RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Cdip1Q9DB75 208 aa4.94□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Snai3Q9QY31 287 aa4.94□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Timm17aQ9Z0V8 171 aa4.94□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Ighv1-63A0A075B5X2 117 aa4.94□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Trav13-2A0A075B649 110 aa4.94□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Crip3Q6Q6R3 243 aa4.94□□□□□ -1.62
Bdnf-201ENSMUST00000053317 P06328 117 aa4.94□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Sec61gP60060 68 aa4.94□□□□□ -1.62
Bdnf-201ENSMUST00000053317 PrcdQ00LT2 53 aa4.94□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Gm17472A0A075B683 117 aa4.93□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Gm20499D3Z4G5 72 aa4.93□□□□□ -1.62
Bdnf-201ENSMUST00000053317 U90926O08546 118 aa4.93□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Gm9747Q810H1 104 aa4.93□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Gm10542F6XDR3 90 aa4.93□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Acyp1P56376 99 aa4.93□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Q99M08 65 aa4.93□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Lypd5Q9D7Z7 256 aa4.93□□□□□ -1.62
Bdnf-201ENSMUST00000053317 B230359F08RikA0A0B4J1K3 109 aa4.93□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Gm10322F7D7I4 111 aa4.92□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Cfap126Q6P8X9 189 aa4.92□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Ifitm1Q9D103 106 aa4.92□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Hspg2Q05793 3707 aaKnown RBP4.92□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Ly6hQ9WUC3 139 aa4.92□□□□□ -1.62
Bdnf-201ENSMUST00000053317 SnurfQ9WU12 71 aa4.92□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Gm19935A0A1B0GSF9 52 aa4.91□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Smim1P0C8K7 78 aa4.91□□□□□ -1.62
Bdnf-201ENSMUST00000053317 4930564D02RikQ9D4S4 103 aa4.91□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Igkv3-2A0A075B5P0 119 aa4.91□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Gm9507D3Z5T3 223 aa4.91□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Klk11Q9QYN3 276 aa4.91□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Gm10490F6VBM2 120 aa4.9□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Apoc4Q61268 124 aa4.9□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Ndufa4l2Q4FZG9 87 aa4.9□□□□□ -1.62
Bdnf-201ENSMUST00000053317 5730596B20RikQ8BQ08 205 aa4.9□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Prr15lQ8JZM2 100 aa4.9□□□□□ -1.62
Bdnf-201ENSMUST00000053317 Igkv3-1A0A075B5P1 119 aa4.9□□□□□ -1.63
Bdnf-201ENSMUST00000053317 BC048502Q80Y74 154 aa4.9□□□□□ -1.63
Bdnf-201ENSMUST00000053317 1700010B08RikQ9DAI7 102 aa4.9□□□□□ -1.63
Bdnf-201ENSMUST00000053317 Reg3bP35230 175 aa4.89□□□□□ -1.63
Bdnf-201ENSMUST00000053317 BaalcQ8VHV1 145 aa4.89□□□□□ -1.63
Bdnf-201ENSMUST00000053317 Prr13Q9CQJ5 137 aa4.89□□□□□ -1.63
Bdnf-201ENSMUST00000053317 Trav13-4-dv7A0A075B6C2 110 aa4.89□□□□□ -1.63
Bdnf-201ENSMUST00000053317 Ighv13-2A0A0A6YWN3 119 aa4.89□□□□□ -1.63
Bdnf-201ENSMUST00000053317 1500011B03RikQ3TTH7 73 aa4.89□□□□□ -1.63
Bdnf-201ENSMUST00000053317 Trav13d-4A0A0G2JFX3 110 aa4.89□□□□□ -1.63
Bdnf-201ENSMUST00000053317 Gm10518F6UQQ9 182 aa4.89□□□□□ -1.63
Bdnf-201ENSMUST00000053317 PscaP57096 123 aa4.89□□□□□ -1.63
