RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 P01643 108 aa13,79□□□□□ -0,2
Trim71-201ENSMUST00000111816 9230109A22RikQ8BHE6 111 aa13,79□□□□□ -0,2
Trim71-201ENSMUST00000111816 Limd2Q8BGB5 128 aa13,78□□□□□ -0,2
Trim71-201ENSMUST00000111816 P04944 107 aa13,78□□□□□ -0,2
Trim71-201ENSMUST00000111816 Gm21060J3KMU4 56 aa13,77□□□□□ -0,21
Trim71-201ENSMUST00000111816 SycnQ8VCK7 134 aa13,76□□□□□ -0,21
Trim71-201ENSMUST00000111816 Coa6Q8BGD8 79 aa13,76□□□□□ -0,21
Trim71-201ENSMUST00000111816 MsmpB1AWI6 139 aa13,76□□□□□ -0,21
Trim71-201ENSMUST00000111816 ScxQ64124 207 aa13,76□□□□□ -0,21
Trim71-201ENSMUST00000111816 Fgfbp3Q1HCM0 245 aa13,76□□□□□ -0,21
Trim71-201ENSMUST00000111816 P01820 115 aa13,75□□□□□ -0,21
Trim71-201ENSMUST00000111816 Smr3aQ61900 147 aa13,74□□□□□ -0,21
Trim71-201ENSMUST00000111816 FshbQ60687 130 aa13,74□□□□□ -0,21
Trim71-201ENSMUST00000111816 P01747 120 aa13,74□□□□□ -0,21
Trim71-201ENSMUST00000111816 3110082J24RikF6Z6Z2 108 aa13,73□□□□□ -0,21
Trim71-201ENSMUST00000111816 Q9D8Q6 235 aa13,73□□□□□ -0,21
Trim71-201ENSMUST00000111816 P04943 107 aa13,73□□□□□ -0,21
Trim71-201ENSMUST00000111816 2010109I03RikQ9CQ11 111 aa13,73□□□□□ -0,21
Trim71-201ENSMUST00000111816 FcorP0DJI6 106 aa13,72□□□□□ -0,21
Trim71-201ENSMUST00000111816 E130114P18RikF6S0S7 154 aa13,72□□□□□ -0,21
Trim71-201ENSMUST00000111816 Ovol3D3YYM0 189 aa13,72□□□□□ -0,21
Trim71-201ENSMUST00000111816 Foxs1Q61574 329 aa13,72□□□□□ -0,21
Trim71-201ENSMUST00000111816 Trbv13-2A0A140T8N6 113 aa13,72□□□□□ -0,21
Trim71-201ENSMUST00000111816 Ankrd17Q99NH0 2603 aaKnown RBP13,71□□□□□ -0,21
Trim71-201ENSMUST00000111816 Map6d1Q14BB9 191 aa13,71□□□□□ -0,21
Trim71-201ENSMUST00000111816 Gm10643Q3URG9 111 aa13,71□□□□□ -0,21
Trim71-201ENSMUST00000111816 Crip1P63254 77 aa13,71□□□□□ -0,21
Trim71-201ENSMUST00000111816 Gm9958Q8C9U4 106 aa13,71□□□□□ -0,21
Trim71-201ENSMUST00000111816 Gm10322F7D7I4 111 aa13,7□□□□□ -0,22
Trim71-201ENSMUST00000111816 Bean1Q9EQG5 255 aa13,7□□□□□ -0,22
Trim71-201ENSMUST00000111816 E030018B13RikJ3QMS9 113 aa13,69□□□□□ -0,22
Trim71-201ENSMUST00000111816 Wfdc13Q5DQQ6 81 aa13,69□□□□□ -0,22
Trim71-201ENSMUST00000111816 Gm4707V9GXN5 68 aa13,69□□□□□ -0,22
Trim71-201ENSMUST00000111816 Ighv1-72P01751 139 aa13,68□□□□□ -0,22
