RNA–Protein interactions for RNA: ENSMUST00000001547.7

Col1a1-201, Transcript of Collagen alpha-1(I) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col1a1, Length 5,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1-201ENSMUST00000001547 Cd27P41272 250 aa10.26□□□□□ -0.77
Col1a1-201ENSMUST00000001547 Apoc4Q61268 124 aa10.26□□□□□ -0.77
Col1a1-201ENSMUST00000001547 Defb38Q7TNV7 63 aa10.26□□□□□ -0.77
Col1a1-201ENSMUST00000001547 Gm10267M0QWD8 85 aa10.25□□□□□ -0.77
Col1a1-201ENSMUST00000001547 CrygfQ9CXV3 174 aa10.25□□□□□ -0.77
Col1a1-201ENSMUST00000001547 Ube2d1P61080 147 aaKnown RBP10.25□□□□□ -0.77
Col1a1-201ENSMUST00000001547 Cox8cA6H666 72 aa10.25□□□□□ -0.77
Col1a1-201ENSMUST00000001547 Gm9922Q8C3P1 144 aa10.25□□□□□ -0.77
Col1a1-201ENSMUST00000001547 Nupr2Q497P3 102 aa10.24□□□□□ -0.77
Col1a1-201ENSMUST00000001547 Gm4707V9GXN5 68 aa10.24□□□□□ -0.77
Col1a1-201ENSMUST00000001547 SycnQ8VCK7 134 aa10.24□□□□□ -0.77
Col1a1-201ENSMUST00000001547 Gm11011D3Z3L9 86 aa10.24□□□□□ -0.77
Col1a1-201ENSMUST00000001547 Wfdc3Q14AE4 130 aa10.24□□□□□ -0.77
Col1a1-201ENSMUST00000001547 Prrc2aQ7TSC1 2158 aaKnown RBP10.24□□□□□ -0.77
Col1a1-201ENSMUST00000001547 Brwd1Q921C3 2304 aa10.23□□□□□ -0.77
Col1a1-201ENSMUST00000001547 Znf706Q9D115 76 aaKnown RBP10.23□□□□□ -0.77
Col1a1-201ENSMUST00000001547 Gm10509O88255 85 aa10.23□□□□□ -0.77
Col1a1-201ENSMUST00000001547 Flg2Q2VIS4 2362 aa10.23□□□□□ -0.77
Col1a1-201ENSMUST00000001547 A930009A15RikG3UYI6 118 aa10.23□□□□□ -0.77
Col1a1-201ENSMUST00000001547 Col27a1Q5QNQ9 1845 aa10.23□□□□□ -0.77
Col1a1-201ENSMUST00000001547 Smim1P0C8K7 78 aa10.22□□□□□ -0.77
Col1a1-201ENSMUST00000001547 Gm10322F7D7I4 111 aa10.22□□□□□ -0.77
Col1a1-201ENSMUST00000001547 Gm12057A0A087WR21 115 aa10.22□□□□□ -0.77
Col1a1-201ENSMUST00000001547 Ube2d3P61079 147 aa10.21□□□□□ -0.78
Col1a1-201ENSMUST00000001547 Kiaa1549Q68FD9 1940 aa10.21□□□□□ -0.78
Col1a1-201ENSMUST00000001547 Gm19935A0A1B0GSF9 52 aa10.2□□□□□ -0.78
Col1a1-201ENSMUST00000001547 Trbv13-2A0A140T8N6 113 aa10.2□□□□□ -0.78
Col1a1-201ENSMUST00000001547 Ube2d2P62838 147 aa10.2□□□□□ -0.78
Col1a1-201ENSMUST00000001547 Igkv8-28A0A0G2JE47 121 aa10.2□□□□□ -0.78
Col1a1-201ENSMUST00000001547 Pla2g2eQ9QUL3 142 aa10.2□□□□□ -0.78
Col1a1-201ENSMUST00000001547 Prr9Q8BV84 116 aa10.18□□□□□ -0.78
Col1a1-201ENSMUST00000001547 PtprbB2RU80 1998 aa10.18□□□□□ -0.78
