RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Cd99Q8VCN6 175 aa6.82□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Hivep1Q03172 2688 aa6.82□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Igkv8-34A0A0G2JDU0 121 aa6.82□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Tmem223Q9CQE2 199 aaKnown RBP6.82□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Esm1Q9QYY7 184 aa6.82□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Igsf10Q3V1M1 2594 aa6.81□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Zfand2aQ9JII7 171 aa6.81□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Lypd5Q9D7Z7 256 aa6.81□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Pdzd2E9Q1M1 2796 aa6.8□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Sslp1Q3UN54 99 aa6.8□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Gm10549Q3URY4 149 aa6.8□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 ScxQ64124 207 aa6.8□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 EnhoQ8K1D8 76 aa6.8□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Tenm4Q3UHK6 2771 aa6.8□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Trbv13-2A0A140T8N6 113 aa6.8□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Gm11565A2A4M7 156 aa6.8□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Tmem254aP0DN89 123 aa6.8□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Tmem254bP0DN90 123 aa6.8□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Tmem254cP0DN91 123 aa6.8□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Cmc4Q61908 68 aa6.8□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Col6a5A6H584 2640 aa6.8□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Defa27F2Z403 93 aa6.8□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Apoc4Q61268 124 aa6.79□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Ighv1-59A0A0A6YXE0 117 aa6.79□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Ufsp1Q9CZP0 217 aa6.79□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Ormdl1Q921I0 153 aa6.79□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Rnf152Q8BG47 203 aa6.78□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Gpha2Q925Q5 128 aa6.78□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 MobpQ9D2P8 170 aa6.78□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 Gm10772F7AIG4 85 aa6.78□□□□□ -1.32
Pcdh1-201ENSMUST00000057185 A0A286YE02 88 aa6.77□□□□□ -1.33
Pcdh1-201ENSMUST00000057185 CrygdP04342 174 aa6.77□□□□□ -1.33
Pcdh1-201ENSMUST00000057185 Reg3bP35230 175 aa6.77□□□□□ -1.33
Pcdh1-201ENSMUST00000057185 Gm9805F6YK59 57 aa6.77□□□□□ -1.33
Pcdh1-201ENSMUST00000057185 Defa28D3Z1V9 94 aa6.77□□□□□ -1.33
Pcdh1-201ENSMUST00000057185 BikO70337 150 aa6.77□□□□□ -1.33
Pcdh1-201ENSMUST00000057185 D730001G18RikA0A087WQU7 115 aa6.76□□□□□ -1.33
Pcdh1-201ENSMUST00000057185 Gm10845Q3UNY9 185 aa6.76□□□□□ -1.33
Pcdh1-201ENSMUST00000057185 Inafm2A0A1L1STD6 152 aa6.76□□□□□ -1.33
Pcdh1-201ENSMUST00000057185 Spink4O35679 86 aa6.76□□□□□ -1.33
Pcdh1-201ENSMUST00000057185 Tex15F8VPN2 2785 aa6.76□□□□□ -1.33
Pcdh1-201ENSMUST00000057185 Gm17577J3QNF7 156 aa6.75□□□□□ -1.33
Pcdh1-201ENSMUST00000057185 Brk1Q91VR8 75 aa6.75□□□□□ -1.33
Pcdh1-201ENSMUST00000057185 CrygfQ9CXV3 174 aa6.75□□□□□ -1.33
Pcdh1-201ENSMUST00000057185 Odf3l2Q3TZ65 277 aa6.75□□□□□ -1.33
Pcdh1-201ENSMUST00000057185 Camk2n2Q78WH7 79 aa6.75□□□□□ -1.33
Pcdh1-201ENSMUST00000057185 Igkv3-2A0A075B5P0 119 aa6.74□□□□□ -1.33
Pcdh1-201ENSMUST00000057185 Krtap24-1G3X9A2 248 aa6.74□□□□□ -1.33
