2JGY3 119 aa10.68□□□□□ -0.7
Trim11-201ENSMUST00000093061 Igkv3-9A0A140T8P4 119 aa10.68□□□□□ -0.7
Trim11-201ENSMUST00000093061 Ighv1-56A0A0A6YXG2 117 aa10.67□□□□□ -0.7
Trim11-201ENSMUST00000093061 Fn1P11276 2477 aaKnown RBP10.67□□□□□ -0.7
Trim11-201ENSMUST00000093061 E130114P18RikF6S0S7 154 aa10.67□□□□□ -0.7
Trim11-201ENSMUST00000093061 B230359F08RikA0A0B4J1K3 109 aa10.65□□□□□ -0.7
Trim11-201ENSMUST00000093061 Hbb-b2P02089 147 aa10.65□□□□□ -0.7
Trim11-201ENSMUST00000093061 Nsd1O88491 2588 aaKnown RBP10.64□□□□□ -0.71
Trim11-201ENSMUST00000093061 Ntn5Q3UQ22 452 aa10.64□□□□□ -0.71
Trim11-201ENSMUST00000093061 Csdc2Q91YQ3 154 aa10.64□□□□□ -0.71
Trim11-201ENSMUST00000093061 Kmt2aP55200 3966 aa10.63□□□□□ -0.71
Trim11-201ENSMUST00000093061 Ighv8-13A0A075B5Y0 101 aa10.63□□□□□ -0.71
Trim11-201ENSMUST00000093061 D130052B06RikQ3UW13 202 aa10.63□□□□□ -0.71
Trim11-201ENSMUST00000093061 7530416G11RikJ3QJX6 159 aa10.63□□□□□ -0.71
Trim11-201ENSMUST00000093061 Trav9n-4A0A075B631 113 aa10.62□□□□□ -0.71
Trim11-201ENSMUST00000093061 Gm7138L7N2C3 230 aa10.62□□□□□ -0.71
Trim11-201ENSMUST00000093061 Smim26Q3V460 107 aa10.62□□□□□ -0.71
Trim11-201ENSMUST00000093061 Gm3238W4VSP7 230 aa10.62□□□□□ -0.71
Trim11-201ENSMUST00000093061 Srrm2Q8BTI8 2703 aaKnown RBP10.62□□□□□ -0.71
Trim11-201ENSMUST00000093061 1810062G17RikG3X8Y2 129 aa10.61□□□□□ -0.71
Trim11-201ENSMUST00000093061 Rpl18aP62717 176 aaKnown RBP10.61□□□□□ -0.71
Trim11-201ENSMUST00000093061 Tcl1b3P56842 122 aa10.6□□□□□ -0.71
Trim11-201ENSMUST00000093061 Gm3618D3Z4P5 127 aa10.6□□□□□ -0.71
Trim11-201ENSMUST00000093061 Tmem86bQ497J1 226 aa10.6□□□□□ -0.71
Trim11-201ENSMUST00000093061 Gm2916Q9D9B9 127 aa10.6□□□□□ -0.71
Trim11-201ENSMUST00000093061 Ighv8-11A0A075B5X4 119 aa10.59□□□□□ -0.71
Trim11-201ENSMUST00000093061 Ifitm6A0A1B0GS75 124 aa10.59□□□□□ -0.71
Trim11-201ENSMUST00000093061 Phxr5P08399 672 aa10.59□□□□□ -0.71
Trim11-201ENSMUST00000093061 ApcQ61315 2845 aa10.57□□□□□ -0.72
Trim11-201ENSMUST00000093061 Gm5142Q8C5X9 133 aa10.57□□□□□ -0.72
Trim11-201ENSMUST00000093061 Gm20726G3UX18 150 aa10.56□□□□□ -0.72
Trim11-201ENSMUST00000093061 Tcl1b5P56845 121 aa10.56□□□□□ -0.72
Trim11-201ENSMUST00000093061 Trav13n-2A0A0G2JF93 110 aa10.56□□□□□ -0.72
