RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 7530416G11RikJ3QJX6 159 aa6.73□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Tmem86bQ497J1 226 aa6.73□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 C530025M09RikF6RGA8 229 aa6.73□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Mzt1Q8BUR9 78 aa6.73□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Igkv8-16A0A0G2JDG9 121 aa6.73□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Trbv13-2A0A140T8N6 113 aa6.73□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Gm10518F6UQQ9 182 aa6.73□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Defa4P28311 92 aa6.73□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Tmem223Q9CQE2 199 aaKnown RBP6.73□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Igkv4-61A0A0G2JH00 117 aa6.72□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Gm5153P01627 120 aa6.72□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Gm10845Q3UNY9 185 aa6.72□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Krtap24-1G3X9A2 248 aa6.72□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 FlnbQ80X90 2602 aaKnown RBP6.72□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Ighv1-59A0A0A6YXE0 117 aa6.71□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Igkv4-58A0A0G2JGI6 119 aa6.71□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Igkv8-24A0A140T8P5 121 aa6.71□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Defa21Q8C1P2 93 aa6.71□□□□□ -1.33
Ccdc40-202ENSMUST00000053440 Q8R092 253 aa6.71□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 MplkipQ9D011 178 aa6.71□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 Igkv3-9A0A140T8P4 119 aa6.71□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 Gm10320E9PW43 113 aa6.71□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 Reg3dQ9QUS9 175 aa6.7□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 Rpl18aP62717 176 aaKnown RBP6.7□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 Q9DAA7 145 aa6.7□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 E130218I03RikA0A0U1RNU5 63 aa6.7□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 Sprr1bQ62267 153 aa6.7□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 D730001G18RikA0A087WQU7 115 aa6.69□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 Higd2aQ9CQJ1 106 aa6.69□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 ApcQ61315 2845 aa6.69□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 4930518I15RikQ3V2W7 57 aa6.69□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 Dad1P61804 113 aa6.68□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 Scgb1b2O35176 93 aa6.68□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 Klk11Q9QYN3 276 aa6.68□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 AtrQ9JKK8 2635 aa6.68□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 CicQ924A2 2510 aa6.67□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 Krtap11-1E9Q2E9 183 aa6.67□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 Tmem254aP0DN89 123 aa6.67□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 Tmem254bP0DN90 123 aa6.67□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 Tmem254cP0DN91 123 aa6.67□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 Fam19a1Q7TPG8 133 aa6.67□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 Tenm4Q3UHK6 2771 aa6.67□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 Tenm1Q9WTS4 2731 aa6.67□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 A0A286YCN5 57 aa6.67□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 Tmem243B2RVB9 118 aa6.67□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 EnhoQ8K1D8 76 aa6.67□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 PtprqP0C5E4 2300 aa6.66□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 E130208F15RikQ3UPV3 143 aa6.66□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 Gm9903Q8C9Y8 129 aa6.66□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 Notch1Q01705 2531 aa6.66□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 Gm9805F6YK59 57 aa6.66□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 Igkv8-27A0A0G2JF28 120 aa6.66□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 Igkv8-30A0A140T8M3 121 aa6.66□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 CrygfQ9CXV3 174 aa6.66□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 Ntn5Q3UQ22 452 aa6.65□□□□□ -1.34
Ccdc40-202ENSMUST00000053440 Igkv8-21A0A140T8P7 120 aa6.65□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 Defa23Q5G866 93 aa6.65□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 Fbn1Q61554 2873 aaKnown RBP6.65□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 Lamtor3O88653 124 aa6.64□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 Ormdl1Q921I0 153 aa6.64□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 Serp2Q6TAW2 65 aa6.64□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 Ighv10-3A0A075B5T6 119 aa6.64□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 Ighv13-2A0A0A6YWN3 119 aa6.64□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 Tcl1b3P56842 122 aa6.64□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 Igkv8-26A0A075B5N5 123 aa6.63□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 Igkv3-1A0A075B5P1 119 aa6.63□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 CrygdP04342 174 aa6.63□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 CrygeQ03740 174 aa6.63□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 P01819 144 aa6.63□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 Fam229bQ8CF36 80 aa6.63□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 Ighv2-9A0A075B5Q5 116 aa6.63□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 Cox7bP56393 80 aa6.63□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 Csdc2Q91YQ3 154 aa6.63□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 4930556J24RikQ9D4U7 146 aa6.62□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 Ubl5Q9EPV8 73 aa6.62□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 Ube2d4D3YUH6 135 aa6.62□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 Igkv1-88A0A140T8N1 120 aa6.62□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 Erdr1J3QMM0 206 aa6.62□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 A830031A19RikQ8BNT5 113 aa6.62□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 CnbpP53996 178 aaKnown RBP6.61□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 B230307C23RikQ8BLB2 64 aa6.6□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 Msrb1Q9JLC3 116 aa6.6□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 Gm10308Q9CVR5 141 aa6.6□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 Defb37Q7TMD2 62 aa6.59□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 Ighv10-1A0A0B4J1J6 119 aa6.59□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 Psors1c2Q80ZC9 134 aa6.59□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 Ufsp1Q9CZP0 217 aa6.59□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 Stab1Q8R4Y4 2571 aa6.59□□□□□ -1.35
Ccdc40-202ENSMUST00000053440 Gm17689B3GLJ4 109 aa6.58□□□□□ -1.36
Ccdc40-202ENSMUST00000053440 9530003J23RikQ8BM26 151 aa6.58□□□□□ -1.36
Ccdc40-202ENSMUST00000053440 Mrpl52Q9D0Y8 121 aa6.58□□□□□ -1.36
Ccdc40-202ENSMUST00000053440 AY074887Q8R5F9 132 aa6.58□□□□□ -1.36
Ccdc40-202ENSMUST00000053440 Itpr2Q9Z329 2701 aa6.57□□□□□ -1.36
Ccdc40-202ENSMUST00000053440 Hivep1Q03172 2688 aa6.57□□□□□ -1.36
Ccdc40-202ENSMUST00000053440 Inafm2A0A1L1STD6 152 aa6.57□□□□□ -1.36
Ccdc40-202ENSMUST00000053440 A730009L09RikA0A1B0GS82 72 aa6.56□□□□□ -1.36
Ccdc40-202ENSMUST00000053440 Fam19a3Q7TPG6 132 aa6.56□□□□□ -1.36
Ccdc40-202ENSMUST00000053440 Gm17577J3QNF7 156 aa6.56□□□□□ -1.36
Ccdc40-202ENSMUST00000053440 2310034G01RikA0A286YDL3 209 aa6.55□□□□□ -1.36
Ccdc40-202ENSMUST00000053440 GhrhP16043 103 aa6.55□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 49.9 ms