Col1a1-201ENSMUST00000001547 1700011M02RikB1AX35 88 aa10.17□□□□□ -0.78
Col1a1-201ENSMUST00000001547 Gm3443F7CCV5 94 aa10.17□□□□□ -0.78
Col1a1-201ENSMUST00000001547 B230217C12RikE9Q3Z1 139 aa10.17□□□□□ -0.78
Col1a1-201ENSMUST00000001547 Cdc42se2Q8BGH7 84 aa10.17□□□□□ -0.78
Col1a1-201ENSMUST00000001547 AcanQ61282 2132 aaKnown RBP10.17□□□□□ -0.78
Col1a1-201ENSMUST00000001547 Gm10577Q3UDV9 132 aa10.16□□□□□ -0.78
Col1a1-201ENSMUST00000001547 Gm21748Q3UE70 102 aa10.16□□□□□ -0.78
Col1a1-201ENSMUST00000001547 P06329 120 aa10.15□□□□□ -0.78
Col1a1-201ENSMUST00000001547 Crip2Q9DCT8 208 aaKnown RBP10.15□□□□□ -0.78
Col1a1-201ENSMUST00000001547 Rpl28P41105 137 aaKnown RBP10.14□□□□□ -0.79
Col1a1-201ENSMUST00000001547 Ifitm6A0A1B0GS75 124 aa10.14□□□□□ -0.79
Col1a1-201ENSMUST00000001547 Krtap27-1E9PX37 202 aa10.14□□□□□ -0.79
Col1a1-201ENSMUST00000001547 CrygeQ03740 174 aa10.14□□□□□ -0.79
Col1a1-201ENSMUST00000001547 CdsnQ7TPC1 561 aa10.14□□□□□ -0.79
Col1a1-201ENSMUST00000001547 C130032M10RikQ8C888 123 aa10.14□□□□□ -0.79
Col1a1-201ENSMUST00000001547 Pla2g1bQ9Z0Y2 146 aa10.14□□□□□ -0.79
Col1a1-201ENSMUST00000001547 Col4a2P08122 1707 aa10.14□□□□□ -0.79
Col1a1-201ENSMUST00000001547 Q9DAB9 146 aa10.13□□□□□ -0.79
Col1a1-201ENSMUST00000001547 Gpha2Q925Q5 128 aa10.13□□□□□ -0.79
Col1a1-201ENSMUST00000001547 Cd164l2Q9D6W7 172 aa10.13□□□□□ -0.79
Col1a1-201ENSMUST00000001547 Gm5464Q3UY29 175 aa10.12□□□□□ -0.79
Col1a1-201ENSMUST00000001547 A830031A19RikQ8BNT5 113 aa10.12□□□□□ -0.79
Col1a1-201ENSMUST00000001547 Piezo2Q8CD54 2822 aa10.12□□□□□ -0.79
Col1a1-201ENSMUST00000001547 Tln1P26039 2541 aaKnown RBP10.12□□□□□ -0.79
Col1a1-201ENSMUST00000001547 D730001G18RikA0A087WQU7 115 aa10.11□□□□□ -0.79
Col1a1-201ENSMUST00000001547 SrarpQ3ULG3 163 aa10.11□□□□□ -0.79
Col1a1-201ENSMUST00000001547 Sprr2jO70561 109 aa10.11□□□□□ -0.79
Col1a1-201ENSMUST00000001547 Rif1Q6PR54 2419 aaKnown RBP10.1□□□□□ -0.79
Col1a1-201ENSMUST00000001547 Wfdc17Q5SSJ1 76 aa10.09□□□□□ -0.79
Col1a1-201ENSMUST00000001547 TeppQ6IMH0 216 aa10.09□□□□□ -0.79
Col1a1-201ENSMUST00000001547 Ighv2-9-1A0A075B697 116 aa10.08□□□□□ -0.8
Col1a1-201ENSMUST00000001547 Rtl10D3YWW5 146 aa10.07□□□□□ -0.8
Col1a1-201ENSMUST00000001547 Myo9aQ8C170 2542 aa10.07□□□□□ -0.8
Col1a1-201ENSMUST00000001547 Bri3P28662 125 aa10.06□□□□□ -0.8