Trim11-201ENSMUST00000093061 Gm7102J3QQ10 178 aa10.56□□□□□ -0.72
Trim11-201ENSMUST00000093061 Igkv3-1A0A075B5P1 119 aa10.55□□□□□ -0.72
Trim11-201ENSMUST00000093061 Tmem254aP0DN89 123 aa10.55□□□□□ -0.72
Trim11-201ENSMUST00000093061 Tmem254bP0DN90 123 aa10.55□□□□□ -0.72
Trim11-201ENSMUST00000093061 Tmem254cP0DN91 123 aa10.55□□□□□ -0.72
Trim11-201ENSMUST00000093061 Serp2Q6TAW2 65 aa10.55□□□□□ -0.72
Trim11-201ENSMUST00000093061 Trav13-1A0A075B644 110 aa10.54□□□□□ -0.72
Trim11-201ENSMUST00000093061 Gm10845Q3UNY9 185 aa10.54□□□□□ -0.72
Trim11-201ENSMUST00000093061 PtprqP0C5E4 2300 aa10.54□□□□□ -0.72
Trim11-201ENSMUST00000093061 Col6a5A6H584 2640 aa10.54□□□□□ -0.72
Trim11-201ENSMUST00000093061 Gm36176A0A1W2P8D5 158 aa10.54□□□□□ -0.72
Trim11-201ENSMUST00000093061 Krtap11-1E9Q2E9 183 aa10.54□□□□□ -0.72
Trim11-201ENSMUST00000093061 Igkv8-34A0A0G2JDU0 121 aa10.53□□□□□ -0.72
Trim11-201ENSMUST00000093061 4930518I15RikQ3V2W7 57 aa10.53□□□□□ -0.72
Trim11-201ENSMUST00000093061 Notch1Q01705 2531 aa10.53□□□□□ -0.72
Trim11-201ENSMUST00000093061 Dnah3Q8BW94 4083 aa10.53□□□□□ -0.72
Trim11-201ENSMUST00000093061 Cystm1Q8K353 104 aa10.53□□□□□ -0.72
Trim11-201ENSMUST00000093061 Rpl39lQ9CQD0 51 aa10.53□□□□□ -0.72
Trim11-201ENSMUST00000093061 Ighv2-9A0A075B5Q5 116 aa10.51□□□□□ -0.73
Trim11-201ENSMUST00000093061 C530025M09RikF6RGA8 229 aa10.51□□□□□ -0.73
Trim11-201ENSMUST00000093061 Rps28P62858 69 aaKnown RBP10.51□□□□□ -0.73
Trim11-201ENSMUST00000093061 Wfdc17Q5SSJ1 76 aa10.51□□□□□ -0.73
Trim11-201ENSMUST00000093061 Gm9903Q8C9Y8 129 aa10.51□□□□□ -0.73
Trim11-201ENSMUST00000093061 Igkv8-18A0A0B4J1J3 123 aa10.5□□□□□ -0.73
Trim11-201ENSMUST00000093061 Defa7P50705 93 aa10.5□□□□□ -0.73
Trim11-201ENSMUST00000093061 2010109I03RikQ9CQ11 111 aa10.5□□□□□ -0.73
Trim11-201ENSMUST00000093061 Igkv8-24A0A140T8P5 121 aa10.5□□□□□ -0.73
Trim11-201ENSMUST00000093061 Snhg11Q4G0K9 87 aa10.5□□□□□ -0.73
Trim11-201ENSMUST00000093061 EnhoQ8K1D8 76 aa10.5□□□□□ -0.73
Trim11-201ENSMUST00000093061 Q9DAA7 145 aa10.5□□□□□ -0.73
Trim11-201ENSMUST00000093061 Gm11213A0A1B0GR83 88 aa10.49□□□□□ -0.73
Trim11-201ENSMUST00000093061 Gm5153P01627 120 aa10.49□□□□□ -0.73
Trim11-201ENSMUST00000093061 4930556J24RikQ9D4U7 146 aa10.49□□□□□ -0.73
