RNA–Protein interactions for RNA: ENSMUST00000005509.10

Stx1a-201, Transcript of Syntaxin-1A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Stx1a, Length 2,162 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1a-201ENSMUST00000005509 Gm35339A0A140LHH9 1649 aa41.97■■■■■ 4.31
Stx1a-201ENSMUST00000005509 NischQ80TM9 1593 aa41.71■■■■■ 4.27
Stx1a-201ENSMUST00000005509 Abcc9P70170 1546 aa40.32■■■■■ 4.05
Stx1a-201ENSMUST00000005509 Abcc8B2RUS7 1588 aa40.22■■■■■ 4.03
Stx1a-201ENSMUST00000005509 ScribQ80U72 1612 aa38.64■■■■□ 3.78
Stx1a-201ENSMUST00000005509 Kdm5dQ62240 1548 aa37.42■■■■□ 3.58
Stx1a-201ENSMUST00000005509 NacadQ5SWP3 1504 aa37.38■■■■□ 3.57
Stx1a-201ENSMUST00000005509 Dcaf1Q80TR8 1506 aa36.93■■■■□ 3.5
Stx1a-201ENSMUST00000005509 Sycp2Q9CUU3 1500 aa36.66■■■■□ 3.46
Stx1a-201ENSMUST00000005509 Rhox8Q6VSS7 320 aa36.56■■■■□ 3.44
Stx1a-201ENSMUST00000005509 Rb1cc1Q9ESK9 1588 aa36.37■■■■□ 3.41
Stx1a-201ENSMUST00000005509 BicraF8VPZ9 1578 aa36.17■■■■□ 3.38
Stx1a-201ENSMUST00000005509 Baz1aO88379 1555 aa35.83■■■■□ 3.33
Stx1a-201ENSMUST00000005509 Ccdc180J3QNE4 1664 aa35.7■■■■□ 3.31
Stx1a-201ENSMUST00000005509 Crybg2B7ZCC2 1516 aa35.56■■■■□ 3.28
Stx1a-201ENSMUST00000005509 Zcchc6Q5BLK4 1491 aaKnown RBP35.39■■■■□ 3.26
Stx1a-201ENSMUST00000005509 Pds5bQ4VA53 1446 aaKnown RBP34.99■■■■□ 3.19
Stx1a-201ENSMUST00000005509 Dnajc5bQ9CQ94 199 aa34.98■■■■□ 3.19
Stx1a-201ENSMUST00000005509 Smarca2Q6DIC0 1577 aa34.82■■■■□ 3.17
Stx1a-201ENSMUST00000005509 Cecr2E9Q2Z1 1453 aa34.75■■■■□ 3.15
Stx1a-201ENSMUST00000005509 Atad2bE9Q166 1460 aaKnown RBP34.75■■■■□ 3.15
Stx1a-201ENSMUST00000005509 Smarca4Q3TKT4 1613 aaKnown RBP34.59■■■■□ 3.13
Stx1a-201ENSMUST00000005509 Thoc2B1AZI6 1594 aaKnown RBP34.59■■■■□ 3.13
Stx1a-201ENSMUST00000005509 Rtl1Q7M732 1744 aa34.52■■■■□ 3.12
Stx1a-201ENSMUST00000005509 Iqgap2Q3UQ44 1575 aa34.39■■■■□ 3.1
Stx1a-201ENSMUST00000005509 Ercc6F8VPZ5 1481 aa34.27■■■■□ 3.08
Stx1a-201ENSMUST00000005509 Ccdc136Q3TVA9 1136 aa34.25■■■■□ 3.07
Stx1a-201ENSMUST00000005509 Cc2d2aQ8CFW7 1633 aa34.16■■■■□ 3.06
Stx1a-201ENSMUST00000005509 Frmpd1A2AKB4 1549 aa34.04■■■■□ 3.04
Stx1a-201ENSMUST00000005509 Wdr62Q3U3T8 1523 aa34.02■■■■□ 3.04
Stx1a-201ENSMUST00000005509 Synj1Q8CHC4 1574 aa33.92■■■■□ 3.02
