RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Dpm2Q9Z324 84 aa8.35□□□□□ -1.07
Trim50-202ENSMUST00000111180 Scgb1b11A0A087WQJ0 93 aa8.34□□□□□ -1.07
Trim50-202ENSMUST00000111180 Fgf6P21658 208 aa8.34□□□□□ -1.07
Trim50-202ENSMUST00000111180 Mfap4Q9D1H9 257 aa8.34□□□□□ -1.07
Trim50-202ENSMUST00000111180 Trav13-4-dv7A0A075B6C2 110 aa8.33□□□□□ -1.08
Trim50-202ENSMUST00000111180 Trav4-3A0A0B4J1K1 110 aa8.33□□□□□ -1.08
Trim50-202ENSMUST00000111180 Gm11213A0A1B0GR83 88 aa8.33□□□□□ -1.08
Trim50-202ENSMUST00000111180 Gm42674D3YUT9 64 aa8.33□□□□□ -1.08
Trim50-202ENSMUST00000111180 U90926O08546 118 aa8.33□□□□□ -1.08
Trim50-202ENSMUST00000111180 Vamp8O70404 101 aa8.33□□□□□ -1.08
Trim50-202ENSMUST00000111180 Ighv1-61P01749 117 aa8.33□□□□□ -1.08
Trim50-202ENSMUST00000111180 P01823 113 aa8.33□□□□□ -1.08
Trim50-202ENSMUST00000111180 SrarpQ3ULG3 163 aa8.33□□□□□ -1.08
Trim50-202ENSMUST00000111180 SpinklQ8CEK3 90 aa8.33□□□□□ -1.08
Trim50-202ENSMUST00000111180 Zfand2aQ9JII7 171 aa8.33□□□□□ -1.08
Trim50-202ENSMUST00000111180 Trav13d-4A0A0G2JFX3 110 aa8.32□□□□□ -1.08
Trim50-202ENSMUST00000111180 Gm45753A0A1C7CYU8 86 aa8.32□□□□□ -1.08
Trim50-202ENSMUST00000111180 Prh1P05142 261 aa8.32□□□□□ -1.08
Trim50-202ENSMUST00000111180 Smim1P0C8K7 78 aa8.32□□□□□ -1.08
Trim50-202ENSMUST00000111180 Bsph2Q0Q236 131 aa8.32□□□□□ -1.08
Trim50-202ENSMUST00000111180 Krtap11-1E9Q2E9 183 aa8.32□□□□□ -1.08
Trim50-202ENSMUST00000111180 Insl3O09107 122 aa8.32□□□□□ -1.08
Trim50-202ENSMUST00000111180 Q9DAQ5 155 aa8.32□□□□□ -1.08
Trim50-202ENSMUST00000111180 Ighv13-2A0A0A6YWN3 119 aa8.31□□□□□ -1.08
Trim50-202ENSMUST00000111180 Tmem238A9JSM3 176 aa8.31□□□□□ -1.08
Trim50-202ENSMUST00000111180 2310061N02RikQ9D6S9 174 aa8.31□□□□□ -1.08
Trim50-202ENSMUST00000111180 Fgf23Q9EPC2 251 aa8.31□□□□□ -1.08
Trim50-202ENSMUST00000111180 Trav11A0A0B4J1J9 114 aa8.3□□□□□ -1.08
Trim50-202ENSMUST00000111180 Tal2Q62282 108 aa8.3□□□□□ -1.08
Trim50-202ENSMUST00000111180 Tspan13Q9D8C2 204 aa8.3□□□□□ -1.08
Trim50-202ENSMUST00000111180 SacsQ9JLC8 4582 aa8.29□□□□□ -1.08
Trim50-202ENSMUST00000111180 Gm44965A0A0N4SVR3 59 aa8.29□□□□□ -1.08
Trim50-202ENSMUST00000111180 Gm11027G8JL69 66 aa8.29□□□□□ -1.08
