RNA–Protein interactions for RNA: ENSMUST00000005509.10

Stx1a-201, Transcript of Syntaxin-1A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Stx1a, Length 2,162 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1a-201ENSMUST00000005509 Ssbp1Q9CYR0 152 aaKnown RBP11.95□□□□□ -0.5
Stx1a-201ENSMUST00000005509 Trav14-1A0A0G2JF94 121 aa11.95□□□□□ -0.5
Stx1a-201ENSMUST00000005509 Ccl17F6R5P4 103 aa11.95□□□□□ -0.5
Stx1a-201ENSMUST00000005509 Lect2O88803 151 aa11.95□□□□□ -0.5
Stx1a-201ENSMUST00000005509 Fam168bQ80XQ8 194 aa11.95□□□□□ -0.5
Stx1a-201ENSMUST00000005509 Dppa2Q9CWH0 301 aa11.95□□□□□ -0.5
Stx1a-201ENSMUST00000005509 2310009B15RikA0A0A6YWI4 143 aa11.94□□□□□ -0.5
Stx1a-201ENSMUST00000005509 Hbb-bsA8DUK4 147 aa11.94□□□□□ -0.5
Stx1a-201ENSMUST00000005509 Scgb1b19F6WYW0 93 aa11.94□□□□□ -0.5
Stx1a-201ENSMUST00000005509 Hbb-b1P02088 147 aa11.94□□□□□ -0.5
Stx1a-201ENSMUST00000005509 Isg15Q64339 161 aaKnown RBP11.94□□□□□ -0.5
Stx1a-201ENSMUST00000005509 Hist2h2beQ64524 126 aa11.94□□□□□ -0.5
Stx1a-201ENSMUST00000005509 Gpr15lA0A0B4J1N3 78 aa11.94□□□□□ -0.5
Stx1a-201ENSMUST00000005509 Igkv8-16A0A0G2JDG9 121 aa11.94□□□□□ -0.5
Stx1a-201ENSMUST00000005509 Iglc1A0A0G2JE99 106 aa11.94□□□□□ -0.5
Stx1a-201ENSMUST00000005509 Trav9d-4A0A0G2JG37 103 aa11.94□□□□□ -0.5
Stx1a-201ENSMUST00000005509 4930432M17RikQ3V0W9 174 aa11.94□□□□□ -0.5
Stx1a-201ENSMUST00000005509 4930544G11RikQ9CR99 193 aa11.94□□□□□ -0.5
Stx1a-201ENSMUST00000005509 Trav13-2A0A075B649 110 aa11.93□□□□□ -0.5
Stx1a-201ENSMUST00000005509 Abca13Q5SSE9 5034 aa11.93□□□□□ -0.5
Stx1a-201ENSMUST00000005509 Gm11627A6PWP4 55 aa11.92□□□□□ -0.5
Stx1a-201ENSMUST00000005509 Birc6O88738 4882 aa11.92□□□□□ -0.5
Stx1a-201ENSMUST00000005509 Inafm2A0A1L1STD6 152 aa11.92□□□□□ -0.5
Stx1a-201ENSMUST00000005509 Gm6812B1AXU1 112 aa11.92□□□□□ -0.5
Stx1a-201ENSMUST00000005509 Gm26727M0QWT1 121 aa11.92□□□□□ -0.5
Stx1a-201ENSMUST00000005509 MifP34884 115 aaKnown RBP11.91□□□□□ -0.5
Stx1a-201ENSMUST00000005509 Kiaa1109A2AAE1 5005 aa11.91□□□□□ -0.5
Stx1a-201ENSMUST00000005509 Plscr4P58196 326 aa11.91□□□□□ -0.5
Stx1a-201ENSMUST00000005509 Defa3P28310 93 aa11.9□□□□□ -0.5
Stx1a-201ENSMUST00000005509 Erg28Q9ERY9 140 aa11.9□□□□□ -0.5
Stx1a-201ENSMUST00000005509 Gm10295Q8CCF3 114 aa11.89□□□□□ -0.51
