RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Igkv4-58A0A0G2JGI6 119 aa12.2□□□□□ -0.46
Sqstm1-201ENSMUST00000015981 C530025M09RikF6RGA8 229 aa12.2□□□□□ -0.46
Sqstm1-201ENSMUST00000015981 2010109I03RikQ9CQ11 111 aa12.2□□□□□ -0.46
Sqstm1-201ENSMUST00000015981 Defb26Q30KN7 186 aa12.2□□□□□ -0.46
Sqstm1-201ENSMUST00000015981 Wnk1P83741 2377 aa12.2□□□□□ -0.46
Sqstm1-201ENSMUST00000015981 E130114P18RikF6S0S7 154 aa12.19□□□□□ -0.46
Sqstm1-201ENSMUST00000015981 Lamtor3O88653 124 aa12.18□□□□□ -0.46
Sqstm1-201ENSMUST00000015981 Dph3Q8K0W9 82 aa12.18□□□□□ -0.46
Sqstm1-201ENSMUST00000015981 Defa27F2Z403 93 aa12.18□□□□□ -0.46
Sqstm1-201ENSMUST00000015981 Gm17689B3GLJ4 109 aa12.17□□□□□ -0.46
Sqstm1-201ENSMUST00000015981 Defa20Q45VN2 95 aa12.17□□□□□ -0.46
Sqstm1-201ENSMUST00000015981 Pla2g1bQ9Z0Y2 146 aa12.17□□□□□ -0.46
Sqstm1-201ENSMUST00000015981 Usp9xP70398 2559 aaKnown RBP12.17□□□□□ -0.46
Sqstm1-201ENSMUST00000015981 Spink4O35679 86 aa12.17□□□□□ -0.46
Sqstm1-201ENSMUST00000015981 Prh1P05142 261 aa12.17□□□□□ -0.46
Sqstm1-201ENSMUST00000015981 Pet100P0DJE0 76 aa12.17□□□□□ -0.46
Sqstm1-201ENSMUST00000015981 NrgnP60761 78 aa12.16□□□□□ -0.46
Sqstm1-201ENSMUST00000015981 Higd2aQ9CQJ1 106 aa12.16□□□□□ -0.46
Sqstm1-201ENSMUST00000015981 Ighv10-1A0A0B4J1J6 119 aa12.15□□□□□ -0.46
Sqstm1-201ENSMUST00000015981 Ep300B2RWS6 2412 aa12.15□□□□□ -0.46
Sqstm1-201ENSMUST00000015981 Cox7bP56393 80 aa12.15□□□□□ -0.46
Sqstm1-201ENSMUST00000015981 A830005F24RikQ8BRT5 167 aa12.15□□□□□ -0.46
Sqstm1-201ENSMUST00000015981 NbasE9Q411 2356 aa12.15□□□□□ -0.46
Sqstm1-201ENSMUST00000015981 Gm10518F6UQQ9 182 aa12.14□□□□□ -0.47
Sqstm1-201ENSMUST00000015981 BC067074F6RXI4 2391 aa12.14□□□□□ -0.47
Sqstm1-201ENSMUST00000015981 Gm9805F6YK59 57 aa12.14□□□□□ -0.47
Sqstm1-201ENSMUST00000015981 C2cd3Q52KB6 2323 aa12.13□□□□□ -0.47
Sqstm1-201ENSMUST00000015981 4930556J24RikQ9D4U7 146 aa12.13□□□□□ -0.47
Sqstm1-201ENSMUST00000015981 Lyrm9Q3UN90 78 aa12.13□□□□□ -0.47
Sqstm1-201ENSMUST00000015981 Rbm3O89086 153 aaKnown RBP12.12□□□□□ -0.47
Sqstm1-201ENSMUST00000015981 Trav9n-4A0A075B631 113 aa12.12□□□□□ -0.47
Sqstm1-201ENSMUST00000015981 H2al1bA0A087WP11 105 aa12.12□□□□□ -0.47
Sqstm1-201ENSMUST00000015981 H2al1kJ3QP08 105 aa12.12□□□□□ -0.47
