RNA–Protein interactions for RNA: ENSMUST00000023759.4

Smarcd1-201, Transcript of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smarcd1, Length 3,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1-201ENSMUST00000023759 Defa23Q5G866 93 aa11.12□□□□□ -0.63
Smarcd1-201ENSMUST00000023759 Igkv6-13A0A0G2JGY3 119 aa11.12□□□□□ -0.63
Smarcd1-201ENSMUST00000023759 MalO09198 153 aa11.12□□□□□ -0.63
Smarcd1-201ENSMUST00000023759 Ighv1-49A0A0A6YWX2 117 aa11.12□□□□□ -0.63
Smarcd1-201ENSMUST00000023759 CirbpP60824 172 aaKnown RBP11.12□□□□□ -0.63
Smarcd1-201ENSMUST00000023759 Tomm7Q9D173 55 aa11.12□□□□□ -0.63
Smarcd1-201ENSMUST00000023759 Col7a1Q63870 2944 aa11.11□□□□□ -0.63
Smarcd1-201ENSMUST00000023759 Xcl1P47993 114 aa11.11□□□□□ -0.63
Smarcd1-201ENSMUST00000023759 Gm10647E9Q8X0 124 aa11.1□□□□□ -0.63
Smarcd1-201ENSMUST00000023759 Trav13d-4A0A0G2JFX3 110 aa11.1□□□□□ -0.63
Smarcd1-201ENSMUST00000023759 1700011M02RikB1AX35 88 aa11.1□□□□□ -0.63
Smarcd1-201ENSMUST00000023759 Ighv1-62-1A0A075B5U3 116 aa11.1□□□□□ -0.63
Smarcd1-201ENSMUST00000023759 Rpl36aP83882 106 aaKnown RBP11.09□□□□□ -0.63
Smarcd1-201ENSMUST00000023759 4930535I16RikQ9CUI2 172 aa11.09□□□□□ -0.63
Smarcd1-201ENSMUST00000023759 Rnase1P00683 149 aa11.08□□□□□ -0.64
Smarcd1-201ENSMUST00000023759 Lst1O08843 95 aa11.08□□□□□ -0.64
Smarcd1-201ENSMUST00000023759 CrygdP04342 174 aa11.08□□□□□ -0.64
Smarcd1-201ENSMUST00000023759 Trav11A0A0B4J1J9 114 aa11.08□□□□□ -0.64
Smarcd1-201ENSMUST00000023759 Trav13-1A0A075B644 110 aa11.07□□□□□ -0.64
Smarcd1-201ENSMUST00000023759 Tmem243B2RVB9 118 aa11.07□□□□□ -0.64
Smarcd1-201ENSMUST00000023759 7530416G11RikJ3QJX6 159 aa11.06□□□□□ -0.64
Smarcd1-201ENSMUST00000023759 Hist1h4aP62806 103 aaKnown RBP11.06□□□□□ -0.64
Smarcd1-201ENSMUST00000023759 P01755 137 aa11.06□□□□□ -0.64
Smarcd1-201ENSMUST00000023759 Cox17P56394 63 aa11.06□□□□□ -0.64
Smarcd1-201ENSMUST00000023759 Fgfbp3Q1HCM0 245 aa11.06□□□□□ -0.64
Smarcd1-201ENSMUST00000023759 Trav13n-2A0A0G2JF93 110 aa11.06□□□□□ -0.64
Smarcd1-201ENSMUST00000023759 Plac8l1Q08EJ0 177 aa11.06□□□□□ -0.64
Smarcd1-201ENSMUST00000023759 Brk1Q91VR8 75 aa11.06□□□□□ -0.64
Smarcd1-201ENSMUST00000023759 Gm8439G3UWA7 96 aa11.05□□□□□ -0.64
Smarcd1-201ENSMUST00000023759 Srsf12Q8C8K3 266 aa11.05□□□□□ -0.64
Smarcd1-201ENSMUST00000023759 5730596B20RikQ8BQ08 205 aa11.04□□□□□ -0.64
Smarcd1-201ENSMUST00000023759 Lypd5Q9D7Z7 256 aa11.04□□□□□ -0.64
Smarcd1-201ENSMUST00000023759 Gm3233E9Q2H5 230 aa11.04□□□□□ -0.64
Smarcd1-201ENSMUST00000023759 Q99M08 65 aa11.04□□□□□ -0.64
Smarcd1-201ENSMUST00000023759 Smim26Q3V460 107 aa11.03□□□□□ -0.64
Smarcd1-201ENSMUST00000023759 Ndufa12Q7TMF3 145 aaKnown RBP11.03□□□□□ -0.64
Smarcd1-201ENSMUST00000023759 Cdc42se2Q8BGH7 84 aa11.03□□□□□ -0.64
Smarcd1-201ENSMUST00000023759 Defa20Q45VN2 95 aa11.03□□□□□ -0.64
Smarcd1-201ENSMUST00000023759 Samd13D3YUG0 102 aa11.02□□□□□ -0.65
Smarcd1-201ENSMUST00000023759 Defb42Q8BVB5 75 aa11.02□□□□□ -0.65
Smarcd1-201ENSMUST00000023759 Tfpi2O35536 230 aa11.02□□□□□ -0.65
Smarcd1-201ENSMUST00000023759 1700010B08RikQ9DAI7 102 aa11.02□□□□□ -0.65
Smarcd1-201ENSMUST00000023759 Gm17472A0A075B683 117 aa11.01□□□□□ -0.65
Smarcd1-201ENSMUST00000023759 Dnal4Q9DCM4 105 aa11.01□□□□□ -0.65
Smarcd1-201ENSMUST00000023759 Igkv1-117A0A140T8M0 119 aa11□□□□□ -0.65
Smarcd1-201ENSMUST00000023759 PemtQ61907 199 aa11□□□□□ -0.65
Smarcd1-201ENSMUST00000023759 Cystm1Q8K353 104 aa11□□□□□ -0.65
Smarcd1-201ENSMUST00000023759 Hbb-b2P02089 147 aa11□□□□□ -0.65
Smarcd1-201ENSMUST00000023759 Mast4Q811L6 2618 aa10.99□□□□□ -0.65
Smarcd1-201ENSMUST00000023759 Q8R092 253 aa10.99□□□□□ -0.65
Smarcd1-201ENSMUST00000023759 4930442H23RikQ9D5G7 103 aa10.98□□□□□ -0.65
Smarcd1-201ENSMUST00000023759 Timm17bQ9Z0V7 172 aa10.98□□□□□ -0.65
Smarcd1-201ENSMUST00000023759 Fam19a5Q91WE9 132 aa10.98□□□□□ -0.65
Smarcd1-201ENSMUST00000023759 2010109I03RikQ9CQ11 111 aa10.98□□□□□ -0.65
Smarcd1-201ENSMUST00000023759 Gm11565A2A4M7 156 aa10.97□□□□□ -0.65
Smarcd1-201ENSMUST00000023759 Klk11Q9QYN3 276 aa10.97□□□□□ -0.65
Smarcd1-201ENSMUST00000023759 Notch1Q01705 2531 aa10.97□□□□□ -0.65
Smarcd1-201ENSMUST00000023759 B230307C23RikQ8BLB2 64 aa10.96□□□□□ -0.65
Smarcd1-201ENSMUST00000023759 Trav13-2A0A075B649 110 aa10.96□□□□□ -0.66
Smarcd1-201ENSMUST00000023759 PtprqP0C5E4 2300 aa10.96□□□□□ -0.66
Smarcd1-201ENSMUST00000023759 Defb2P82020 71 aa10.96□□□□□ -0.66
Smarcd1-201ENSMUST00000023759 Ppp1r32Q148A4 427 aa10.95□□□□□ -0.66
Smarcd1-201ENSMUST00000023759 Trav4-3A0A0B4J1K1 110 aa10.94□□□□□ -0.66
Smarcd1-201ENSMUST00000023759 Spata25Q9DA57 226 aa10.94□□□□□ -0.66
Smarcd1-201ENSMUST00000023759 Pla2g1bQ9Z0Y2 146 aa10.94□□□□□ -0.66
Smarcd1-201ENSMUST00000023759 Nbeal2Q6ZQA0 2742 aa10.93□□□□□ -0.66
