RNA–Protein interactions for RNA: ENSMUST00000199896.1

Smarcc1-207, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,773 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-207ENSMUST00000199896 Gm3443F7CCV5 94 aa13.06□□□□□ -0.32
Smarcc1-207ENSMUST00000199896 Gm10509O88255 85 aa13.06□□□□□ -0.32
Smarcc1-207ENSMUST00000199896 Ube2d1P61080 147 aaKnown RBP13.06□□□□□ -0.32
Smarcc1-207ENSMUST00000199896 Igkv3-12A0A140T8P0 119 aa13.06□□□□□ -0.32
Smarcc1-207ENSMUST00000199896 Ypel4Q65Z93 127 aa13.06□□□□□ -0.32
Smarcc1-207ENSMUST00000199896 Rnf152Q8BG47 203 aa13.06□□□□□ -0.32
Smarcc1-207ENSMUST00000199896 TrrapQ80YV3 2565 aaKnown RBP13.05□□□□□ -0.32
Smarcc1-207ENSMUST00000199896 Igkv8-30A0A140T8M3 121 aa13.05□□□□□ -0.32
Smarcc1-207ENSMUST00000199896 Cdc42se2Q8BGH7 84 aa13.04□□□□□ -0.32
Smarcc1-207ENSMUST00000199896 Zfp462B1AWL2 2495 aaKnown RBP13.04□□□□□ -0.32
Smarcc1-207ENSMUST00000199896 Cd27P41272 250 aa13.03□□□□□ -0.32
Smarcc1-207ENSMUST00000199896 TroQ6DIC6 2087 aa13.03□□□□□ -0.32
Smarcc1-207ENSMUST00000199896 Gm11011D3Z3L9 86 aa13.03□□□□□ -0.32
Smarcc1-207ENSMUST00000199896 B230217C12RikE9Q3Z1 139 aa13.02□□□□□ -0.32
Smarcc1-207ENSMUST00000199896 BaalcQ8VHV1 145 aa13.02□□□□□ -0.33
Smarcc1-207ENSMUST00000199896 Tns1E9Q0S6 1888 aaKnown RBP13.02□□□□□ -0.33
Smarcc1-207ENSMUST00000199896 1700011M02RikB1AX35 88 aa13.01□□□□□ -0.33
Smarcc1-207ENSMUST00000199896 Ndufc1Q9CQY9 76 aa13.01□□□□□ -0.33
Smarcc1-207ENSMUST00000199896 Gm10322F7D7I4 111 aa13.01□□□□□ -0.33
Smarcc1-207ENSMUST00000199896 Cd164l2Q9D6W7 172 aa13.01□□□□□ -0.33
Smarcc1-207ENSMUST00000199896 Rpl28P41105 137 aaKnown RBP13□□□□□ -0.33
Smarcc1-207ENSMUST00000199896 Smim20D3Z7Q2 69 aa12.98□□□□□ -0.33
Smarcc1-207ENSMUST00000199896 CtrlQ9ER05 264 aa12.98□□□□□ -0.33
Smarcc1-207ENSMUST00000199896 Znf706Q9D115 76 aaKnown RBP12.98□□□□□ -0.33
Smarcc1-207ENSMUST00000199896 Gm5464Q3UY29 175 aa12.96□□□□□ -0.34
Smarcc1-207ENSMUST00000199896 Wdr38Q9D994 303 aa12.96□□□□□ -0.34
Smarcc1-207ENSMUST00000199896 Smim1P0C8K7 78 aa12.95□□□□□ -0.34
Smarcc1-207ENSMUST00000199896 CnfnQ6PCW6 111 aa12.95□□□□□ -0.34
Smarcc1-207ENSMUST00000199896 Gm20604F8WIA3 75 aa12.95□□□□□ -0.34
Smarcc1-207ENSMUST00000199896 Gm10577Q3UDV9 132 aa12.95□□□□□ -0.34
Smarcc1-207ENSMUST00000199896 Ighv2-9-1A0A075B697 116 aa12.94□□□□□ -0.34
Smarcc1-207ENSMUST00000199896 Gm1968Q3T9I3 115 aa12.94□□□□□ -0.34
