RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Tnfrsf23Q9ER63 176 aa13.46□□□□□ -0.26
Scaf11-201ENSMUST00000047835 BC067074F6RXI4 2391 aa13.45□□□□□ -0.26
Scaf11-201ENSMUST00000047835 Col4a2P08122 1707 aa13.45□□□□□ -0.26
Scaf11-201ENSMUST00000047835 Wfdc15aQ8BH89 80 aa13.45□□□□□ -0.26
Scaf11-201ENSMUST00000047835 Fam19a5Q91WE9 132 aa13.45□□□□□ -0.26
Scaf11-201ENSMUST00000047835 Myo9aQ8C170 2542 aa13.45□□□□□ -0.26
Scaf11-201ENSMUST00000047835 Ypel4Q65Z93 127 aa13.45□□□□□ -0.26
Scaf11-201ENSMUST00000047835 Gm9922Q8C3P1 144 aa13.45□□□□□ -0.26
Scaf11-201ENSMUST00000047835 Tax1bp3Q9DBG9 124 aa13.45□□□□□ -0.26
Scaf11-201ENSMUST00000047835 Col27a1Q5QNQ9 1845 aa13.44□□□□□ -0.26
Scaf11-201ENSMUST00000047835 Nupr2Q497P3 102 aa13.44□□□□□ -0.26
Scaf11-201ENSMUST00000047835 Chchd7Q8K2Q5 85 aa13.43□□□□□ -0.26
Scaf11-201ENSMUST00000047835 9430015G10RikA2ASP7 199 aa13.42□□□□□ -0.26
Scaf11-201ENSMUST00000047835 Tfpi2O35536 230 aa13.42□□□□□ -0.26
Scaf11-201ENSMUST00000047835 Igkv3-4A0A140T8Q4 119 aa13.41□□□□□ -0.26
Scaf11-201ENSMUST00000047835 CrygeQ03740 174 aa13.41□□□□□ -0.26
Scaf11-201ENSMUST00000047835 Gm3443F7CCV5 94 aa13.41□□□□□ -0.26
Scaf11-201ENSMUST00000047835 Plac8l1Q08EJ0 177 aa13.41□□□□□ -0.26
Scaf11-201ENSMUST00000047835 AcanQ61282 2132 aaKnown RBP13.41□□□□□ -0.26
Scaf11-201ENSMUST00000047835 Gm17521F6QAC8 156 aa13.41□□□□□ -0.26
Scaf11-201ENSMUST00000047835 BikO70337 150 aa13.4□□□□□ -0.26
Scaf11-201ENSMUST00000047835 Acyp1P56376 99 aa13.4□□□□□ -0.26
Scaf11-201ENSMUST00000047835 Prr9Q8BV84 116 aa13.4□□□□□ -0.26
Scaf11-201ENSMUST00000047835 D730001G18RikA0A087WQU7 115 aa13.39□□□□□ -0.27
Scaf11-201ENSMUST00000047835 Ly6hQ9WUC3 139 aa13.39□□□□□ -0.27
Scaf11-201ENSMUST00000047835 Wfdc12Q9JHY3 85 aa13.39□□□□□ -0.27
Scaf11-201ENSMUST00000047835 Gm10401E9Q3K6 71 aa13.39□□□□□ -0.27
Scaf11-201ENSMUST00000047835 P01755 137 aa13.39□□□□□ -0.27
Scaf11-201ENSMUST00000047835 P01823 113 aa13.38□□□□□ -0.27
Scaf11-201ENSMUST00000047835 Defb12Q8K4N3 78 aa13.38□□□□□ -0.27
Scaf11-201ENSMUST00000047835 4930564D02RikQ9D4S4 103 aa13.38□□□□□ -0.27
Scaf11-201ENSMUST00000047835 Fgf23Q9EPC2 251 aa13.37□□□□□ -0.27
Scaf11-201ENSMUST00000047835 Ighv2-6-8A0A0A6YWY9 116 aa13.37□□□□□ -0.27
Scaf11-201ENSMUST00000047835 Cd164l2Q9D6W7 172 aa13.37□□□□□ -0.27
