RNA–Protein interactions for RNA: ENSMUST00000115345.7

Syn1-202, Transcript of Synapsin-1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Syn1, Length 3,261 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1-202ENSMUST00000115345 Apc2Q9Z1K7 2274 aa10.53□□□□□ -0.72
Syn1-202ENSMUST00000115345 Nsun4C4P6S0 806 aaKnown RBP10.53□□□□□ -0.72
Syn1-202ENSMUST00000115345 Rpl27aP14115 148 aaKnown RBP10.53□□□□□ -0.72
Syn1-202ENSMUST00000115345 Srsf12Q8C8K3 266 aa10.53□□□□□ -0.72
Syn1-202ENSMUST00000115345 Znf580Q9DB38 172 aa10.53□□□□□ -0.72
Syn1-202ENSMUST00000115345 Ighv1-31A0A0A6YWK5 117 aa10.52□□□□□ -0.72
Syn1-202ENSMUST00000115345 Trank1Q8BV79 2999 aa10.52□□□□□ -0.73
Syn1-202ENSMUST00000115345 Fam19a3Q7TPG6 132 aa10.52□□□□□ -0.73
Syn1-202ENSMUST00000115345 Igkv1-35A0A0G2JDE5 120 aa10.52□□□□□ -0.73
Syn1-202ENSMUST00000115345 Defb33Q30KN3 62 aa10.52□□□□□ -0.73
Syn1-202ENSMUST00000115345 Fam24aQ8CF27 98 aa10.52□□□□□ -0.73
Syn1-202ENSMUST00000115345 Trdv5A0A075B661 115 aa10.51□□□□□ -0.73
Syn1-202ENSMUST00000115345 P01747 120 aa10.51□□□□□ -0.73
Syn1-202ENSMUST00000115345 Ccl3P10855 92 aa10.51□□□□□ -0.73
Syn1-202ENSMUST00000115345 Gm10643Q3URG9 111 aa10.51□□□□□ -0.73
Syn1-202ENSMUST00000115345 Gm10308Q9CVR5 141 aa10.51□□□□□ -0.73
Syn1-202ENSMUST00000115345 Fam208bQ5DTT3 2382 aa10.51□□□□□ -0.73
Syn1-202ENSMUST00000115345 Ighv2-3A0A075B696 115 aa10.5□□□□□ -0.73
Syn1-202ENSMUST00000115345 E130208F15RikQ3UPV3 143 aa10.5□□□□□ -0.73
Syn1-202ENSMUST00000115345 Zfand3Q497H0 227 aa10.5□□□□□ -0.73
Syn1-202ENSMUST00000115345 Cdc42se1Q8BHL7 80 aa10.5□□□□□ -0.73
Syn1-202ENSMUST00000115345 Mrpl33Q9CQP0 65 aa10.5□□□□□ -0.73
Syn1-202ENSMUST00000115345 Ubl5Q9EPV8 73 aa10.49□□□□□ -0.73
Syn1-202ENSMUST00000115345 Polr2kQ63871 58 aa10.48□□□□□ -0.73
Syn1-202ENSMUST00000115345 Igkv4-71A0A0G2JEH0 117 aa10.48□□□□□ -0.73
Syn1-202ENSMUST00000115345 Igkv8-21A0A140T8P7 120 aa10.48□□□□□ -0.73
Syn1-202ENSMUST00000115345 Rif1Q6PR54 2419 aaKnown RBP10.48□□□□□ -0.73
Syn1-202ENSMUST00000115345 Lyzl4Q9D925 145 aa10.48□□□□□ -0.73
Syn1-202ENSMUST00000115345 Zfp36P22893 319 aaKnown RBP10.47□□□□□ -0.73
Syn1-202ENSMUST00000115345 Gm9949Q8C9F4 104 aa10.47□□□□□ -0.73
Syn1-202ENSMUST00000115345 Ube2bP63147 152 aa10.46□□□□□ -0.73
Syn1-202ENSMUST00000115345 Ndufa11Q9D8B4 141 aa10.46□□□□□ -0.73