Smarcc1-207ENSMUST00000199896 Prr9Q8BV84 116 aa12.94□□□□□ -0.34
Smarcc1-207ENSMUST00000199896 B430305J03RikQ8BQQ8 176 aa12.94□□□□□ -0.34
Smarcc1-207ENSMUST00000199896 Ighv8-11A0A075B5X4 119 aa12.94□□□□□ -0.34
Smarcc1-207ENSMUST00000199896 1600014C23RikQ9DAX4 101 aa12.94□□□□□ -0.34
Smarcc1-207ENSMUST00000199896 Wfdc3Q14AE4 130 aa12.92□□□□□ -0.34
Smarcc1-207ENSMUST00000199896 Trav14-1A0A0G2JF94 121 aa12.92□□□□□ -0.34
Smarcc1-207ENSMUST00000199896 BtcQ05928 177 aa12.92□□□□□ -0.34
Smarcc1-207ENSMUST00000199896 Tmem213Q08EA8 116 aa12.91□□□□□ -0.34
Smarcc1-207ENSMUST00000199896 SetxA2AKX3 2646 aa12.9□□□□□ -0.34
Smarcc1-207ENSMUST00000199896 Setd2E9Q5F9 2537 aa12.9□□□□□ -0.34
Smarcc1-207ENSMUST00000199896 SrarpQ3ULG3 163 aa12.9□□□□□ -0.34
Smarcc1-207ENSMUST00000199896 Pla2g2eQ9QUL3 142 aa12.9□□□□□ -0.34
Smarcc1-207ENSMUST00000199896 Atox1O08997 68 aaKnown RBP12.9□□□□□ -0.35
Smarcc1-207ENSMUST00000199896 Gm10300Q8C8P7 189 aa12.89□□□□□ -0.35
Smarcc1-207ENSMUST00000199896 SvipQ3UZP4 77 aa12.89□□□□□ -0.35
Smarcc1-207ENSMUST00000199896 Adm2Q7TNK8 150 aa12.89□□□□□ -0.35
Smarcc1-207ENSMUST00000199896 Ndufs5Q99LY9 106 aa12.89□□□□□ -0.35
Smarcc1-207ENSMUST00000199896 H2al1bA0A087WP11 105 aa12.88□□□□□ -0.35
Smarcc1-207ENSMUST00000199896 Krtap27-1E9PX37 202 aa12.88□□□□□ -0.35
Smarcc1-207ENSMUST00000199896 TeppQ6IMH0 216 aa12.87□□□□□ -0.35
Smarcc1-207ENSMUST00000199896 4930556J24RikQ9D4U7 146 aa12.87□□□□□ -0.35
Smarcc1-207ENSMUST00000199896 Kiaa1549Q68FD9 1940 aa12.86□□□□□ -0.35
Smarcc1-207ENSMUST00000199896 Gm28374F6SG70 93 aa12.86□□□□□ -0.35
Smarcc1-207ENSMUST00000199896 Gm16485Q8C4B7 115 aa12.86□□□□□ -0.35
Smarcc1-207ENSMUST00000199896 P84750 121 aa12.86□□□□□ -0.35
Smarcc1-207ENSMUST00000199896 Ighv2-9A0A075B5Q5 116 aa12.85□□□□□ -0.35
Smarcc1-207ENSMUST00000199896 Igkv8-28A0A0G2JE47 121 aa12.85□□□□□ -0.35
Smarcc1-207ENSMUST00000199896 Ighv8-13A0A075B5Y0 101 aa12.84□□□□□ -0.35
Smarcc1-207ENSMUST00000199896 Apoc4Q61268 124 aa12.84□□□□□ -0.35
Smarcc1-207ENSMUST00000199896 Bahcc1Q3UHR0 2643 aa12.84□□□□□ -0.35
Smarcc1-207ENSMUST00000199896 A0A286YE49 62 aa12.83□□□□□ -0.36
Smarcc1-207ENSMUST00000199896 Q9DAB9 146 aa12.83□□□□□ -0.36
Smarcc1-207ENSMUST00000199896 Gm9573F7C950 1606 aa12.82□□□□□ -0.36
Smarcc1-207ENSMUST00000199896 PolqQ8CGS6 2544 aa12.82□□□□□ -0.36