Smarcd1-201ENSMUST00000023759 Vmo1Q5SXG7 201 aa10.93□□□□□ -0.66
Smarcd1-201ENSMUST00000023759 Ank2Q8C8R3 3898 aa10.93□□□□□ -0.66
Smarcd1-201ENSMUST00000023759 Fxyd5P97808 178 aa10.93□□□□□ -0.66
Smarcd1-201ENSMUST00000023759 MplkipQ9D011 178 aa10.93□□□□□ -0.66
Smarcd1-201ENSMUST00000023759 Leap2Q91V13 76 aa10.92□□□□□ -0.66
Smarcd1-201ENSMUST00000023759 AtrQ9JKK8 2635 aa10.92□□□□□ -0.66
Smarcd1-201ENSMUST00000023759 GfyJ3KML8 504 aa10.92□□□□□ -0.66
Smarcd1-201ENSMUST00000023759 Rpl18aP62717 176 aaKnown RBP10.91□□□□□ -0.66
Smarcd1-201ENSMUST00000023759 CrygaP04345 174 aa10.91□□□□□ -0.66
Smarcd1-201ENSMUST00000023759 Gm10772F7AIG4 85 aa10.91□□□□□ -0.66
Smarcd1-201ENSMUST00000023759 Cox6b1P56391 86 aaKnown RBP10.91□□□□□ -0.66
Smarcd1-201ENSMUST00000023759 4930546C10RikE9Q4Y3 121 aa10.9□□□□□ -0.66
Smarcd1-201ENSMUST00000023759 MifP34884 115 aaKnown RBP10.9□□□□□ -0.66
Smarcd1-201ENSMUST00000023759 4930524J08RikQ9CUJ5 163 aa10.89□□□□□ -0.67
Smarcd1-201ENSMUST00000023759 SnurfQ9WU12 71 aa10.89□□□□□ -0.67
Smarcd1-201ENSMUST00000023759 Igkv1-99F6XWB2 120 aa10.89□□□□□ -0.67
Smarcd1-201ENSMUST00000023759 Wfdc12Q9JHY3 85 aa10.88□□□□□ -0.67
Smarcd1-201ENSMUST00000023759 Ighv1-61P01749 117 aa10.88□□□□□ -0.67
Smarcd1-201ENSMUST00000023759 Igkv2-109A0A075B5K6 120 aa10.87□□□□□ -0.67
Smarcd1-201ENSMUST00000023759 Klk12B2RVZ0 247 aa10.87□□□□□ -0.67
Smarcd1-201ENSMUST00000023759 Defa27F2Z403 93 aa10.87□□□□□ -0.67
Smarcd1-201ENSMUST00000023759 Ly6c2P0CW03 131 aa10.87□□□□□ -0.67
Smarcd1-201ENSMUST00000023759 ApcQ61315 2845 aa10.87□□□□□ -0.67
Smarcd1-201ENSMUST00000023759 Serp2Q6TAW2 65 aa10.87□□□□□ -0.67
Smarcd1-201ENSMUST00000023759 Mrpl52Q9D0Y8 121 aa10.87□□□□□ -0.67
Smarcd1-201ENSMUST00000023759 Mrpl55Q9CZ83 127 aa10.86□□□□□ -0.67
Smarcd1-201ENSMUST00000023759 Krtap16-1A2A5X5 502 aa10.85□□□□□ -0.67
Smarcd1-201ENSMUST00000023759 Defb50Q6TU36 73 aa10.85□□□□□ -0.67
Smarcd1-201ENSMUST00000023759 Gpha2Q925Q5 128 aa10.85□□□□□ -0.67
Smarcd1-201ENSMUST00000023759 Fam19a1Q7TPG8 133 aa10.85□□□□□ -0.67
Smarcd1-201ENSMUST00000023759 Lage3Q9CR70 148 aa10.84□□□□□ -0.67
Smarcd1-201ENSMUST00000023759 Rpl28P41105 137 aaKnown RBP10.84□□□□□ -0.67
Smarcd1-201ENSMUST00000023759 MobpQ9D2P8 170 aa10.83□□□□□ -0.68
Smarcd1-201ENSMUST00000023759 Tmem258P61166 79 aa10.83□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 78.1 ms