Stx1a-201ENSMUST00000005509 CftrP26361 1476 aa33.91■■■■□ 3.02
Stx1a-201ENSMUST00000005509 Brd4Q9ESU6 1400 aaKnown RBP33.86■■■■□ 3.01
Stx1a-201ENSMUST00000005509 Fam135aQ6NS59 1506 aa33.84■■■■□ 3.01
Stx1a-201ENSMUST00000005509 Cttnbp2B9EJA2 1648 aa33.8■■■■□ 3
Stx1a-201ENSMUST00000005509 Phldb1Q6PDH0 1371 aaKnown RBP33.74■■■□□ 2.99
Stx1a-201ENSMUST00000005509 Unc13aQ4KUS2 1712 aa33.62■■■□□ 2.97
Stx1a-201ENSMUST00000005509 Ubl4bQ9CQ84 188 aa33.57■■■□□ 2.96
Stx1a-201ENSMUST00000005509 Trim41Q5NCC3 630 aa33.52■■■□□ 2.96
Stx1a-201ENSMUST00000005509 Esf1Q3V1V3 845 aaKnown RBP33.5■■■□□ 2.95
Stx1a-201ENSMUST00000005509 Baz1bQ9Z277 1479 aa33.22■■■□□ 2.91
Stx1a-201ENSMUST00000005509 Mrc2Q64449 1479 aa33.11■■■□□ 2.89
Stx1a-201ENSMUST00000005509 Rsf1E9PWW9 1441 aaKnown RBP32.98■■■□□ 2.87
Stx1a-201ENSMUST00000005509 Kif15Q6P9L6 1387 aa32.97■■■□□ 2.87
Stx1a-201ENSMUST00000005509 Cngb1E1AZ71 1325 aa32.88■■■□□ 2.85
Stx1a-201ENSMUST00000005509 Cux2P70298 1426 aa32.87■■■□□ 2.85
Stx1a-201ENSMUST00000005509 Golga3P55937 1487 aa32.82■■■□□ 2.84
Stx1a-201ENSMUST00000005509 Lamc3Q9R0B6 1581 aa32.8■■■□□ 2.84
Stx1a-201ENSMUST00000005509 Top2bQ64511 1612 aa32.73■■■□□ 2.83
Stx1a-201ENSMUST00000005509 Npm1Q61937 292 aaKnown RBP32.59■■■□□ 2.81
Stx1a-201ENSMUST00000005509 Kif21aQ9QXL2 1672 aa32.53■■■□□ 2.8
Stx1a-201ENSMUST00000005509 Il27Q8K3I6 234 aa32.51■■■□□ 2.8
Stx1a-201ENSMUST00000005509 TnnQ80Z71 1560 aa32.5■■■□□ 2.79
Stx1a-201ENSMUST00000005509 Lrriq1Q0P5X1 1673 aa32.42■■■□□ 2.78
Stx1a-201ENSMUST00000005509 Cep164Q5DU05 1446 aa32.38■■■□□ 2.77
Stx1a-201ENSMUST00000005509 Fmn1Q05860 1466 aa32.34■■■□□ 2.77
Stx1a-201ENSMUST00000005509 Ccdc18Q640L5 1455 aa32.33■■■□□ 2.77
Stx1a-201ENSMUST00000005509 Camsap1A2AHC3 1581 aa32.28■■■□□ 2.76
Stx1a-201ENSMUST00000005509 Dhx29Q6PGC1 1365 aaKnown RBP32.19■■■□□ 2.74
Stx1a-201ENSMUST00000005509 LrpprcQ6PB66 1392 aaKnown RBP32.17■■■□□ 2.74
Stx1a-201ENSMUST00000005509 Ccdc88bQ4QRL3 1481 aa32.16■■■□□ 2.74
Stx1a-201ENSMUST00000005509 Chic1Q8CBW7 227 aa32.07■■■□□ 2.72
Stx1a-201ENSMUST00000005509 Plb1Q3TTY0 1478 aa32.05■■■□□ 2.72
Stx1a-201ENSMUST00000005509 Urb2E9Q7L1 1524 aaKnown RBP32.04■■■□□ 2.72
Stx1a-201ENSMUST00000005509 Crocc2F6XLV1 1638 aa31.98■■■□□ 2.71
Stx1a-201ENSMUST00000005509 PogzQ8BZH4 1409 aaKnown RBP31.98■■■□□ 2.71