Pcdh1-201ENSMUST00000057185 Fam19a1Q7TPG8 133 aa6.74□□□□□ -1.33
Pcdh1-201ENSMUST00000057185 Ube2d4D3YUH6 135 aa6.74□□□□□ -1.33
Pcdh1-201ENSMUST00000057185 Sfta2E9PXB6 77 aa6.73□□□□□ -1.33
Pcdh1-201ENSMUST00000057185 Gm26661M0QWV4 156 aa6.73□□□□□ -1.33
Pcdh1-201ENSMUST00000057185 GhrhP16043 103 aa6.73□□□□□ -1.33
Pcdh1-201ENSMUST00000057185 Igkv8-26A0A075B5N5 123 aa6.73□□□□□ -1.33
Pcdh1-201ENSMUST00000057185 BC048502Q80Y74 154 aa6.73□□□□□ -1.33
Pcdh1-201ENSMUST00000057185 Gm10735Q3US96 136 aa6.72□□□□□ -1.33
Pcdh1-201ENSMUST00000057185 Cox7b2Q9D2H1 82 aa6.72□□□□□ -1.33
Pcdh1-201ENSMUST00000057185 Gm5153P01627 120 aa6.72□□□□□ -1.33
Pcdh1-201ENSMUST00000057185 Defb50Q6TU36 73 aa6.71□□□□□ -1.33
Pcdh1-201ENSMUST00000057185 Klk11Q9QYN3 276 aa6.71□□□□□ -1.33
Pcdh1-201ENSMUST00000057185 Rbm3O89086 153 aaKnown RBP6.71□□□□□ -1.34
Pcdh1-201ENSMUST00000057185 Serp2Q6TAW2 65 aa6.7□□□□□ -1.34
Pcdh1-201ENSMUST00000057185 Col7a1Q63870 2944 aa6.7□□□□□ -1.34
Pcdh1-201ENSMUST00000057185 Defb37Q7TMD2 62 aa6.7□□□□□ -1.34
Pcdh1-201ENSMUST00000057185 Nbeal2Q6ZQA0 2742 aa6.7□□□□□ -1.34
Pcdh1-201ENSMUST00000057185 Samd13D3YUG0 102 aa6.69□□□□□ -1.34
Pcdh1-201ENSMUST00000057185 CrygeQ03740 174 aa6.69□□□□□ -1.34
Pcdh1-201ENSMUST00000057185 4930518I15RikQ3V2W7 57 aa6.69□□□□□ -1.34
Pcdh1-201ENSMUST00000057185 Defb12Q8K4N3 78 aa6.69□□□□□ -1.34
Pcdh1-201ENSMUST00000057185 Ighv1-56A0A0A6YXG2 117 aa6.69□□□□□ -1.34
Pcdh1-201ENSMUST00000057185 HrnrQ8VHD8 2496 aa6.69□□□□□ -1.34
Pcdh1-201ENSMUST00000057185 Fn1P11276 2477 aaKnown RBP6.68□□□□□ -1.34
Pcdh1-201ENSMUST00000057185 9530003J23RikQ8BM26 151 aa6.68□□□□□ -1.34
Pcdh1-201ENSMUST00000057185 Ighv10-1A0A0B4J1J6 119 aa6.68□□□□□ -1.34
Pcdh1-201ENSMUST00000057185 Ifitm6A0A1B0GS75 124 aa6.68□□□□□ -1.34
Pcdh1-201ENSMUST00000057185 Csmd2V9GX34 3611 aa6.67□□□□□ -1.34
Pcdh1-201ENSMUST00000057185 Ighv2-9-1A0A075B697 116 aa6.67□□□□□ -1.34
Pcdh1-201ENSMUST00000057185 Itpr2Q9Z329 2701 aa6.66□□□□□ -1.34
Pcdh1-201ENSMUST00000057185 Tcl1b3P56842 122 aa6.66□□□□□ -1.34
Pcdh1-201ENSMUST00000057185 7530416G11RikJ3QJX6 159 aa6.66□□□□□ -1.34
Pcdh1-201ENSMUST00000057185 Pet100P0DJE0 76 aa6.66□□□□□ -1.34
Pcdh1-201ENSMUST00000057185 Cox7bP56393 80 aa6.66□□□□□ -1.34
Pcdh1-201ENSMUST00000057185 A830031A19RikQ8BNT5 113 aa6.66□□□□□ -1.34
Pcdh1-201ENSMUST00000057185 4930556J24RikQ9D4U7 146 aa6.66□□□□□ -1.34
Pcdh1-201ENSMUST00000057185 Klk9Q32M27 251 aa6.65□□□□□ -1.34
Pcdh1-201ENSMUST00000057185 Q9DAA7 145 aa6.65□□□□□ -1.34
Pcdh1-201ENSMUST00000057185 Defb10Q8R2I8 73 aa6.65□□□□□ -1.34
Pcdh1-201ENSMUST00000057185 Prr15lQ8JZM2 100 aa6.65□□□□□ -1.35
Pcdh1-201ENSMUST00000057185 9430015G10RikA2ASP7 199 aa6.64□□□□□ -1.35
Pcdh1-201ENSMUST00000057185 1810062G17RikG3X8Y2 129 aa6.64□□□□□ -1.35
Pcdh1-201ENSMUST00000057185 Gm43218A0A0G2JGT0 114 aa6.64□□□□□ -1.35
Pcdh1-201ENSMUST00000057185 FasnP19096 2504 aaKnown RBP6.64□□□□□ -1.35
Pcdh1-201ENSMUST00000057185 Igkv8-27A0A0G2JF28 120 aa6.63□□□□□ -1.35
Pcdh1-201ENSMUST00000057185 Igkv8-30A0A140T8M3 121 aa6.63□□□□□ -1.35
Pcdh1-201ENSMUST00000057185 Ube2bP63147 152 aa6.63□□□□□ -1.35
Pcdh1-201ENSMUST00000057185 Defb40Q70KL2 73 aa6.63□□□□□ -1.35
Pcdh1-201ENSMUST00000057185 Ighv10-3A0A075B5T6 119 aa6.63□□□□□ -1.35
Pcdh1-201ENSMUST00000057185 Krtap11-1E9Q2E9 183 aa6.62□□□□□ -1.35
Pcdh1-201ENSMUST00000057185 C530025M09RikF6RGA8 229 aa6.62□□□□□ -1.35
Pcdh1-201ENSMUST00000057185 Msrb1Q9JLC3 116 aa6.62□□□□□ -1.35
Retrieved 100 of 22,080 RNA–protein pairs in 72.6 ms