RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Cox7a1P56392 80 aa15.83■□□□□ 0.13
Scn1b-201ENSMUST00000098548 Ube2d1P61080 147 aaKnown RBP15.83■□□□□ 0.13
Scn1b-201ENSMUST00000098548 Atp5g1Q9CR84 136 aa15.83■□□□□ 0.13
Scn1b-201ENSMUST00000098548 Huwe1Q7TMY8 4377 aaKnown RBP15.83■□□□□ 0.13
Scn1b-201ENSMUST00000098548 Trav8-1A0A075B641 109 aa15.83■□□□□ 0.12
Scn1b-201ENSMUST00000098548 Gm9508A0A1W2P7W0 230 aa15.83■□□□□ 0.12
Scn1b-201ENSMUST00000098548 Esp4A8R0T8 117 aa15.83■□□□□ 0.12
Scn1b-201ENSMUST00000098548 Smim1P0C8K7 78 aa15.83■□□□□ 0.12
Scn1b-201ENSMUST00000098548 FasnP19096 2504 aaKnown RBP15.82■□□□□ 0.12
Scn1b-201ENSMUST00000098548 NpwA0A1L1STR8 176 aa15.82■□□□□ 0.12
Scn1b-201ENSMUST00000098548 Gm7257D3YX25 99 aa15.82■□□□□ 0.12
Scn1b-201ENSMUST00000098548 Dmrt3Q80WT2 476 aa15.82■□□□□ 0.12
Scn1b-201ENSMUST00000098548 Prelid3aQ8VE85 172 aa15.82■□□□□ 0.12
Scn1b-201ENSMUST00000098548 4930442H23RikQ9D5G7 103 aa15.82■□□□□ 0.12
Scn1b-201ENSMUST00000098548 Igkv4-54A0A0G2JES9 117 aa15.81■□□□□ 0.12
Scn1b-201ENSMUST00000098548 Cfap126Q6P8X9 189 aa15.81■□□□□ 0.12
Scn1b-201ENSMUST00000098548 Klk5Q9D140 293 aa15.81■□□□□ 0.12
Scn1b-201ENSMUST00000098548 Cdc42se2Q8BGH7 84 aa15.8■□□□□ 0.12
Scn1b-201ENSMUST00000098548 Csmd3Q80T79 3707 aa15.8■□□□□ 0.12
Scn1b-201ENSMUST00000098548 P01729 129 aa15.79■□□□□ 0.12
Scn1b-201ENSMUST00000098548 Plac8l1Q08EJ0 177 aa15.79■□□□□ 0.12
Scn1b-201ENSMUST00000098548 Gm10772F7AIG4 85 aa15.78■□□□□ 0.12
Scn1b-201ENSMUST00000098548 Spink1P09036 80 aa15.78■□□□□ 0.12
Scn1b-201ENSMUST00000098548 Vmo1Q5SXG7 201 aa15.78■□□□□ 0.12
Scn1b-201ENSMUST00000098548 P01811 117 aa15.77■□□□□ 0.11
Scn1b-201ENSMUST00000098548 Gm45753A0A1C7CYU8 86 aa15.76■□□□□ 0.11
Scn1b-201ENSMUST00000098548 Esp24A8R0V6 68 aa15.76■□□□□ 0.11
Scn1b-201ENSMUST00000098548 Smr3aQ61900 147 aa15.75■□□□□ 0.11
Scn1b-201ENSMUST00000098548 Atp6v0e2Q91XE7 81 aa15.75■□□□□ 0.11
Scn1b-201ENSMUST00000098548 Trav4-3A0A0B4J1K1 110 aa15.74■□□□□ 0.11
Scn1b-201ENSMUST00000098548 Trav13n-1A0A0G2JEU8 110 aa15.74■□□□□ 0.11
Scn1b-201ENSMUST00000098548 Gm42674D3YUT9 64 aa15.73■□□□□ 0.11
Scn1b-201ENSMUST00000098548 PrcdQ00LT2 53 aa15.73■□□□□ 0.11
Scn1b-201ENSMUST00000098548 Gm904Q3V2L5 102 aa15.73■□□□□ 0.11
Scn1b-201ENSMUST00000098548 9430069I07RikQ9CX21 111 aa15.73■□□□□ 0.11
Scn1b-201ENSMUST00000098548 Igkv4-79A0A075B5L8 119 aa15.72■□□□□ 0.11
Scn1b-201ENSMUST00000098548 Gm29289A0A087WPY7 166 aa15.72■□□□□ 0.11
Scn1b-201ENSMUST00000098548 Gm4064A0A087WR82 380 aa15.72■□□□□ 0.11
Scn1b-201ENSMUST00000098548 Tmem238A9JSM3 176 aa15.72■□□□□ 0.11
Scn1b-201ENSMUST00000098548 Gm10352B2RWR6 380 aa15.72■□□□□ 0.11
Scn1b-201ENSMUST00000098548 BC107364E9Q5A2 140 aa15.72■□□□□ 0.11
Scn1b-201ENSMUST00000098548 Rbmy1a1O35698 380 aa15.72■□□□□ 0.11
Scn1b-201ENSMUST00000098548 G0s2Q61585 103 aa15.72■□□□□ 0.11
Scn1b-201ENSMUST00000098548 Bud31Q6PGH1 103 aa15.72■□□□□ 0.11
Scn1b-201ENSMUST00000098548 Dnah17Q69Z23 4481 aa15.72■□□□□ 0.11
Scn1b-201ENSMUST00000098548 Defa9P50707 93 aa15.71■□□□□ 0.11
Scn1b-201ENSMUST00000098548 Gm44965A0A0N4SVR3 59 aa15.7■□□□□ 0.1
Scn1b-201ENSMUST00000098548 SrarpQ3ULG3 163 aa15.7■□□□□ 0.1
Scn1b-201ENSMUST00000098548 Ss18l2Q9D174 77 aa15.7■□□□□ 0.1
Scn1b-201ENSMUST00000098548 4930546C10RikE9Q4Y3 121 aa15.7■□□□□ 0.1
Scn1b-201ENSMUST00000098548 Defb45Q3V490 66 aa15.69■□□□□ 0.1
Scn1b-201ENSMUST00000098548 Gm9242J3QNY1 357 aa15.68■□□□□ 0.1
Scn1b-201ENSMUST00000098548 Tm2d2Q8R0I4 213 aa15.66■□□□□ 0.1
Scn1b-201ENSMUST00000098548 Tmem223Q9CQE2 199 aaKnown RBP15.66■□□□□ 0.1
Scn1b-201ENSMUST00000098548 Tomm7Q9D173 55 aa15.66■□□□□ 0.1
Scn1b-201ENSMUST00000098548 MobpQ9D2P8 170 aa15.66■□□□□ 0.1
Scn1b-201ENSMUST00000098548 Gm6793B2RXM2 351 aa15.66■□□□□ 0.1
Scn1b-201ENSMUST00000098548 Gm9513B3GLJ6 99 aa15.66■□□□□ 0.1
Scn1b-201ENSMUST00000098548 Cox7cP17665 63 aa15.66■□□□□ 0.1
Scn1b-201ENSMUST00000098548 Odf3l2Q3TZ65 277 aa15.66■□□□□ 0.1
Scn1b-201ENSMUST00000098548 Mfap4Q9D1H9 257 aa15.66■□□□□ 0.1
Scn1b-201ENSMUST00000098548 Tcf24V9GWT9 166 aa15.66■□□□□ 0.1
Scn1b-201ENSMUST00000098548 Zfp951A0A087WRH0 451 aa15.65■□□□□ 0.1
Scn1b-201ENSMUST00000098548 Tfpi2O35536 230 aa15.65■□□□□ 0.1
Scn1b-201ENSMUST00000098548 Bsph2Q0Q236 131 aa15.65■□□□□ 0.1
Scn1b-201ENSMUST00000098548 Gemin7Q9CWY4 129 aa15.65■□□□□ 0.1
Scn1b-201ENSMUST00000098548 Igkv4-53A0A0G2JFC6 119 aa15.64■□□□□ 0.09
Scn1b-201ENSMUST00000098548 Gm6812B1AXU1 112 aa15.64■□□□□ 0.09
Scn1b-201ENSMUST00000098548 Sh2d1aO88890 126 aa15.64■□□□□ 0.09
Scn1b-201ENSMUST00000098548 Rbmy1bQ60990 380 aa15.64■□□□□ 0.09
Scn1b-201ENSMUST00000098548 Ighv8-13A0A075B5Y0 101 aa15.63■□□□□ 0.09
Scn1b-201ENSMUST00000098548 CirbpP60824 172 aaKnown RBP15.63■□□□□ 0.09
Scn1b-201ENSMUST00000098548 TirapQ99JY1 241 aa15.63■□□□□ 0.09
Scn1b-201ENSMUST00000098548 Ube2v1Q9CZY3 147 aa15.63■□□□□ 0.09
Scn1b-201ENSMUST00000098548 Triap1Q9D8Z2 76 aa15.63■□□□□ 0.09
Scn1b-201ENSMUST00000098548 Gm16181B0V2H2 73 aa15.62■□□□□ 0.09
Scn1b-201ENSMUST00000098548 Lect2O88803 151 aa15.62■□□□□ 0.09
Scn1b-201ENSMUST00000098548 Rpl24Q8BP67 157 aaKnown RBP15.62■□□□□ 0.09
Scn1b-201ENSMUST00000098548 Tac4Q99N14 128 aa15.62■□□□□ 0.09
Scn1b-201ENSMUST00000098548 Trav4d-3A0A075B625 110 aa15.62■□□□□ 0.09
Scn1b-201ENSMUST00000098548 Trbv13-2A0A140T8N6 113 aa15.62■□□□□ 0.09
Scn1b-201ENSMUST00000098548 Gm10542F6XDR3 90 aa15.62■□□□□ 0.09
Scn1b-201ENSMUST00000098548 Srsf9Q9D0B0 222 aaKnown RBP15.62■□□□□ 0.09
Scn1b-201ENSMUST00000098548 Zc2hc1bQ9D534 172 aa15.62■□□□□ 0.09
Scn1b-201ENSMUST00000098548 Ighv8-5A0A0A6YY60 119 aa15.61■□□□□ 0.09
Scn1b-201ENSMUST00000098548 Gm35549A0A0N4SUS7 141 aa15.61■□□□□ 0.09
Scn1b-201ENSMUST00000098548 Cops9Q3U898 57 aa15.61■□□□□ 0.09
Scn1b-201ENSMUST00000098548 Wfdc21Q8BTE6 63 aa15.61■□□□□ 0.09
Scn1b-201ENSMUST00000098548 Gm17509Q9CZ61 145 aa15.61■□□□□ 0.09
Scn1b-201ENSMUST00000098548 Krtap10-10A0A1W2P7T6 217 aa15.6■□□□□ 0.09
Scn1b-201ENSMUST00000098548 Igkv1-99F6XWB2 120 aa15.6■□□□□ 0.09
Scn1b-201ENSMUST00000098548 Ighv1-61P01749 117 aa15.6■□□□□ 0.09
Scn1b-201ENSMUST00000098548 Igkv3-9A0A140T8P4 119 aa15.59■□□□□ 0.09
Scn1b-201ENSMUST00000098548 Gm9507D3Z5T3 223 aa15.59■□□□□ 0.09
Scn1b-201ENSMUST00000098548 Gm10647E9Q8X0 124 aa15.59■□□□□ 0.09
Scn1b-201ENSMUST00000098548 Rbx1P62878 108 aa15.59■□□□□ 0.09
Scn1b-201ENSMUST00000098548 Timm17bQ9Z0V7 172 aa15.59■□□□□ 0.09
Scn1b-201ENSMUST00000098548 Ighv1-62-1A0A075B5U3 116 aa15.58■□□□□ 0.09
Scn1b-201ENSMUST00000098548 Dync2h1Q45VK7 4306 aa15.57■□□□□ 0.08
Scn1b-201ENSMUST00000098548 Iglc1A0A0G2JE99 106 aa15.56■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 112.5 ms