Trim50-202ENSMUST00000111180 Lect2O88803 151 aa8.29□□□□□ -1.08
Trim50-202ENSMUST00000111180 P01896 185 aa8.29□□□□□ -1.08
Trim50-202ENSMUST00000111180 S100a8P27005 89 aa8.29□□□□□ -1.08
Trim50-202ENSMUST00000111180 Gm5617Q91VN2 117 aa8.29□□□□□ -1.08
Trim50-202ENSMUST00000111180 Pkd1O08852 4293 aa8.29□□□□□ -1.08
Trim50-202ENSMUST00000111180 Dnah2P0C6F1 4456 aa8.28□□□□□ -1.08
Trim50-202ENSMUST00000111180 Gm20730A0A075B5J6 119 aa8.28□□□□□ -1.08
Trim50-202ENSMUST00000111180 Iglc1A0A0G2JE99 106 aa8.28□□□□□ -1.08
Trim50-202ENSMUST00000111180 Tmem86bQ497J1 226 aa8.28□□□□□ -1.08
Trim50-202ENSMUST00000111180 Mzt1Q8BUR9 78 aa8.28□□□□□ -1.08
Trim50-202ENSMUST00000111180 Gm29289A0A087WPY7 166 aa8.27□□□□□ -1.09
Trim50-202ENSMUST00000111180 Gm35549A0A0N4SUS7 141 aa8.27□□□□□ -1.09
Trim50-202ENSMUST00000111180 Prss58Q8BW11 241 aa8.27□□□□□ -1.09
Trim50-202ENSMUST00000111180 Isg15Q64339 161 aaKnown RBP8.26□□□□□ -1.09
Trim50-202ENSMUST00000111180 Gm16485Q8C4B7 115 aa8.26□□□□□ -1.09
Trim50-202ENSMUST00000111180 Triap1Q9D8Z2 76 aa8.26□□□□□ -1.09
Trim50-202ENSMUST00000111180 Morn5Q9DAI9 170 aa8.26□□□□□ -1.09
Trim50-202ENSMUST00000111180 Erg28Q9ERY9 140 aa8.26□□□□□ -1.09
Trim50-202ENSMUST00000111180 Dnah9B1AR51 4484 aa8.26□□□□□ -1.09
Trim50-202ENSMUST00000111180 Gm2696A0A1W2P709 240 aa8.26□□□□□ -1.09
Trim50-202ENSMUST00000111180 AponG3X9D6 251 aa8.26□□□□□ -1.09
Trim50-202ENSMUST00000111180 Scgb1b3J3QJY4 93 aa8.26□□□□□ -1.09
Trim50-202ENSMUST00000111180 Cks1bP61025 79 aa8.26□□□□□ -1.09
Trim50-202ENSMUST00000111180 Rmi2Q3UPE3 149 aa8.26□□□□□ -1.09
Trim50-202ENSMUST00000111180 Defb45Q3V490 66 aa8.26□□□□□ -1.09
Trim50-202ENSMUST00000111180 4930432M17RikQ3V0W9 174 aa8.25□□□□□ -1.09
Trim50-202ENSMUST00000111180 1700010B08RikQ9DAI7 102 aa8.25□□□□□ -1.09
Trim50-202ENSMUST00000111180 Trav4d-3A0A075B625 110 aa8.24□□□□□ -1.09
Trim50-202ENSMUST00000111180 Ighv1-56A0A0A6YXG2 117 aa8.24□□□□□ -1.09
Trim50-202ENSMUST00000111180 Cops9Q3U898 57 aa8.24□□□□□ -1.09
Trim50-202ENSMUST00000111180 Defb50Q6TU36 73 aa8.24□□□□□ -1.09
Trim50-202ENSMUST00000111180 Timm17bQ9Z0V7 172 aa8.24□□□□□ -1.09
Trim50-202ENSMUST00000111180 Igkv8-24A0A140T8P5 121 aa8.23□□□□□ -1.09
Trim50-202ENSMUST00000111180 Defa15P50713 93 aa8.23□□□□□ -1.09