Trim11-201ENSMUST00000093061 Trav13-2A0A075B649 110 aa10.49□□□□□ -0.73
Trim11-201ENSMUST00000093061 Defa4P28311 92 aa10.49□□□□□ -0.73
Trim11-201ENSMUST00000093061 Tmem258P61166 79 aa10.49□□□□□ -0.73
Trim11-201ENSMUST00000093061 P01819 144 aa10.48□□□□□ -0.73
Trim11-201ENSMUST00000093061 Ighv10-3A0A075B5T6 119 aa10.47□□□□□ -0.73
Trim11-201ENSMUST00000093061 MifP34884 115 aaKnown RBP10.47□□□□□ -0.73
Trim11-201ENSMUST00000093061 Defa21Q8C1P2 93 aa10.47□□□□□ -0.73
Trim11-201ENSMUST00000093061 Gm10308Q9CVR5 141 aa10.47□□□□□ -0.73
Trim11-201ENSMUST00000093061 Tmem243B2RVB9 118 aa10.46□□□□□ -0.73
Trim11-201ENSMUST00000093061 E130208F15RikQ3UPV3 143 aa10.46□□□□□ -0.74
Trim11-201ENSMUST00000093061 Gm19935A0A1B0GSF9 52 aa10.45□□□□□ -0.74
Trim11-201ENSMUST00000093061 Ube2d4D3YUH6 135 aa10.45□□□□□ -0.74
Trim11-201ENSMUST00000093061 Reg3bP35230 175 aa10.45□□□□□ -0.74
Trim11-201ENSMUST00000093061 Cox7bP56393 80 aa10.45□□□□□ -0.74
Trim11-201ENSMUST00000093061 Dnah6E9Q0B6 4144 aa10.45□□□□□ -0.74
Trim11-201ENSMUST00000093061 Ighv13-2A0A0A6YWN3 119 aa10.45□□□□□ -0.74
Trim11-201ENSMUST00000093061 Igkv8-16A0A0G2JDG9 121 aa10.45□□□□□ -0.74
Trim11-201ENSMUST00000093061 Ormdl1Q921I0 153 aa10.45□□□□□ -0.74
Trim11-201ENSMUST00000093061 Gm7137J3QMW1 236 aa10.44□□□□□ -0.74
Trim11-201ENSMUST00000093061 Naa38Q9D2U5 125 aa10.44□□□□□ -0.74
Trim11-201ENSMUST00000093061 Igkv2-109A0A075B5K6 120 aa10.44□□□□□ -0.74
Trim11-201ENSMUST00000093061 6430550D23RikE9Q1X6 194 aa10.44□□□□□ -0.74
Trim11-201ENSMUST00000093061 Gm10518F6UQQ9 182 aa10.44□□□□□ -0.74
Trim11-201ENSMUST00000093061 Igkv8-21A0A140T8P7 120 aa10.43□□□□□ -0.74
Trim11-201ENSMUST00000093061 Inafm2A0A1L1STD6 152 aa10.43□□□□□ -0.74
Trim11-201ENSMUST00000093061 CnbpP53996 178 aaKnown RBP10.43□□□□□ -0.74
Trim11-201ENSMUST00000093061 Wfdc12Q9JHY3 85 aa10.42□□□□□ -0.74
Trim11-201ENSMUST00000093061 Gm16181B0V2H2 73 aa10.42□□□□□ -0.74
Trim11-201ENSMUST00000093061 Dnah10D3YYQ8 4591 aa10.41□□□□□ -0.74
Trim11-201ENSMUST00000093061 Klk12B2RVZ0 247 aa10.41□□□□□ -0.74
Trim11-201ENSMUST00000093061 GhrhP16043 103 aa10.41□□□□□ -0.74
Trim11-201ENSMUST00000093061 Defb10Q8R2I8 73 aa10.41□□□□□ -0.74
Trim11-201ENSMUST00000093061 Ubl5Q9EPV8 73 aa10.41□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 60.8 ms