Trim71-201ENSMUST00000111816 4930524J08RikQ9CUJ5 163 aa13,68□□□□□ -0,22
Trim71-201ENSMUST00000111816 4930432M17RikQ3V0W9 174 aa13,68□□□□□ -0,22
Trim71-201ENSMUST00000111816 Spry4Q9WTP2 300 aa13,67□□□□□ -0,22
Trim71-201ENSMUST00000111816 Nupr2Q497P3 102 aa13,67□□□□□ -0,22
Trim71-201ENSMUST00000111816 FasnP19096 2504 aaKnown RBP13,67□□□□□ -0,22
Trim71-201ENSMUST00000111816 2310009B15RikA0A0A6YWI4 143 aa13,66□□□□□ -0,22
Trim71-201ENSMUST00000111816 Ntn5Q3UQ22 452 aa13,66□□□□□ -0,22
Trim71-201ENSMUST00000111816 Myo18bE9PV66 2605 aa13,65□□□□□ -0,23
Trim71-201ENSMUST00000111816 Zfand3Q497H0 227 aa13,63□□□□□ -0,23
Trim71-201ENSMUST00000111816 A530084C06RikQ3UTW2 186 aa13,63□□□□□ -0,23
Trim71-201ENSMUST00000111816 4930556J24RikQ9D4U7 146 aa13,63□□□□□ -0,23
Trim71-201ENSMUST00000111816 Znf414Q9DCK4 299 aa13,63□□□□□ -0,23
Trim71-201ENSMUST00000111816 Chchd7Q8K2Q5 85 aa13,62□□□□□ -0,23
Trim71-201ENSMUST00000111816 Ighv3-3A0A0A6YWL2 116 aa13,61□□□□□ -0,23
Trim71-201ENSMUST00000111816 Cyyr1Q8VIH7 165 aa13,61□□□□□ -0,23
Trim71-201ENSMUST00000111816 Ighv1-59A0A0A6YXE0 117 aa13,61□□□□□ -0,23
Trim71-201ENSMUST00000111816 Sostdc1Q9CQN4 206 aa13,61□□□□□ -0,23
Trim71-201ENSMUST00000111816 Gm9949Q8C9F4 104 aa13,6□□□□□ -0,23
Trim71-201ENSMUST00000111816 Defb38Q7TNV7 63 aa13,6□□□□□ -0,23
Trim71-201ENSMUST00000111816 Wfdc3Q14AE4 130 aa13,59□□□□□ -0,23
Trim71-201ENSMUST00000111816 GrnP28798 589 aaKnown RBP13,59□□□□□ -0,23
Trim71-201ENSMUST00000111816 Ighv2-9-1A0A075B697 116 aa13,58□□□□□ -0,23
Trim71-201ENSMUST00000111816 Ighv2-5A0A0A6YY69 116 aa13,58□□□□□ -0,23
Trim71-201ENSMUST00000111816 Sprr3O09116 238 aa13,58□□□□□ -0,24
Trim71-201ENSMUST00000111816 Ighv1-56A0A0A6YXG2 117 aa13,57□□□□□ -0,24
Trim71-201ENSMUST00000111816 Gm9913Q8BQQ2 135 aa13,56□□□□□ -0,24
Trim71-201ENSMUST00000111816 Wfdc12Q9JHY3 85 aa13,56□□□□□ -0,24
Trim71-201ENSMUST00000111816 BC025920Q3US60 128 aa13,56□□□□□ -0,24
Trim71-201ENSMUST00000111816 Crip2Q9DCT8 208 aaKnown RBP13,56□□□□□ -0,24
Trim71-201ENSMUST00000111816 Cdip1Q9DB75 208 aa13,56□□□□□ -0,24
Trim71-201ENSMUST00000111816 1700011M02RikB1AX35 88 aa13,55□□□□□ -0,24
Trim71-201ENSMUST00000111816 P06329 120 aa13,55□□□□□ -0,24
Trim71-201ENSMUST00000111816 Ighv1-66A0A075B5X5 117 aa13,55□□□□□ -0,24
