RNA–Protein interactions for RNA: ENSMUST00000034868.13

Clk1-201, Transcript of Dual specificity protein kinase CLK1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1-201ENSMUST00000034868 Gm26965M0QWH4 86 aa3.46□□□□□ -1.86
Clk1-201ENSMUST00000034868 LeprotO89013 131 aa3.46□□□□□ -1.86
Clk1-201ENSMUST00000034868 BC025920Q3US60 128 aa3.46□□□□□ -1.86
Clk1-201ENSMUST00000034868 Odf1Q61999 247 aa3.46□□□□□ -1.86
Clk1-201ENSMUST00000034868 SpinklQ8CEK3 90 aa3.46□□□□□ -1.86
Clk1-201ENSMUST00000034868 Gm10308Q9CVR5 141 aa3.46□□□□□ -1.86
Clk1-201ENSMUST00000034868 Pla2g10Q9QXX3 151 aa3.46□□□□□ -1.86
Clk1-201ENSMUST00000034868 Abca2P41234 2434 aa3.46□□□□□ -1.86
Clk1-201ENSMUST00000034868 Muc5acE9QAQ8 3455 aa3.46□□□□□ -1.86
Clk1-201ENSMUST00000034868 Trav9n-4A0A075B631 113 aa3.46□□□□□ -1.86
Clk1-201ENSMUST00000034868 Gm17472A0A075B683 117 aa3.46□□□□□ -1.86
Clk1-201ENSMUST00000034868 Igkv5-37A0A140T8N4 115 aa3.46□□□□□ -1.86
Clk1-201ENSMUST00000034868 Med13Q5SWW4 2171 aa3.45□□□□□ -1.86
Clk1-201ENSMUST00000034868 Dmxl2Q8BPN8 3032 aa3.45□□□□□ -1.86
Clk1-201ENSMUST00000034868 FlncQ8VHX6 2726 aaKnown RBP3.45□□□□□ -1.86
Clk1-201ENSMUST00000034868 Ubald1Q6P3B2 176 aa3.45□□□□□ -1.86
Clk1-201ENSMUST00000034868 NpbQ8K4P1 119 aa3.45□□□□□ -1.86
Clk1-201ENSMUST00000034868 Smim29Q8R043 75 aa3.45□□□□□ -1.86
Clk1-201ENSMUST00000034868 Ankhd1E9PUR0 2548 aaKnown RBP3.44□□□□□ -1.86
Clk1-201ENSMUST00000034868 Ash1lQ99MY8 2958 aa3.44□□□□□ -1.86
Clk1-201ENSMUST00000034868 Igkv3-1A0A075B5P1 119 aa3.44□□□□□ -1.86
Clk1-201ENSMUST00000034868 Gm9736A0A1W2P7N1 277 aa3.44□□□□□ -1.86
Clk1-201ENSMUST00000034868 Cela2aP05208 271 aa3.44□□□□□ -1.86
Clk1-201ENSMUST00000034868 Cdc42se2Q8BGH7 84 aa3.44□□□□□ -1.86
Clk1-201ENSMUST00000034868 Q8K1L6 76 aa3.44□□□□□ -1.86
Clk1-201ENSMUST00000034868 Chd7A2AJK6 2986 aaKnown RBP3.44□□□□□ -1.86
Clk1-201ENSMUST00000034868 Gm9767G3X930 207 aa3.43□□□□□ -1.86
Clk1-201ENSMUST00000034868 Lect2O88803 151 aa3.43□□□□□ -1.86
Clk1-201ENSMUST00000034868 Rpl27aP14115 148 aaKnown RBP3.43□□□□□ -1.86
Clk1-201ENSMUST00000034868 Gm26566Q8CAC1 153 aa3.43□□□□□ -1.86
Clk1-201ENSMUST00000034868 EnhoQ8K1D8 76 aa3.43□□□□□ -1.86
Clk1-201ENSMUST00000034868 Tmem14cQ9CQN6 114 aa3.43□□□□□ -1.86