Sqstm1-201ENSMUST00000015981 H2al1eQ810S6 105 aa12.12□□□□□ -0.47
Sqstm1-201ENSMUST00000015981 9530003J23RikQ8BM26 151 aa12.12□□□□□ -0.47
Sqstm1-201ENSMUST00000015981 H2al1mQ9DAD9 105 aa12.12□□□□□ -0.47
Sqstm1-201ENSMUST00000015981 Igkv8-16A0A0G2JDG9 121 aa12.11□□□□□ -0.47
Sqstm1-201ENSMUST00000015981 Wfdc12Q9JHY3 85 aa12.11□□□□□ -0.47
Sqstm1-201ENSMUST00000015981 A530084C06RikQ3UTW2 186 aa12.1□□□□□ -0.47
Sqstm1-201ENSMUST00000015981 Mapk1ip1lQ8BH93 242 aa12.1□□□□□ -0.47
Sqstm1-201ENSMUST00000015981 FlncQ8VHX6 2726 aaKnown RBP12.1□□□□□ -0.47
Sqstm1-201ENSMUST00000015981 Reg3dQ9QUS9 175 aa12.1□□□□□ -0.47
Sqstm1-201ENSMUST00000015981 Gm9913Q8BQQ2 135 aa12.09□□□□□ -0.47
Sqstm1-201ENSMUST00000015981 A730071L15RikQ8C4X0 137 aa12.09□□□□□ -0.47
Sqstm1-201ENSMUST00000015981 Pde6gP09174 87 aa12.09□□□□□ -0.47
Sqstm1-201ENSMUST00000015981 E130218I03RikA0A0U1RNU5 63 aa12.08□□□□□ -0.48
Sqstm1-201ENSMUST00000015981 Ighv2-2A0A075B5P8 116 aa12.07□□□□□ -0.48
Sqstm1-201ENSMUST00000015981 P01821 116 aa12.07□□□□□ -0.48
Sqstm1-201ENSMUST00000015981 Defb18Q30KP5 85 aa12.07□□□□□ -0.48
Sqstm1-201ENSMUST00000015981 Psors1c2Q80ZC9 134 aa12.07□□□□□ -0.48
Sqstm1-201ENSMUST00000015981 Igkv8-34A0A0G2JDU0 121 aa12.06□□□□□ -0.48
Sqstm1-201ENSMUST00000015981 Msrb1Q9JLC3 116 aa12.06□□□□□ -0.48
Sqstm1-201ENSMUST00000015981 Chd8Q09XV5 2582 aaKnown RBP12.06□□□□□ -0.48
Sqstm1-201ENSMUST00000015981 UqcrqQ9CQ69 82 aa12.05□□□□□ -0.48
Sqstm1-201ENSMUST00000015981 Gm10770F7D043 238 aa12.04□□□□□ -0.48
Sqstm1-201ENSMUST00000015981 Tcl1b5P56845 121 aa12.04□□□□□ -0.48
Sqstm1-201ENSMUST00000015981 Zfyve26Q5DU37 2529 aa12.03□□□□□ -0.48
Sqstm1-201ENSMUST00000015981 Igkv8-24A0A140T8P5 121 aa12.03□□□□□ -0.48
Sqstm1-201ENSMUST00000015981 Vpreb2P13373 142 aa12.03□□□□□ -0.48
Sqstm1-201ENSMUST00000015981 PrcdQ00LT2 53 aa12.03□□□□□ -0.48
Sqstm1-201ENSMUST00000015981 Igkv4-54A0A0G2JES9 117 aa12.03□□□□□ -0.48
Sqstm1-201ENSMUST00000015981 Igkv4-61A0A0G2JH00 117 aa12.03□□□□□ -0.48
Sqstm1-201ENSMUST00000015981 Myo9aQ8C170 2542 aa12.02□□□□□ -0.49
Sqstm1-201ENSMUST00000015981 Ptpn13Q64512 2453 aa12.02□□□□□ -0.49
Sqstm1-201ENSMUST00000015981 Rif1Q6PR54 2419 aaKnown RBP12.02□□□□□ -0.49
Sqstm1-201ENSMUST00000015981 P06320 134 aa12.02□□□□□ -0.49
Sqstm1-201ENSMUST00000015981 Nf1Q04690 2841 aa12.01□□□□□ -0.49