Trim50-202ENSMUST00000111180 5930422O12RikQ8C4Y4 123 aa8.23□□□□□ -1.09
Trim50-202ENSMUST00000111180 Dync1h1Q9JHU4 4644 aaKnown RBP8.23□□□□□ -1.09
Trim50-202ENSMUST00000111180 Ndufa12Q7TMF3 145 aaKnown RBP8.22□□□□□ -1.09
Trim50-202ENSMUST00000111180 Cox7b2Q9D2H1 82 aa8.22□□□□□ -1.09
Trim50-202ENSMUST00000111180 Gm867A0A1W2P7T4 151 aa8.21□□□□□ -1.09
Trim50-202ENSMUST00000111180 Gm6812B1AXU1 112 aa8.21□□□□□ -1.09
Trim50-202ENSMUST00000111180 Tcl1b5P56845 121 aa8.21□□□□□ -1.09
Trim50-202ENSMUST00000111180 Vmn1r197Q8R265 298 aa8.21□□□□□ -1.09
Trim50-202ENSMUST00000111180 Dnah11E9Q7N9 4488 aa8.21□□□□□ -1.1
Trim50-202ENSMUST00000111180 Ighv2-9A0A075B5Q5 116 aa8.2□□□□□ -1.1
Trim50-202ENSMUST00000111180 Trav9d-4A0A0G2JG37 103 aa8.2□□□□□ -1.1
Trim50-202ENSMUST00000111180 Smim13E9Q942 88 aa8.2□□□□□ -1.1
Trim50-202ENSMUST00000111180 Rpl24Q8BP67 157 aaKnown RBP8.2□□□□□ -1.1
Trim50-202ENSMUST00000111180 A0A286YCQ8 80 aa8.19□□□□□ -1.1
Trim50-202ENSMUST00000111180 Cox8cA6H666 72 aa8.19□□□□□ -1.1
Trim50-202ENSMUST00000111180 Gm6793B2RXM2 351 aa8.19□□□□□ -1.1
Trim50-202ENSMUST00000111180 4930556J24RikQ9D4U7 146 aa8.19□□□□□ -1.1
Trim50-202ENSMUST00000111180 BC107364E9Q5A2 140 aa8.19□□□□□ -1.1
Trim50-202ENSMUST00000111180 Gm26727M0QWT1 121 aa8.19□□□□□ -1.1
Trim50-202ENSMUST00000111180 P01755 137 aa8.19□□□□□ -1.1
Trim50-202ENSMUST00000111180 Defa22Q8C1N8 93 aa8.19□□□□□ -1.1
Trim50-202ENSMUST00000111180 4930544G11RikQ9CR99 193 aa8.19□□□□□ -1.1
Trim50-202ENSMUST00000111180 Dppa2Q9CWH0 301 aa8.19□□□□□ -1.1
Trim50-202ENSMUST00000111180 Gemin7Q9CWY4 129 aa8.19□□□□□ -1.1
Trim50-202ENSMUST00000111180 C920008G01RikA0A0B4J1N1 112 aa8.18□□□□□ -1.1
Trim50-202ENSMUST00000111180 Plscr4P58196 326 aa8.18□□□□□ -1.1
Trim50-202ENSMUST00000111180 Srsf9Q9D0B0 222 aaKnown RBP8.18□□□□□ -1.1
Trim50-202ENSMUST00000111180 Gm10577Q3UDV9 132 aa8.17□□□□□ -1.1
Trim50-202ENSMUST00000111180 Dnah5Q8VHE6 4621 aa8.16□□□□□ -1.1
Trim50-202ENSMUST00000111180 9430015G10RikA2ASP7 199 aa8.16□□□□□ -1.1
Trim50-202ENSMUST00000111180 Wfdc21Q8BTE6 63 aa8.16□□□□□ -1.1
Trim50-202ENSMUST00000111180 Gm9903Q8C9Y8 129 aa8.16□□□□□ -1.1
Trim50-202ENSMUST00000111180 Tac4Q99N14 128 aa8.16□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 79.2 ms