Syn1-202ENSMUST00000115345 Myo18bE9PV66 2605 aa10.46□□□□□ -0.73
Syn1-202ENSMUST00000115345 1700010B08RikQ9DAI7 102 aa10.46□□□□□ -0.73
Syn1-202ENSMUST00000115345 Gm37988J3QM41 62 aa10.46□□□□□ -0.74
Syn1-202ENSMUST00000115345 Lst1O08843 95 aa10.46□□□□□ -0.74
Syn1-202ENSMUST00000115345 Ly6lH3BJG9 140 aa10.45□□□□□ -0.74
Syn1-202ENSMUST00000115345 Ifitm6A0A1B0GS75 124 aa10.45□□□□□ -0.74
Syn1-202ENSMUST00000115345 Abca12E9Q876 2595 aa10.45□□□□□ -0.74
Syn1-202ENSMUST00000115345 Trbv13-2A0A140T8N6 113 aa10.45□□□□□ -0.74
Syn1-202ENSMUST00000115345 Cep192E9Q4Y4 2514 aaKnown RBP10.44□□□□□ -0.74
Syn1-202ENSMUST00000115345 Fam19a4Q7TPG5 135 aa10.44□□□□□ -0.74
Syn1-202ENSMUST00000115345 Ighv3-6P18531 116 aa10.44□□□□□ -0.74
Syn1-202ENSMUST00000115345 Sptan1P16546 2472 aaKnown RBP10.43□□□□□ -0.74
Syn1-202ENSMUST00000115345 Igkv5-37A0A140T8N4 115 aa10.43□□□□□ -0.74
Syn1-202ENSMUST00000115345 Igkv6-14A0A140T8P1 115 aa10.43□□□□□ -0.74
Syn1-202ENSMUST00000115345 2310034G01RikA0A286YDL3 209 aa10.43□□□□□ -0.74
Syn1-202ENSMUST00000115345 1810062G17RikG3X8Y2 129 aa10.43□□□□□ -0.74
Syn1-202ENSMUST00000115345 Trav13d-1A0A075B606 110 aa10.43□□□□□ -0.74
Syn1-202ENSMUST00000115345 Trav13-4-dv7A0A075B6C2 110 aa10.43□□□□□ -0.74
Syn1-202ENSMUST00000115345 Trav13d-4A0A0G2JFX3 110 aa10.43□□□□□ -0.74
Syn1-202ENSMUST00000115345 Ang2Q64438 145 aa10.43□□□□□ -0.74
Syn1-202ENSMUST00000115345 Ormdl1Q921I0 153 aa10.43□□□□□ -0.74
Syn1-202ENSMUST00000115345 Igkv4-81A0A0G2JEY5 119 aa10.42□□□□□ -0.74
Syn1-202ENSMUST00000115345 Krtap27-1E9PX37 202 aa10.42□□□□□ -0.74
Syn1-202ENSMUST00000115345 A830005F24RikQ8BRT5 167 aa10.42□□□□□ -0.74
Syn1-202ENSMUST00000115345 Ighv1-80A0A075B5Y3 117 aa10.42□□□□□ -0.74
Syn1-202ENSMUST00000115345 Ighv1-12A0A0A6YXJ9 117 aa10.42□□□□□ -0.74
Syn1-202ENSMUST00000115345 Igkv1-110A0A0B4J1I0 119 aa10.42□□□□□ -0.74
Syn1-202ENSMUST00000115345 Q08AU9 97 aa10.41□□□□□ -0.74
Syn1-202ENSMUST00000115345 Gm5941Q497P9 117 aa10.41□□□□□ -0.74
Syn1-202ENSMUST00000115345 Sostdc1Q9CQN4 206 aa10.41□□□□□ -0.74
Syn1-202ENSMUST00000115345 LystP97412 3788 aa10.41□□□□□ -0.74
Syn1-202ENSMUST00000115345 Gm16381A0A1Y7VKT9 73 aa10.41□□□□□ -0.74
Syn1-202ENSMUST00000115345 Ighv1-72P01751 139 aa10.41□□□□□ -0.74
Syn1-202ENSMUST00000115345 Cep250Q60952 2414 aa10.41□□□□□ -0.74