Sqstm1-201ENSMUST00000015981 Gm11213A0A1B0GR83 88 aa12.01□□□□□ -0.49
Sqstm1-201ENSMUST00000015981 2310034G01RikA0A286YDL3 209 aa12□□□□□ -0.49
Sqstm1-201ENSMUST00000015981 Gm10401E9Q3K6 71 aa12□□□□□ -0.49
Sqstm1-201ENSMUST00000015981 Nbeal1E9PYP2 2688 aa11.99□□□□□ -0.49
Sqstm1-201ENSMUST00000015981 Gm37389A0A0A6YW05 95 aa11.99□□□□□ -0.49
Sqstm1-201ENSMUST00000015981 Gm10570F6VB42 170 aa11.99□□□□□ -0.49
Sqstm1-201ENSMUST00000015981 Igkv3-9A0A140T8P4 119 aa11.99□□□□□ -0.49
Sqstm1-201ENSMUST00000015981 AY074887Q8R5F9 132 aa11.98□□□□□ -0.49
Sqstm1-201ENSMUST00000015981 Igkv8-28A0A0G2JE47 121 aa11.97□□□□□ -0.49
Sqstm1-201ENSMUST00000015981 Pou2af1Q64693 256 aa11.97□□□□□ -0.49
Sqstm1-201ENSMUST00000015981 Usp24B1AY13 2617 aaKnown RBP11.97□□□□□ -0.49
Sqstm1-201ENSMUST00000015981 Spink8Q09TK9 105 aa11.96□□□□□ -0.49
Sqstm1-201ENSMUST00000015981 Akap13E9Q394 2776 aa11.96□□□□□ -0.49
Sqstm1-201ENSMUST00000015981 Bean1Q9EQG5 255 aa11.96□□□□□ -0.5
Sqstm1-201ENSMUST00000015981 Abca12E9Q876 2595 aa11.96□□□□□ -0.5
Sqstm1-201ENSMUST00000015981 Defa28D3Z1V9 94 aa11.95□□□□□ -0.5
Sqstm1-201ENSMUST00000015981 Q8BT88 171 aa11.94□□□□□ -0.5
Sqstm1-201ENSMUST00000015981 Bahcc1Q3UHR0 2643 aa11.93□□□□□ -0.5
Sqstm1-201ENSMUST00000015981 Gm11011D3Z3L9 86 aa11.92□□□□□ -0.5
Sqstm1-201ENSMUST00000015981 Krtap11-1E9Q2E9 183 aa11.92□□□□□ -0.5
Sqstm1-201ENSMUST00000015981 Hectd1Q69ZR2 2618 aaKnown RBP11.92□□□□□ -0.5
Sqstm1-201ENSMUST00000015981 Defb37Q7TMD2 62 aa11.92□□□□□ -0.5
Sqstm1-201ENSMUST00000015981 Xirp2Q4U4S6 3784 aa11.91□□□□□ -0.5
Sqstm1-201ENSMUST00000015981 Ankrd11E9Q4F7 2643 aa11.9□□□□□ -0.5
Sqstm1-201ENSMUST00000015981 Elof1P60003 83 aa11.9□□□□□ -0.5
Sqstm1-201ENSMUST00000015981 Ly6c2P0CW03 131 aa11.89□□□□□ -0.51
Sqstm1-201ENSMUST00000015981 A330070K13RikQ8CA53 115 aa11.89□□□□□ -0.51
Sqstm1-201ENSMUST00000015981 CubnQ9JLB4 3623 aa11.87□□□□□ -0.51
Sqstm1-201ENSMUST00000015981 Igkv1-88A0A140T8N1 120 aa11.86□□□□□ -0.51
Sqstm1-201ENSMUST00000015981 Prr15lQ8JZM2 100 aa11.86□□□□□ -0.51
Sqstm1-201ENSMUST00000015981 Ankrd17Q99NH0 2603 aaKnown RBP11.86□□□□□ -0.51
Sqstm1-201ENSMUST00000015981 Leap2Q91V13 76 aa11.85□□□□□ -0.51
Sqstm1-201ENSMUST00000015981 Ccl21aP84444 133 aa11.85□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 53.2 ms