Stx1a-201ENSMUST00000005509 Triap1Q9D8Z2 76 aa11.89□□□□□ -0.51
Stx1a-201ENSMUST00000005509 Try10Q792Z1 246 aaKnown RBP11.89□□□□□ -0.51
Stx1a-201ENSMUST00000005509 Lrp1bQ9JI18 4599 aa11.88□□□□□ -0.51
Stx1a-201ENSMUST00000005509 Defb9Q8R2I6 67 aa11.88□□□□□ -0.51
Stx1a-201ENSMUST00000005509 Hbb-b2P02089 147 aa11.88□□□□□ -0.51
Stx1a-201ENSMUST00000005509 Morn5Q9DAI9 170 aa11.87□□□□□ -0.51
Stx1a-201ENSMUST00000005509 Trav4n-4A0A075B615 110 aa11.86□□□□□ -0.51
Stx1a-201ENSMUST00000005509 Gm867A0A1W2P7T4 151 aa11.86□□□□□ -0.51
Stx1a-201ENSMUST00000005509 Smim1P0C8K7 78 aa11.86□□□□□ -0.51
Stx1a-201ENSMUST00000005509 Fam19a5Q91WE9 132 aa11.86□□□□□ -0.51
Stx1a-201ENSMUST00000005509 Dpm2Q9Z324 84 aa11.86□□□□□ -0.51
Stx1a-201ENSMUST00000005509 Defa20Q45VN2 95 aa11.85□□□□□ -0.51
Stx1a-201ENSMUST00000005509 Zcchc13Q9D548 170 aa11.85□□□□□ -0.51
Stx1a-201ENSMUST00000005509 4930442H23RikQ9D5G7 103 aa11.85□□□□□ -0.51
Stx1a-201ENSMUST00000005509 Gm29289A0A087WPY7 166 aa11.84□□□□□ -0.51
Stx1a-201ENSMUST00000005509 Gm10518F6UQQ9 182 aa11.84□□□□□ -0.51
Stx1a-201ENSMUST00000005509 Pfn2Q9JJV2 140 aa11.84□□□□□ -0.51
Stx1a-201ENSMUST00000005509 Fam19a1Q7TPG8 133 aa11.84□□□□□ -0.51
Stx1a-201ENSMUST00000005509 PkigO70139 76 aa11.83□□□□□ -0.52
Stx1a-201ENSMUST00000005509 Phf5aP83870 110 aaKnown RBP11.82□□□□□ -0.52
Stx1a-201ENSMUST00000005509 Adm2Q7TNK8 150 aa11.82□□□□□ -0.52
Stx1a-201ENSMUST00000005509 Mzt1Q8BUR9 78 aa11.82□□□□□ -0.52
Stx1a-201ENSMUST00000005509 C920008G01RikA0A0B4J1N1 112 aa11.82□□□□□ -0.52
Stx1a-201ENSMUST00000005509 Wfdc6bF6ULY1 148 aa11.82□□□□□ -0.52
Stx1a-201ENSMUST00000005509 Trav4-3A0A0B4J1K1 110 aa11.81□□□□□ -0.52
Stx1a-201ENSMUST00000005509 1700011M02RikB1AX35 88 aa11.81□□□□□ -0.52
Stx1a-201ENSMUST00000005509 Hectd4E9Q2E4 4418 aa11.81□□□□□ -0.52
Stx1a-201ENSMUST00000005509 Defb45Q3V490 66 aa11.81□□□□□ -0.52
Stx1a-201ENSMUST00000005509 RetnlbQ99P86 105 aa11.81□□□□□ -0.52
Stx1a-201ENSMUST00000005509 PcloQ9QYX7 5068 aa11.8□□□□□ -0.52
Stx1a-201ENSMUST00000005509 Reg3dQ9QUS9 175 aa11.8□□□□□ -0.52
Stx1a-201ENSMUST00000005509 Ighv2-2A0A075B5P8 116 aa11.79□□□□□ -0.52
Stx1a-201ENSMUST00000005509 Ighv2-5A0A0A6YY69 116 aa11.79□□□□□ -0.52
Stx1a-201ENSMUST00000005509 P01821 116 aa11.79□□□□□ -0.52
Stx1a-201ENSMUST00000005509 Gm11020F6ZGD5 61 aa11.79□□□□□ -0.52