Syn1-202ENSMUST00000115345 Vmo1Q5SXG7 201 aa10.41□□□□□ -0.74
Syn1-202ENSMUST00000115345 Defb29Q8BGW9 78 aa10.4□□□□□ -0.74
Syn1-202ENSMUST00000115345 Rpl11Q9CXW4 178 aaKnown RBP10.4□□□□□ -0.74
Syn1-202ENSMUST00000115345 Cspg4Q8VHY0 2327 aa10.4□□□□□ -0.74
Syn1-202ENSMUST00000115345 Igkv4-53A0A0G2JFC6 119 aa10.4□□□□□ -0.74
Syn1-202ENSMUST00000115345 P06320 134 aa10.4□□□□□ -0.74
Syn1-202ENSMUST00000115345 SonQ9QX47 2444 aaKnown RBP10.4□□□□□ -0.74
Syn1-202ENSMUST00000115345 Dmbt1Q60997 2085 aa10.39□□□□□ -0.75
Syn1-202ENSMUST00000115345 Ighv2-6-8A0A0A6YWY9 116 aa10.39□□□□□ -0.75
Syn1-202ENSMUST00000115345 Q9DAA7 145 aa10.39□□□□□ -0.75
Syn1-202ENSMUST00000115345 C2cd3Q52KB6 2323 aa10.39□□□□□ -0.75
Syn1-202ENSMUST00000115345 Fam216bQ8CC14 138 aa10.39□□□□□ -0.75
Syn1-202ENSMUST00000115345 Igkv20-101-2A0A0G2JDU3 113 aa10.38□□□□□ -0.75
Syn1-202ENSMUST00000115345 Gm17660B9UIU9 90 aa10.38□□□□□ -0.75
Syn1-202ENSMUST00000115345 Fxyd3Q61835 88 aa10.38□□□□□ -0.75
Syn1-202ENSMUST00000115345 Spink12Q9D256 87 aa10.38□□□□□ -0.75
Syn1-202ENSMUST00000115345 P18532 116 aa10.38□□□□□ -0.75
Syn1-202ENSMUST00000115345 Gm9925F6T2U3 160 aa10.38□□□□□ -0.75
Syn1-202ENSMUST00000115345 Unc79Q0KK59 2596 aa10.37□□□□□ -0.75
Syn1-202ENSMUST00000115345 Igkv3-3A0A140T8Q0 119 aa10.36□□□□□ -0.75
Syn1-202ENSMUST00000115345 Ash1lQ99MY8 2958 aa10.36□□□□□ -0.75
Syn1-202ENSMUST00000115345 Fgf23Q9EPC2 251 aa10.36□□□□□ -0.75
Syn1-202ENSMUST00000115345 Phf5aP83870 110 aaKnown RBP10.36□□□□□ -0.75
Syn1-202ENSMUST00000115345 EpopQ7TNS8 369 aa10.36□□□□□ -0.75
Syn1-202ENSMUST00000115345 Ighv3-8A0A075B5T0 131 aa10.35□□□□□ -0.75
Syn1-202ENSMUST00000115345 Gm10549Q3URY4 149 aa10.35□□□□□ -0.75
Syn1-202ENSMUST00000115345 Smg1Q8BKX6 3658 aaKnown RBP10.35□□□□□ -0.75
Syn1-202ENSMUST00000115345 Gm9747Q810H1 104 aa10.35□□□□□ -0.75
Syn1-202ENSMUST00000115345 Atox1O08997 68 aaKnown RBP10.34□□□□□ -0.75
Syn1-202ENSMUST00000115345 3110070M22RikQ9DAQ7 118 aa10.34□□□□□ -0.75
Syn1-202ENSMUST00000115345 4930546C10RikE9Q4Y3 121 aa10.34□□□□□ -0.75
Syn1-202ENSMUST00000115345 Rnf5O35445 180 aa10.34□□□□□ -0.75
Syn1-202ENSMUST00000115345 Chd6A3KFM7 2711 aa10.32□□□□□ -0.76
Syn1-202ENSMUST00000115345 Rpl36aP83882 106 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 55.2 ms