Smarcc1-207ENSMUST00000199896 CdsnQ7TPC1 561 aa12.81□□□□□ -0.36
Smarcc1-207ENSMUST00000199896 Igkv3-7A0A0G2JE31 119 aa12.81□□□□□ -0.36
Smarcc1-207ENSMUST00000199896 Ifitm6A0A1B0GS75 124 aa12.81□□□□□ -0.36
Smarcc1-207ENSMUST00000199896 PtprbB2RU80 1998 aa12.81□□□□□ -0.36
Smarcc1-207ENSMUST00000199896 Lrp4Q8VI56 1905 aa12.8□□□□□ -0.36
Smarcc1-207ENSMUST00000199896 MtorQ9JLN9 2549 aa12.79□□□□□ -0.36
Smarcc1-207ENSMUST00000199896 Gm9887F6RFI0 207 aa12.79□□□□□ -0.36
Smarcc1-207ENSMUST00000199896 Wfdc6bF6ULY1 148 aa12.79□□□□□ -0.36
Smarcc1-207ENSMUST00000199896 Defb38Q7TNV7 63 aa12.79□□□□□ -0.36
Smarcc1-207ENSMUST00000199896 Gm5142Q8C5X9 133 aa12.79□□□□□ -0.36
Smarcc1-207ENSMUST00000199896 Crip2Q9DCT8 208 aaKnown RBP12.78□□□□□ -0.36
Smarcc1-207ENSMUST00000199896 C130032M10RikQ8C888 123 aa12.78□□□□□ -0.36
Smarcc1-207ENSMUST00000199896 Gm10267M0QWD8 85 aa12.77□□□□□ -0.36
Smarcc1-207ENSMUST00000199896 H2al1aQ5M8Q2 105 aa12.77□□□□□ -0.36
Smarcc1-207ENSMUST00000199896 H2al1eQ810S6 105 aa12.77□□□□□ -0.36
Smarcc1-207ENSMUST00000199896 1700074P13RikQ9D9G7 251 aa12.77□□□□□ -0.37
Smarcc1-207ENSMUST00000199896 Gm17509Q9CZ61 145 aa12.75□□□□□ -0.37
Smarcc1-207ENSMUST00000199896 Rtl10D3YWW5 146 aa12.75□□□□□ -0.37
Smarcc1-207ENSMUST00000199896 Serp2Q6TAW2 65 aa12.75□□□□□ -0.37
Smarcc1-207ENSMUST00000199896 Vpreb1P13372 142 aa12.74□□□□□ -0.37
Smarcc1-207ENSMUST00000199896 4930432M17RikQ3V0W9 174 aa12.74□□□□□ -0.37
Smarcc1-207ENSMUST00000199896 4930524J08RikQ9CUJ5 163 aa12.74□□□□□ -0.37
Smarcc1-207ENSMUST00000199896 Gm28539A0A087WSL9 92 aa12.74□□□□□ -0.37
Smarcc1-207ENSMUST00000199896 Sprr2jO70561 109 aa12.72□□□□□ -0.37
Smarcc1-207ENSMUST00000199896 Odf3l2Q3TZ65 277 aa12.71□□□□□ -0.37
Smarcc1-207ENSMUST00000199896 Wfdc17Q5SSJ1 76 aa12.71□□□□□ -0.38
Smarcc1-207ENSMUST00000199896 Psmb11Q8BG41 302 aa12.71□□□□□ -0.38
Smarcc1-207ENSMUST00000199896 H2al1mQ9DAD9 105 aa12.69□□□□□ -0.38
Smarcc1-207ENSMUST00000199896 Col4a2P08122 1707 aa12.69□□□□□ -0.38
Smarcc1-207ENSMUST00000199896 Ndufb1P0DN34 57 aa12.69□□□□□ -0.38
Smarcc1-207ENSMUST00000199896 2310009B15RikA0A0A6YWI4 143 aa12.68□□□□□ -0.38
Smarcc1-207ENSMUST00000199896 Srsf12Q8C8K3 266 aa12.67□□□□□ -0.38
Smarcc1-207ENSMUST00000199896 Gm5153P01627 120 aa12.67□□□□□ -0.38
Smarcc1-207ENSMUST00000199896 Gm10845Q3UNY9 185 aa12.67□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 49.7 ms