Scaf11-201ENSMUST00000047835 Gm12353A2AGJ4 60 aa13.37□□□□□ -0.27
Scaf11-201ENSMUST00000047835 PpdpfQ9CR37 115 aa13.37□□□□□ -0.27
Scaf11-201ENSMUST00000047835 Rbm3O89086 153 aaKnown RBP13.36□□□□□ -0.27
Scaf11-201ENSMUST00000047835 Pla2g1bQ9Z0Y2 146 aa13.36□□□□□ -0.27
Scaf11-201ENSMUST00000047835 Polr2kQ63871 58 aa13.35□□□□□ -0.27
Scaf11-201ENSMUST00000047835 P06329 120 aa13.35□□□□□ -0.27
Scaf11-201ENSMUST00000047835 GhrhP16043 103 aa13.35□□□□□ -0.27
Scaf11-201ENSMUST00000047835 Gm10509O88255 85 aa13.35□□□□□ -0.27
Scaf11-201ENSMUST00000047835 B230217C12RikE9Q3Z1 139 aa13.34□□□□□ -0.27
Scaf11-201ENSMUST00000047835 Gpha2Q925Q5 128 aa13.34□□□□□ -0.27
Scaf11-201ENSMUST00000047835 Shisa2Q8QZV2 295 aa13.34□□□□□ -0.27
Scaf11-201ENSMUST00000047835 Ormdl1Q921I0 153 aa13.34□□□□□ -0.27
Scaf11-201ENSMUST00000047835 Trbv13-2A0A140T8N6 113 aa13.34□□□□□ -0.27
Scaf11-201ENSMUST00000047835 Ighv1-62-1A0A075B5U3 116 aa13.33□□□□□ -0.28
Scaf11-201ENSMUST00000047835 Gm5464Q3UY29 175 aa13.33□□□□□ -0.28
Scaf11-201ENSMUST00000047835 B430305J03RikQ8BQQ8 176 aa13.33□□□□□ -0.28
Scaf11-201ENSMUST00000047835 Gm9805F6YK59 57 aa13.33□□□□□ -0.28
Scaf11-201ENSMUST00000047835 Ighv1-61P01749 117 aa13.33□□□□□ -0.28
Scaf11-201ENSMUST00000047835 Ube2d3P61079 147 aa13.32□□□□□ -0.28
Scaf11-201ENSMUST00000047835 Ube2d2P62838 147 aa13.32□□□□□ -0.28
Scaf11-201ENSMUST00000047835 PtprbB2RU80 1998 aa13.32□□□□□ -0.28
Scaf11-201ENSMUST00000047835 9530003J23RikQ8BM26 151 aa13.32□□□□□ -0.28
Scaf11-201ENSMUST00000047835 Obox2E9PXV9 151 aa13.32□□□□□ -0.28
Scaf11-201ENSMUST00000047835 Igkv3-3A0A140T8Q0 119 aa13.31□□□□□ -0.28
Scaf11-201ENSMUST00000047835 SetxA2AKX3 2646 aa13.31□□□□□ -0.28
Scaf11-201ENSMUST00000047835 Gm21748Q3UE70 102 aa13.31□□□□□ -0.28
Scaf11-201ENSMUST00000047835 SycnQ8VCK7 134 aa13.3□□□□□ -0.28
Scaf11-201ENSMUST00000047835 Ankhd1E9PUR0 2548 aaKnown RBP13.3□□□□□ -0.28
Scaf11-201ENSMUST00000047835 Ube2d1P61080 147 aaKnown RBP13.3□□□□□ -0.28
Scaf11-201ENSMUST00000047835 C2cd3Q52KB6 2323 aa13.3□□□□□ -0.28
Scaf11-201ENSMUST00000047835 Ttc28Q80XJ3 2450 aa13.29□□□□□ -0.28
Scaf11-201ENSMUST00000047835 Igkv4-92A0A0B4J1I2 117 aa13.29□□□□□ -0.28
Scaf11-201ENSMUST00000047835 Gm10300Q8C8P7 189 aa13.29□□□□□ -0.28