Clk1-201ENSMUST00000034868 Igkv1-35A0A0G2JDE5 120 aa3.43□□□□□ -1.86
Clk1-201ENSMUST00000034868 P06320 134 aa3.43□□□□□ -1.86
Clk1-201ENSMUST00000034868 Znrd1Q791N7 123 aa3.43□□□□□ -1.86
Clk1-201ENSMUST00000034868 Rnase2aQ8K196 155 aa3.43□□□□□ -1.86
Clk1-201ENSMUST00000034868 Zfp462B1AWL2 2495 aaKnown RBP3.42□□□□□ -1.86
Clk1-201ENSMUST00000034868 Zfhx4Q9JJN2 3550 aa3.42□□□□□ -1.86
Clk1-201ENSMUST00000034868 Pdzd2E9Q1M1 2796 aa3.42□□□□□ -1.86
Clk1-201ENSMUST00000034868 AtrQ9JKK8 2635 aa3.42□□□□□ -1.86
Clk1-201ENSMUST00000034868 Ighv1-56A0A0A6YXG2 117 aa3.42□□□□□ -1.86
Clk1-201ENSMUST00000034868 Igkv2-137A0A0B4J1H6 120 aa3.42□□□□□ -1.86
Clk1-201ENSMUST00000034868 Gm35549A0A0N4SUS7 141 aa3.42□□□□□ -1.86
Clk1-201ENSMUST00000034868 2310034G01RikA0A286YDL3 209 aa3.42□□□□□ -1.86
Clk1-201ENSMUST00000034868 Krtap1-5A2A590 122 aa3.42□□□□□ -1.86
Clk1-201ENSMUST00000034868 Ins2P01326 110 aa3.42□□□□□ -1.86
Clk1-201ENSMUST00000034868 Rmi2Q3UPE3 149 aa3.42□□□□□ -1.86
Clk1-201ENSMUST00000034868 Dopey1Q8BL99 2399 aa3.42□□□□□ -1.86
Clk1-201ENSMUST00000034868 Pkd1l3Q2EG98 2201 aa3.42□□□□□ -1.86
Clk1-201ENSMUST00000034868 Ighv2-3A0A075B696 115 aa3.41□□□□□ -1.86
Clk1-201ENSMUST00000034868 Igkv4-71A0A0G2JEH0 117 aa3.41□□□□□ -1.86
Clk1-201ENSMUST00000034868 Krtap27-1E9PX37 202 aa3.41□□□□□ -1.86
Clk1-201ENSMUST00000034868 IappP12968 93 aa3.41□□□□□ -1.86
Clk1-201ENSMUST00000034868 Gm7276Q3TYW4 209 aa3.41□□□□□ -1.86
Clk1-201ENSMUST00000034868 Gm21748Q3UE70 102 aa3.41□□□□□ -1.86
Clk1-201ENSMUST00000034868 Vmo1Q5SXG7 201 aa3.41□□□□□ -1.86
Clk1-201ENSMUST00000034868 Limd2Q8BGB5 128 aa3.41□□□□□ -1.86
Clk1-201ENSMUST00000034868 Q8BGJ3 129 aa3.41□□□□□ -1.86
Clk1-201ENSMUST00000034868 A730071L15RikQ8C4X0 137 aa3.41□□□□□ -1.86
Clk1-201ENSMUST00000034868 Fam229bQ8CF36 80 aa3.41□□□□□ -1.86
Clk1-201ENSMUST00000034868 Gm17509Q9CZ61 145 aa3.41□□□□□ -1.86
Clk1-201ENSMUST00000034868 Ifitm1Q9D103 106 aa3.41□□□□□ -1.86
Clk1-201ENSMUST00000034868 Tmem263Q9DAM7 115 aa3.41□□□□□ -1.86
Clk1-201ENSMUST00000034868 3110070M22RikQ9DAQ7 118 aa3.41□□□□□ -1.86
Clk1-201ENSMUST00000034868 Ubl5Q9EPV8 73 aa3.41□□□□□ -1.86
Clk1-201ENSMUST00000034868 Myo15aQ9QZZ4 3511 aa3.41□□□□□ -1.86