Col1a1-201ENSMUST00000001547 4930524J08RikQ9CUJ5 163 aa10.06□□□□□ -0.8
Col1a1-201ENSMUST00000001547 4930556J24RikQ9D4U7 146 aa10.05□□□□□ -0.8
Col1a1-201ENSMUST00000001547 Shisa2Q8QZV2 295 aa10.04□□□□□ -0.8
Col1a1-201ENSMUST00000001547 SnurfQ9WU12 71 aa10.04□□□□□ -0.8
Col1a1-201ENSMUST00000001547 Gm5142Q8C5X9 133 aa10.04□□□□□ -0.8
Col1a1-201ENSMUST00000001547 BC067074F6RXI4 2391 aa10.04□□□□□ -0.8
Col1a1-201ENSMUST00000001547 Col5a1O88207 1838 aa10.04□□□□□ -0.8
Col1a1-201ENSMUST00000001547 Defb10Q8R2I8 73 aa10.03□□□□□ -0.8
Col1a1-201ENSMUST00000001547 Sptbn4E9PX29 2561 aa10.03□□□□□ -0.8
Col1a1-201ENSMUST00000001547 2310009B15RikA0A0A6YWI4 143 aa10.02□□□□□ -0.8
Col1a1-201ENSMUST00000001547 Bean1Q9EQG5 255 aa10.02□□□□□ -0.81
Col1a1-201ENSMUST00000001547 TroQ6DIC6 2087 aa10.02□□□□□ -0.81
Col1a1-201ENSMUST00000001547 Igkv8-19A0A0G2JFN8 121 aa10.01□□□□□ -0.81
Col1a1-201ENSMUST00000001547 UqcrqQ9CQ69 82 aa10.01□□□□□ -0.81
Col1a1-201ENSMUST00000001547 C2cd3Q52KB6 2323 aa10.01□□□□□ -0.81
Col1a1-201ENSMUST00000001547 Lrrk2Q5S006 2527 aa10.01□□□□□ -0.81
Col1a1-201ENSMUST00000001547 Adm2Q7TNK8 150 aa10.01□□□□□ -0.81
Col1a1-201ENSMUST00000001547 Gm10570F6VB42 170 aa9.99□□□□□ -0.81
Col1a1-201ENSMUST00000001547 Ighv8-13A0A075B5Y0 101 aa9.99□□□□□ -0.81
Col1a1-201ENSMUST00000001547 Gm10300Q8C8P7 189 aa9.99□□□□□ -0.81
Col1a1-201ENSMUST00000001547 Znf580Q9DB38 172 aa9.98□□□□□ -0.81
Col1a1-201ENSMUST00000001547 Pkd1l2Q7TN88 2461 aa9.98□□□□□ -0.81
Col1a1-201ENSMUST00000001547 1600014C23RikQ9DAX4 101 aa9.98□□□□□ -0.81
Col1a1-201ENSMUST00000001547 Arhgap32Q811P8 2089 aa9.98□□□□□ -0.81
Col1a1-201ENSMUST00000001547 Gm10845Q3UNY9 185 aa9.98□□□□□ -0.81
Col1a1-201ENSMUST00000001547 4930432M17RikQ3V0W9 174 aa9.98□□□□□ -0.81
Col1a1-201ENSMUST00000001547 Crip3Q6Q6R3 243 aa9.97□□□□□ -0.81
Col1a1-201ENSMUST00000001547 Abca2P41234 2434 aa9.96□□□□□ -0.81
Col1a1-201ENSMUST00000001547 4930519P11RikQ9CUJ8 166 aa9.96□□□□□ -0.82
Col1a1-201ENSMUST00000001547 Ankhd1E9PUR0 2548 aaKnown RBP9.95□□□□□ -0.82
Col1a1-201ENSMUST00000001547 Ighv1-56A0A0A6YXG2 117 aa9.95□□□□□ -0.82
Col1a1-201ENSMUST00000001547 Srsf12Q8C8K3 266 aa9.95□□□□□ -0.82
Col1a1-201ENSMUST00000001547 Chd8Q09XV5 2582 aaKnown RBP9.95□□□□□ -0.82
Col1a1-201ENSMUST00000001547 BC025920Q3US60 128 aa9.94□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 80.4 ms