Scaf11-201ENSMUST00000047835 Ptpn13Q64512 2453 aa13.29□□□□□ -0.28
Scaf11-201ENSMUST00000047835 Q9DAQ5 155 aa13.28□□□□□ -0.28
Scaf11-201ENSMUST00000047835 5730596B20RikQ8BQ08 205 aa13.28□□□□□ -0.28
Scaf11-201ENSMUST00000047835 ScxQ64124 207 aa13.27□□□□□ -0.28
Scaf11-201ENSMUST00000047835 Notch2O35516 2470 aa13.27□□□□□ -0.29
Scaf11-201ENSMUST00000047835 Cox8cA6H666 72 aa13.27□□□□□ -0.29
Scaf11-201ENSMUST00000047835 Cdc42se2Q8BGH7 84 aa13.27□□□□□ -0.29
Scaf11-201ENSMUST00000047835 Naa38Q9D2U5 125 aa13.26□□□□□ -0.29
Scaf11-201ENSMUST00000047835 Ccdc179J3QM76 67 aa13.26□□□□□ -0.29
Scaf11-201ENSMUST00000047835 Ly6g6cQ9Z1Q4 126 aa13.26□□□□□ -0.29
Scaf11-201ENSMUST00000047835 Igkv8-21A0A140T8P7 120 aa13.25□□□□□ -0.29
Scaf11-201ENSMUST00000047835 Vpreb3D3Z6J4 130 aa13.24□□□□□ -0.29
Scaf11-201ENSMUST00000047835 CnfnQ6PCW6 111 aa13.24□□□□□ -0.29
Scaf11-201ENSMUST00000047835 Wfdc10Q3V2J9 124 aa13.24□□□□□ -0.29
Scaf11-201ENSMUST00000047835 Tcl1b3P56842 122 aa13.24□□□□□ -0.29
Scaf11-201ENSMUST00000047835 A830005F24RikQ8BRT5 167 aa13.24□□□□□ -0.29
Scaf11-201ENSMUST00000047835 Ube2d4D3YUH6 135 aa13.24□□□□□ -0.29
Scaf11-201ENSMUST00000047835 Spink8Q09TK9 105 aa13.23□□□□□ -0.29
Scaf11-201ENSMUST00000047835 4930535I16RikQ9CUI2 172 aa13.23□□□□□ -0.29
Scaf11-201ENSMUST00000047835 Mrpl55Q9CZ83 127 aa13.23□□□□□ -0.29
Scaf11-201ENSMUST00000047835 Pde6gP09174 87 aa13.22□□□□□ -0.29
Scaf11-201ENSMUST00000047835 Pla2g2eQ9QUL3 142 aa13.22□□□□□ -0.29
Scaf11-201ENSMUST00000047835 Ighv8-5A0A0A6YY60 119 aa13.22□□□□□ -0.29
Scaf11-201ENSMUST00000047835 Spink4O35679 86 aa13.22□□□□□ -0.29
Scaf11-201ENSMUST00000047835 Timm17bQ9Z0V7 172 aa13.22□□□□□ -0.29
Scaf11-201ENSMUST00000047835 Ighv10-1A0A0B4J1J6 119 aa13.22□□□□□ -0.29
Scaf11-201ENSMUST00000047835 Igkv1-117A0A140T8M0 119 aa13.22□□□□□ -0.29
Scaf11-201ENSMUST00000047835 Hivep2Q3UHF7 2430 aa13.22□□□□□ -0.29
Scaf11-201ENSMUST00000047835 Cox7bP56393 80 aa13.21□□□□□ -0.29
Scaf11-201ENSMUST00000047835 1700011M02RikB1AX35 88 aa13.21□□□□□ -0.29
Scaf11-201ENSMUST00000047835 Gm10322F7D7I4 111 aa13.21□□□□□ -0.3
Scaf11-201ENSMUST00000047835 Prr15lQ8JZM2 100 aa13.21□□□□□ -0.3
Scaf11-201ENSMUST00000047835 Tmem254aP0DN89 123 aa13.2□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 251.4 ms