Stx1a-201ENSMUST00000005509 Defa13P50711 93 aa11.79□□□□□ -0.52
Stx1a-201ENSMUST00000005509 Ntn5Q3UQ22 452 aa11.79□□□□□ -0.52
Stx1a-201ENSMUST00000005509 Lrp1Q91ZX7 4545 aaKnown RBP11.78□□□□□ -0.52
Stx1a-201ENSMUST00000005509 Obox2E9PXV9 151 aa11.78□□□□□ -0.52
Stx1a-201ENSMUST00000005509 Gm9903Q8C9Y8 129 aa11.78□□□□□ -0.52
Stx1a-201ENSMUST00000005509 A330070K13RikQ8CA53 115 aa11.78□□□□□ -0.52
Stx1a-201ENSMUST00000005509 Pglyrp4Q0VB07 374 aa11.78□□□□□ -0.52
Stx1a-201ENSMUST00000005509 HrnrQ8VHD8 2496 aa11.77□□□□□ -0.52
Stx1a-201ENSMUST00000005509 Klk12B2RVZ0 247 aa11.77□□□□□ -0.53
Stx1a-201ENSMUST00000005509 BC107364E9Q5A2 140 aa11.77□□□□□ -0.53
Stx1a-201ENSMUST00000005509 Defa4P28311 92 aa11.77□□□□□ -0.53
Stx1a-201ENSMUST00000005509 Defa7P50705 93 aa11.77□□□□□ -0.53
Stx1a-201ENSMUST00000005509 Uqcc3Q8K2T4 89 aa11.77□□□□□ -0.53
Stx1a-201ENSMUST00000005509 HydinQ80W93 5154 aa11.77□□□□□ -0.53
Stx1a-201ENSMUST00000005509 Pkhd1l1Q80ZA4 4249 aa11.77□□□□□ -0.53
Stx1a-201ENSMUST00000005509 Sostdc1Q9CQN4 206 aa11.77□□□□□ -0.53
Stx1a-201ENSMUST00000005509 1700010B08RikQ9DAI7 102 aa11.77□□□□□ -0.53
Stx1a-201ENSMUST00000005509 Krtap14O08640 167 aa11.76□□□□□ -0.53
Stx1a-201ENSMUST00000005509 Vamp8O70404 101 aa11.76□□□□□ -0.53
Stx1a-201ENSMUST00000005509 Vpreb2P13373 142 aa11.76□□□□□ -0.53
Stx1a-201ENSMUST00000005509 Tcl1b5P56845 121 aa11.76□□□□□ -0.53
Stx1a-201ENSMUST00000005509 P01819 144 aa11.75□□□□□ -0.53
Stx1a-201ENSMUST00000005509 Igkv1-88A0A140T8N1 120 aa11.74□□□□□ -0.53
Stx1a-201ENSMUST00000005509 Ube2d4D3YUH6 135 aa11.74□□□□□ -0.53
Stx1a-201ENSMUST00000005509 Krtap19-5O08632 62 aa11.74□□□□□ -0.53
Stx1a-201ENSMUST00000005509 Fat2Q5F226 4351 aa11.73□□□□□ -0.53
Stx1a-201ENSMUST00000005509 Tal2Q62282 108 aa11.72□□□□□ -0.53
Stx1a-201ENSMUST00000005509 Smim29Q8R043 75 aa11.72□□□□□ -0.53
Stx1a-201ENSMUST00000005509 Fat3Q8BNA6 4555 aa11.71□□□□□ -0.53
Stx1a-201ENSMUST00000005509 Rpl18aP62717 176 aaKnown RBP11.71□□□□□ -0.53
Stx1a-201ENSMUST00000005509 NbdyA0A0N4SUI7 68 aa11.71□□□□□ -0.54
Stx1a-201ENSMUST00000005509 Prol1E9PYQ4 312 aa11.7□□□□□ -0.54
Stx1a-201ENSMUST00000005509 Rpl28P41105 137 aaKnown RBP11.7□□□□□ -0.54
Stx1a-201ENSMUST00000005509 Timm17bQ9Z0V7 172 aa11.7□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 7.9 ms