Clk1-201ENSMUST00000034868 Frem1Q684R7 2191 aa3.41□□□□□ -1.86
Clk1-201ENSMUST00000034868 Igkv6-13A0A0G2JGY3 119 aa3.4□□□□□ -1.86
Clk1-201ENSMUST00000034868 Igkv3-4A0A140T8Q4 119 aa3.4□□□□□ -1.86
Clk1-201ENSMUST00000034868 Gm10153A0A1B0GRL1 320 aa3.4□□□□□ -1.86
Clk1-201ENSMUST00000034868 U90926O08546 118 aa3.4□□□□□ -1.86
Clk1-201ENSMUST00000034868 Ang3P97802 145 aa3.4□□□□□ -1.86
Clk1-201ENSMUST00000034868 Gm10845Q3UNY9 185 aa3.4□□□□□ -1.86
Clk1-201ENSMUST00000034868 Ang5Q5GAN1 145 aa3.4□□□□□ -1.86
Clk1-201ENSMUST00000034868 EppinQ9DA01 134 aa3.4□□□□□ -1.86
Clk1-201ENSMUST00000034868 PolqQ8CGS6 2544 aa3.4□□□□□ -1.87
Clk1-201ENSMUST00000034868 Gm10521E9PZK0 135 aa3.4□□□□□ -1.87
Clk1-201ENSMUST00000034868 Ccl21bP86792 133 aa3.4□□□□□ -1.87
Clk1-201ENSMUST00000034868 Ccl21cP86793 133 aa3.4□□□□□ -1.87
Clk1-201ENSMUST00000034868 Urb1Q571H0 2274 aaKnown RBP3.39□□□□□ -1.87
Clk1-201ENSMUST00000034868 Vpreb3D3Z6J4 130 aa3.39□□□□□ -1.87
Clk1-201ENSMUST00000034868 Gm17455G3UW87 128 aa3.39□□□□□ -1.87
Clk1-201ENSMUST00000034868 Rnf5O35445 180 aa3.39□□□□□ -1.87
Clk1-201ENSMUST00000034868 Romo1P60603 79 aa3.39□□□□□ -1.87
Clk1-201ENSMUST00000034868 Gm10384Q3UQ87 92 aa3.39□□□□□ -1.87
Clk1-201ENSMUST00000034868 Polr2kQ63871 58 aa3.39□□□□□ -1.87
Clk1-201ENSMUST00000034868 Q8BT88 171 aa3.39□□□□□ -1.87
Clk1-201ENSMUST00000034868 Mpv17l2Q8VIK2 200 aa3.39□□□□□ -1.87
Clk1-201ENSMUST00000034868 Phpt1Q9DAK9 124 aa3.39□□□□□ -1.87
Clk1-201ENSMUST00000034868 FlnaQ8BTM8 2647 aaKnown RBP3.39□□□□□ -1.87
Clk1-201ENSMUST00000034868 Med13lQ6JPI3 2207 aa3.38□□□□□ -1.87
Clk1-201ENSMUST00000034868 Trav9d-1A0A075B699 112 aa3.38□□□□□ -1.87
Clk1-201ENSMUST00000034868 Igkv19-93A0A0G2JFZ3 115 aa3.38□□□□□ -1.87
Clk1-201ENSMUST00000034868 Gm17660B9UIU9 90 aa3.38□□□□□ -1.87
Clk1-201ENSMUST00000034868 Cnep1r1Q3UJ81 125 aa3.38□□□□□ -1.87
Clk1-201ENSMUST00000034868 Ang2Q64438 145 aa3.38□□□□□ -1.87
Clk1-201ENSMUST00000034868 Coa6Q8BGD8 79 aa3.38□□□□□ -1.87
Clk1-201ENSMUST00000034868 Ormdl1Q921I0 153 aa3.38□□□□□ -1.87
Clk1-201ENSMUST00000034868 Reg3dQ9QUS9 175 aa3.38□□□□□ -1.87
Clk1-201ENSMUST00000034868 Col6a5A6H584 2640 aa3.38□□□□□ -1.87
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms