RNA–Protein interactions for RNA: ENSMUST00000063303.10

Cdkl3-201, Transcript of Cyclin-dependent kinase-like 3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Cdkl3, Length 2,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3-201ENSMUST00000063303 Igkv4-79A0A075B5L8 119 aa10.7□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 Gm9922Q8C3P1 144 aa10.7□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 Morn3Q8C5T4 241 aa10.7□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 Cox6cQ9CPQ1 76 aa10.7□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 Sostdc1Q9CQN4 206 aa10.7□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 4930544G11RikQ9CR99 193 aa10.7□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 Trbv30A0A0B4J1P1 111 aa10.69□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 Gm26661M0QWV4 156 aa10.69□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 Pglyrp4Q0VB07 374 aa10.69□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 Foxc1Q61572 553 aa10.69□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 Trav3-4A0A075B654 114 aa10.69□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 Smim10l1A0A087WNQ7 89 aa10.69□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 Fam110dQ80X91 271 aa10.69□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 Eif4ebp1Q60876 117 aa10.68□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 Ucn2Q99ML8 113 aa10.68□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 Cep192E9Q4Y4 2514 aaKnown RBP10.68□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 Myo18bE9PV66 2605 aa10.68□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 Gm7257D3YX25 99 aa10.68□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 Mapk1ip1lQ8BH93 242 aa10.68□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 Gm5089A1L3C8 106 aa10.67□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 Xlr5cQ9JJR2 179 aa10.67□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 Psmb8P28063 276 aa10.67□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 TeppQ6IMH0 216 aa10.67□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 Trav9d-4A0A0G2JG37 103 aa10.66□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 PkigO70139 76 aa10.66□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 Esm1Q9QYY7 184 aa10.66□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 Mast4Q811L6 2618 aa10.66□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 PrlhG3UWC3 86 aa10.65□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 CirbpP60824 172 aaKnown RBP10.65□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 Fgfbp3Q1HCM0 245 aa10.65□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 Tenm3Q9WTS6 2715 aa10.65□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 Trav13-4-dv7A0A075B6C2 110 aa10.65□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 Cox17P56394 63 aa10.65□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 NipblQ6KCD5 2798 aaKnown RBP10.65□□□□□ -0.7
Cdkl3-201ENSMUST00000063303 Smim20D3Z7Q2 69 aa10.65□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Usp9yF8VPU6 2556 aa10.64□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Gm3443F7CCV5 94 aa10.64□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 P01745 121 aa10.64□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Gm10300Q8C8P7 189 aa10.64□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Pfn2Q9JJV2 140 aa10.64□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Epg5Q80TA9 2572 aa10.63□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Trav9d-3A0A075B695 113 aa10.63□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 SelenowP63300 88 aa10.63□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Defb2P82020 71 aa10.63□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Ighv1-62-1A0A075B5U3 116 aa10.63□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Sh2d1aO88890 126 aa10.63□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Defa16P50714 93 aa10.63□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 4930442H23RikQ9D5G7 103 aa10.63□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Timm17bQ9Z0V7 172 aa10.63□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 C2cd3Q52KB6 2323 aa10.62□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Trav4d-3A0A075B625 110 aa10.62□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 1700011M02RikB1AX35 88 aa10.62□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Gm904Q3V2L5 102 aa10.62□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Gm10735Q3US96 136 aa10.61□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Nop10Q9CQS2 64 aa10.61□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Zfp462B1AWL2 2495 aaKnown RBP10.61□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Gm28539A0A087WSL9 92 aa10.61□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Lst1O08843 95 aa10.61□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 1700010B08RikQ9DAI7 102 aa10.61□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Crlf1Q9JM58 425 aa10.61□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Trav14d-3-dv8A0A075B619 120 aa10.6□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Trav4-3A0A0B4J1K1 110 aa10.6□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Ss18l2Q9D174 77 aa10.6□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Hivep3A2A884 2348 aa10.6□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Igkv1-35A0A0G2JDE5 120 aa10.6□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Gatd1Q8BFQ8 220 aa10.6□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Defb29Q8BGW9 78 aa10.6□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Hspg2Q05793 3707 aaKnown RBP10.6□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Bles03Q8VD62 251 aa10.6□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Tmem213Q08EA8 116 aa10.59□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Srsf12Q8C8K3 266 aa10.59□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Gm17472A0A075B683 117 aa10.59□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Gm10647E9Q8X0 124 aa10.59□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Defb26Q30KN7 186 aa10.59□□□□□ -0.71
Cdkl3-201ENSMUST00000063303 Akap13E9Q394 2776 aa10.58□□□□□ -0.72
Cdkl3-201ENSMUST00000063303 B230359F08RikA0A0B4J1K3 109 aa10.58□□□□□ -0.72
Cdkl3-201ENSMUST00000063303 Rpl36aP83882 106 aaKnown RBP10.58□□□□□ -0.72
Cdkl3-201ENSMUST00000063303 Plac8l1Q08EJ0 177 aa10.58□□□□□ -0.72
Cdkl3-201ENSMUST00000063303 Q99M08 65 aa10.57□□□□□ -0.72
Cdkl3-201ENSMUST00000063303 Cd164l2Q9D6W7 172 aa10.57□□□□□ -0.72
Cdkl3-201ENSMUST00000063303 Setd2E9Q5F9 2537 aa10.57□□□□□ -0.72
Cdkl3-201ENSMUST00000063303 Tfpi2O35536 230 aa10.57□□□□□ -0.72
Cdkl3-201ENSMUST00000063303 Defa2P28309 93 aa10.57□□□□□ -0.72
Cdkl3-201ENSMUST00000063303 Trav11A0A0B4J1J9 114 aa10.56□□□□□ -0.72
Cdkl3-201ENSMUST00000063303 Gm7075D3Z497 112 aa10.56□□□□□ -0.72
Cdkl3-201ENSMUST00000063303 ColqO35348 457 aa10.56□□□□□ -0.72
Cdkl3-201ENSMUST00000063303 Rpl35aO55142 110 aa10.56□□□□□ -0.72
Cdkl3-201ENSMUST00000063303 Cdc42se2Q8BGH7 84 aa10.56□□□□□ -0.72
Cdkl3-201ENSMUST00000063303 Cox7a1P56392 80 aa10.56□□□□□ -0.72
Cdkl3-201ENSMUST00000063303 PemtQ61907 199 aa10.56□□□□□ -0.72
Cdkl3-201ENSMUST00000063303 MalO09198 153 aa10.55□□□□□ -0.72
Cdkl3-201ENSMUST00000063303 Ighv1-49A0A0A6YWX2 117 aa10.55□□□□□ -0.72
Cdkl3-201ENSMUST00000063303 5730596B20RikQ8BQ08 205 aa10.55□□□□□ -0.72
Cdkl3-201ENSMUST00000063303 Atp5eP56382 52 aa10.54□□□□□ -0.72
Cdkl3-201ENSMUST00000063303 Ank2Q8C8R3 3898 aa10.54□□□□□ -0.72
Cdkl3-201ENSMUST00000063303 Gm867A0A1W2P7T4 151 aa10.54□□□□□ -0.72
Cdkl3-201ENSMUST00000063303 Prh1P05142 261 aa10.54□□□□□ -0.72
Cdkl3-201ENSMUST00000063303 Trav13d-4A0A0G2JFX3 110 aa10.54□□□□□ -0.72
Cdkl3-201ENSMUST00000063303 Gm8439G3UWA7 96 aa10.54□□□□□ -0.72
Cdkl3-201ENSMUST00000063303 Rnase1P00683 149 aa10.54□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms