RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Akap9Q70FJ1 3797 aa9.09□□□□□ -0.95
Pcdh1-202ENSMUST00000159405 Trav9d-4A0A0G2JG37 103 aa9.08□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Gm7257D3YX25 99 aa9.08□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Ube2e2Q91W82 201 aa9.08□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Ighv1-85A0A075B5Y6 117 aa9.08□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Trav6-4A0A075B6B4 115 aa9.08□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 9130230L23RikQ8CC80 163 aa9.08□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Q9CX25 107 aa9.08□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 MplkipQ9D011 178 aa9.08□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Muc2Q80Z19 2680 aa9.08□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Gm19935A0A1B0GSF9 52 aa9.07□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Gm10553J3QPF1 123 aa9.07□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 DspE9Q557 2883 aaKnown RBP9.07□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Gm10542F6XDR3 90 aa9.07□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Cops9Q3U898 57 aa9.07□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Ighv1-50A0A075B5W1 117 aa9.07□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Ighv5-8A0A075B676 92 aa9.07□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Ighv3-3A0A0A6YWL2 116 aa9.07□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Igkv4-57A0A0A6YYE7 117 aa9.07□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Ighv1-66A0A075B5X5 117 aa9.06□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Gm9887F6RFI0 207 aa9.06□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Ndufa12Q7TMF3 145 aaKnown RBP9.06□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Psmb11Q8BG41 302 aa9.06□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Socs3O35718 225 aa9.06□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Ifitm1Q9D103 106 aa9.06□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Snrpd3P62320 126 aaKnown RBP9.05□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Timm17bQ9Z0V7 172 aa9.05□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 NbeaQ9EPN1 2936 aa9.05□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Ighv1-12A0A0A6YXJ9 117 aa9.05□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Pglyrp1O88593 182 aa9.05□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Ighv1-72P01751 139 aa9.05□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Mob4Q6PEB6 225 aa9.05□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Ighv1-58A0A075B5W9 117 aa9.05□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Ighv1-64A0A075B5X3 117 aa9.05□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Gm21994F6T2D2 329 aa9.05□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 1700010B08RikQ9DAI7 102 aa9.05□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Smg1Q8BKX6 3658 aaKnown RBP9.05□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Trbv16A0A0B4J1H3 115 aa9.05□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 BikO70337 150 aa9.05□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 9430015G10RikA2ASP7 199 aa9.04□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Spink1P09036 80 aa9.04□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Gm9913Q8BQQ2 135 aa9.04□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Znf580Q9DB38 172 aa9.04□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Defa28D3Z1V9 94 aa9.04□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 FlnaQ8BTM8 2647 aaKnown RBP9.04□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Gm16381A0A1Y7VKT9 73 aa9.04□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 P01753 117 aa9.04□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 SnurfQ9WU12 71 aa9.04□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Trdv5A0A075B661 115 aa9.03□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 P01823 113 aa9.03□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 P06329 120 aa9.03□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Trbv30A0A0B4J1P1 111 aa9.03□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Gm10337F7DEP7 55 aa9.03□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Rpl35aO55142 110 aa9.03□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Ighv13-2A0A0A6YWN3 119 aa9.03□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Cxcl14Q9WUQ5 99 aa9.03□□□□□ -0.96
Pcdh1-202ENSMUST00000159405 Ighv2-6-8A0A0A6YWY9 116 aa9.02□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 Tmem254aP0DN89 123 aa9.02□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 Tmem254bP0DN90 123 aa9.02□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 Tmem254cP0DN91 123 aa9.02□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 Rpl36aP83882 106 aaKnown RBP9.02□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 Ccl21aP84444 133 aa9.02□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 Ccl21bP86792 133 aa9.02□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 Ccl21cP86793 133 aa9.02□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 Gm9747Q810H1 104 aa9.01□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 Chd6A3KFM7 2711 aa9.01□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 Trav13n-2A0A0G2JF93 110 aa9.01□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 Ankrd17Q99NH0 2603 aaKnown RBP9□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 Ighv3-1A0A075B5S6 116 aa9□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 4930524J08RikQ9CUJ5 163 aa9□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 Rbm3O89086 153 aaKnown RBP9□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 Fam110dQ80X91 271 aa9□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 EnhoQ8K1D8 76 aa9□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 3110070M22RikQ9DAQ7 118 aa9□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 H2al1aQ5M8Q2 105 aa8.99□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 Sostdc1Q9CQN4 206 aa8.99□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 Lage3Q9CR70 148 aa8.99□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 Pet100P0DJE0 76 aa8.98□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 CrygeQ03740 174 aa8.98□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 Q9DAB9 146 aa8.98□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 Ighv1-11A0A0A6YWI9 117 aa8.97□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 Igkv4-53A0A0G2JFC6 119 aa8.97□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 1700011M02RikB1AX35 88 aa8.97□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 Fam19a1Q7TPG8 133 aa8.97□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 4930564D02RikQ9D4S4 103 aa8.97□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 Usmg5Q78IK2 58 aa8.97□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 Fgf23Q9EPC2 251 aa8.97□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 Cystm1Q8K353 104 aa8.96□□□□□ -0.97
Pcdh1-202ENSMUST00000159405 Ighv5-9-1A0A0A6YVS4 126 aa8.96□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Rpl28P41105 137 aaKnown RBP8.96□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Acyp1P56376 99 aa8.96□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Cox6b1P56391 86 aaKnown RBP8.96□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Gm10647E9Q8X0 124 aa8.95□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Tmem223Q9CQE2 199 aaKnown RBP8.95□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 B230359F08RikA0A0B4J1K3 109 aa8.94□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Nsun4C4P6S0 806 aaKnown RBP8.94□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Ubl5Q9EPV8 73 aa8.94□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Ighv1-61P01749 117 aa8.94□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Itpr3P70227 2670 aa8.94□□□□□ -0.98
Pcdh1-202ENSMUST00000159405 Igkv2-109A0A075B5K6 120 aa8.94□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 57.5 ms