Trim71-201ENSMUST00000111816 Krtap16-1A2A5X5 502 aa13,54□□□□□ -0,24
Trim71-201ENSMUST00000111816 9130230L23RikQ8CC80 163 aa13,54□□□□□ -0,24
Trim71-201ENSMUST00000111816 Gm10197F6QEY5 67 aa13,53□□□□□ -0,24
Trim71-201ENSMUST00000111816 Cep192E9Q4Y4 2514 aaKnown RBP13,53□□□□□ -0,24
Trim71-201ENSMUST00000111816 A730009L09RikA0A1B0GS82 72 aa13,52□□□□□ -0,24
Trim71-201ENSMUST00000111816 Defb37Q7TMD2 62 aa13,51□□□□□ -0,25
Trim71-201ENSMUST00000111816 Gm10845Q3UNY9 185 aa13,51□□□□□ -0,25
Trim71-201ENSMUST00000111816 Gm10160F6Y577 67 aa13,51□□□□□ -0,25
Trim71-201ENSMUST00000111816 P01819 144 aa13,5□□□□□ -0,25
Trim71-201ENSMUST00000111816 Gm26566Q8CAC1 153 aa13,5□□□□□ -0,25
Trim71-201ENSMUST00000111816 SbsponQ3UPR9 264 aa13,5□□□□□ -0,25
Trim71-201ENSMUST00000111816 Shisa2Q8QZV2 295 aa13,5□□□□□ -0,25
Trim71-201ENSMUST00000111816 CnfnQ6PCW6 111 aa13,49□□□□□ -0,25
Trim71-201ENSMUST00000111816 Q9CX25 107 aa13,49□□□□□ -0,25
Trim71-201ENSMUST00000111816 Unc79Q0KK59 2596 aa13,48□□□□□ -0,25
Trim71-201ENSMUST00000111816 Ighv2-3A0A075B696 115 aa13,48□□□□□ -0,25
Trim71-201ENSMUST00000111816 Gm10549Q3URY4 149 aa13,48□□□□□ -0,25
Trim71-201ENSMUST00000111816 NrgnP60761 78 aa13,47□□□□□ -0,25
Trim71-201ENSMUST00000111816 P01659 112 aa13,47□□□□□ -0,25
Trim71-201ENSMUST00000111816 SrarpQ3ULG3 163 aa13,46□□□□□ -0,25
Trim71-201ENSMUST00000111816 Pla2g1bQ9Z0Y2 146 aa13,46□□□□□ -0,25
Trim71-201ENSMUST00000111816 Wfdc17Q5SSJ1 76 aa13,46□□□□□ -0,26
Trim71-201ENSMUST00000111816 P01755 137 aa13,45□□□□□ -0,26
Trim71-201ENSMUST00000111816 TshbP12656 138 aa13,45□□□□□ -0,26
Trim71-201ENSMUST00000111816 Akap13E9Q394 2776 aa13,45□□□□□ -0,26
Trim71-201ENSMUST00000111816 Thsd7bQ6P4U0 1607 aa13,45□□□□□ -0,26
Trim71-201ENSMUST00000111816 Nsun4C4P6S0 806 aaKnown RBP13,44□□□□□ -0,26
Trim71-201ENSMUST00000111816 Gm5142Q8C5X9 133 aa13,44□□□□□ -0,26
Trim71-201ENSMUST00000111816 Adm2Q7TNK8 150 aa13,44□□□□□ -0,26
Trim71-201ENSMUST00000111816 Znf239P24399 201 aa13,43□□□□□ -0,26
Trim71-201ENSMUST00000111816 Ighv2-9A0A075B5Q5 116 aa13,43□□□□□ -0,26
Trim71-201ENSMUST00000111816 Igkv8-27A0A0G2JF28 120 aa13,43□□□□□ -0,26
Trim71-201ENSMUST00000111816 Ly6c2P0CW03 131 aa13,43□□□□□ -0,26
Retrieved 100 of 22,080 RNA–protein pairs in 40,2 ms