Bdnf-201ENSMUST00000053317 Rpl39lQ9CQD0 51 aa4.89□□□□□ -1.63
Bdnf-201ENSMUST00000053317 Phxr5P08399 672 aa4.89□□□□□ -1.63
Bdnf-201ENSMUST00000053317 SrarpQ3ULG3 163 aa4.89□□□□□ -1.63
Bdnf-201ENSMUST00000053317 H2al1aQ5M8Q2 105 aa4.89□□□□□ -1.63
Bdnf-201ENSMUST00000053317 Sox16Q62247 57 aa4.89□□□□□ -1.63
Bdnf-201ENSMUST00000053317 ScxQ64124 207 aa4.89□□□□□ -1.63
Bdnf-201ENSMUST00000053317 H2al1eQ810S6 105 aa4.89□□□□□ -1.63
Bdnf-201ENSMUST00000053317 Gm5629P06327 117 aa4.88□□□□□ -1.63
Bdnf-201ENSMUST00000053317 FcorP0DJI6 106 aa4.88□□□□□ -1.63
Bdnf-201ENSMUST00000053317 Gm16223Q8CBM3 117 aa4.88□□□□□ -1.63
Bdnf-201ENSMUST00000053317 Rnf185Q91YT2 192 aa4.88□□□□□ -1.63
Bdnf-201ENSMUST00000053317 H2al1kJ3QP08 105 aa4.88□□□□□ -1.63
Bdnf-201ENSMUST00000053317 A0A1Y7VJ07 166 aa4.87□□□□□ -1.63
Bdnf-201ENSMUST00000053317 Gm10135F6TEE5 83 aa4.87□□□□□ -1.63
Bdnf-201ENSMUST00000053317 Rtl10D3YWW5 146 aa4.87□□□□□ -1.63
Bdnf-201ENSMUST00000053317 B230217C12RikE9Q3Z1 139 aa4.87□□□□□ -1.63
Bdnf-201ENSMUST00000053317 B430305J03RikQ8BQQ8 176 aa4.87□□□□□ -1.63
Bdnf-201ENSMUST00000053317 2010109I03RikQ9CQ11 111 aa4.87□□□□□ -1.63
Bdnf-201ENSMUST00000053317 Klk9Q32M27 251 aa4.87□□□□□ -1.63
Bdnf-201ENSMUST00000053317 Trbv13-2A0A140T8N6 113 aa4.86□□□□□ -1.63
Bdnf-201ENSMUST00000053317 Ube2d1P61080 147 aaKnown RBP4.86□□□□□ -1.63
Bdnf-201ENSMUST00000053317 Crip2Q9DCT8 208 aaKnown RBP4.86□□□□□ -1.63
Bdnf-201ENSMUST00000053317 Ighv1-59A0A0A6YXE0 117 aa4.86□□□□□ -1.63
Bdnf-201ENSMUST00000053317 Igkv1-88A0A140T8N1 120 aa4.86□□□□□ -1.63
Bdnf-201ENSMUST00000053317 Ndufc1Q9CQY9 76 aa4.86□□□□□ -1.63
Bdnf-201ENSMUST00000053317 Q9DAB9 146 aa4.86□□□□□ -1.63
Bdnf-201ENSMUST00000053317 9430015G10RikA2ASP7 199 aa4.86□□□□□ -1.63
Bdnf-201ENSMUST00000053317 Ube2d3P61079 147 aa4.86□□□□□ -1.63
Bdnf-201ENSMUST00000053317 Ube2d2P62838 147 aa4.86□□□□□ -1.63
Bdnf-201ENSMUST00000053317 Serp1Q9Z1W5 66 aa4.86□□□□□ -1.63
Bdnf-201ENSMUST00000053317 4930518I15RikQ3V2W7 57 aa4.86□□□□□ -1.63
Bdnf-201ENSMUST00000053317 H2al1bA0A087WP11 105 aa4.85□□□□□ -1.63
Bdnf-201ENSMUST00000053317 9530003J23RikQ8BM26 151 aa4.85□□□□□ -1.63
Bdnf-201ENSMUST00000053317 Ighv1-61P01749 117 aa4.84□□□□□ -1.63
Bdnf-201ENSMUST00000053317 Igkv3-9A0A140T8P4 119 aa4.84□□□□□ -1.63
Bdnf-201ENSMUST00000053317 Vpreb3D3Z6J4 130 aa4.84□□□□□ -1.63
Bdnf-201ENSMUST00000053317 Atox1O08997 68 aaKnown RBP4.84□□□□□ -1.63
Bdnf-201ENSMUST00000053317 P06320 134 aa4.84□□□□□ -1.64
Bdnf-201ENSMUST00000053317 Pglyrp1O88593 182 aa4.83□□□□□ -1.64
Bdnf-201ENSMUST00000053317 TshbP12656 138 aa4.83□□□□□ -1.64
Bdnf-201ENSMUST00000053317 Gm5153P01627 120 aa4.83□□□□□ -1.64
Bdnf-201ENSMUST00000053317 Fxyd5P97808 178 aa4.83□□□□□ -1.64
Bdnf-201ENSMUST00000053317 Tmem223Q9CQE2 199 aaKnown RBP4.83□□□□□ -1.64
Bdnf-201ENSMUST00000053317 Krtap26-1Q9D7N2 215 aa4.83□□□□□ -1.64
Bdnf-201ENSMUST00000053317 Ighv1-11A0A0A6YWI9 117 aa4.82□□□□□ -1.64
Bdnf-201ENSMUST00000053317 Igkv4-92A0A0B4J1I2 117 aa4.82□□□□□ -1.64
Bdnf-201ENSMUST00000053317 Ube2d4D3YUH6 135 aa4.82□□□□□ -1.64
Bdnf-201ENSMUST00000053317 Cox17P56394 63 aa4.82□□□□□ -1.64
Bdnf-201ENSMUST00000053317 Gm28374F6SG70 93 aa4.82□□□□□ -1.64
Bdnf-201ENSMUST00000053317 Trbv16A0A0B4J1H3 115 aa4.82□□□□□ -1.64
Bdnf-201ENSMUST00000053317 H2al1mQ9DAD9 105 aa4.82□□□□□ -1.64
Bdnf-201ENSMUST00000053317 Ighv1-75A0A075B5Y2 117 aa4.81□□□□□ -1.64
Bdnf-201ENSMUST00000053317 Gm37389A0A0A6YW05 95 aa4.81□□□□□ -1.64
Retrieved 100 of 22,080 RNA–protein pairs in 107.3 ms