Stx1a-201ENSMUST00000005509 Grin2bQ01097 1482 aa31.89■■■□□ 2.7
Stx1a-201ENSMUST00000005509 Duox2A2AQ99 1517 aa31.88■■■□□ 2.69
Stx1a-201ENSMUST00000005509 Eif4g3Q80XI3 1579 aaKnown RBP31.87■■■□□ 2.69
Stx1a-201ENSMUST00000005509 Top2aQ01320 1528 aaKnown RBP31.81■■■□□ 2.68
Stx1a-201ENSMUST00000005509 Ift140E9PY46 1464 aa31.65■■■□□ 2.66
Stx1a-201ENSMUST00000005509 Efcab5A0JP43 1406 aa31.64■■■□□ 2.66
Stx1a-201ENSMUST00000005509 Samd9lQ69Z37 1561 aa31.63■■■□□ 2.65
Stx1a-201ENSMUST00000005509 PtprkP35822 1457 aa31.58■■■□□ 2.65
Stx1a-201ENSMUST00000005509 Disp1Q3TDN0 1521 aa31.58■■■□□ 2.65
Stx1a-201ENSMUST00000005509 NrkQ9R0G8 1455 aa31.56■■■□□ 2.64
Stx1a-201ENSMUST00000005509 Setd1bQ8CFT2 1985 aa31.5■■■□□ 2.63
Stx1a-201ENSMUST00000005509 Rad54l2Q99NG0 1466 aa31.5■■■□□ 2.63
Stx1a-201ENSMUST00000005509 HrcG5E8J6 738 aa31.5■■■□□ 2.63
Stx1a-201ENSMUST00000005509 Rusc2Q80U22 1514 aa31.48■■■□□ 2.63
Stx1a-201ENSMUST00000005509 Shroom4Q1W617 1475 aa31.46■■■□□ 2.63
Stx1a-201ENSMUST00000005509 Gab3Q8BSM5 595 aa31.38■■■□□ 2.61
Stx1a-201ENSMUST00000005509 Nup160Q9Z0W3 1402 aaKnown RBP31.37■■■□□ 2.61
Stx1a-201ENSMUST00000005509 Zeb1Q64318 1117 aa31.32■■■□□ 2.6
Stx1a-201ENSMUST00000005509 Magi3Q9EQJ9 1476 aa31.31■■■□□ 2.6
Stx1a-201ENSMUST00000005509 Npm2Q80W85 207 aa31.3■■■□□ 2.6
Stx1a-201ENSMUST00000005509 Grin2aP35436 1464 aa31.3■■■□□ 2.6
Stx1a-201ENSMUST00000005509 Pbrm1Q8BSQ9 1634 aaKnown RBP31.28■■■□□ 2.6
Stx1a-201ENSMUST00000005509 Shroom2A2ALU4 1481 aa31.27■■■□□ 2.6
Stx1a-201ENSMUST00000005509 Cc2d2bA0A286YDU8 1405 aa31.27■■■□□ 2.6
Stx1a-201ENSMUST00000005509 SynmQ70IV5 1561 aa31.2■■■□□ 2.59
Stx1a-201ENSMUST00000005509 Pabpn1Q8CCS6 302 aaKnown RBP31.18■■■□□ 2.58
Stx1a-201ENSMUST00000005509 Pla2r1Q62028 1487 aa31.16■■■□□ 2.58
Stx1a-201ENSMUST00000005509 Pelp1Q9DBD5 1123 aaKnown RBP31.15■■■□□ 2.58
Stx1a-201ENSMUST00000005509 Dnajc5P60904 198 aa31.15■■■□□ 2.58
Stx1a-201ENSMUST00000005509 Rapgef2Q8CHG7 1496 aa31.11■■■□□ 2.57
Stx1a-201ENSMUST00000005509 AqrQ8CFQ3 1481 aaKnown RBP31.09■■■□□ 2.57
Stx1a-201ENSMUST00000005509 Mroh2bQ7M6Y6 1581 aa31.09■■■□□ 2.57
Stx1a-201ENSMUST00000005509 Arhgap35Q91YM2 1499 aa30.95■■■□□ 2.54
Stx1a-201ENSMUST00000005509 Fgd6Q69ZL1 1399 aa30.93■■■□□ 2.54
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms