RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 P01896 185 aa16.23■□□□□ 0.19
Upf3a-201ENSMUST00000043767 Chchd7Q8K2Q5 85 aa16.23■□□□□ 0.19
Upf3a-201ENSMUST00000043767 Klk5Q9D140 293 aa16.23■□□□□ 0.19
Upf3a-201ENSMUST00000043767 P06329 120 aa16.22■□□□□ 0.19
Upf3a-201ENSMUST00000043767 Il1f10Q8R459 152 aa16.22■□□□□ 0.19
Upf3a-201ENSMUST00000043767 Higd1aQ9JLR9 95 aa16.22■□□□□ 0.19
Upf3a-201ENSMUST00000043767 Notch1Q01705 2531 aa16.21■□□□□ 0.19
Upf3a-201ENSMUST00000043767 Cmc4Q61908 68 aa16.21■□□□□ 0.19
Upf3a-201ENSMUST00000043767 Leap2Q91V13 76 aa16.21■□□□□ 0.19
Upf3a-201ENSMUST00000043767 Spata45Q9CVW4 97 aa16.21■□□□□ 0.19
Upf3a-201ENSMUST00000043767 LeprotO89013 131 aa16.2■□□□□ 0.18
Upf3a-201ENSMUST00000043767 HilpdaQ9JLS0 64 aa16.2■□□□□ 0.18
Upf3a-201ENSMUST00000043767 FcorP0DJI6 106 aa16.2■□□□□ 0.18
Upf3a-201ENSMUST00000043767 Gm7257D3YX25 99 aa16.19■□□□□ 0.18
Upf3a-201ENSMUST00000043767 Gm28269A0A087WSG3 125 aa16.18■□□□□ 0.18
Upf3a-201ENSMUST00000043767 Ifitm1Q9D103 106 aa16.18■□□□□ 0.18
Upf3a-201ENSMUST00000043767 Gm10322F7D7I4 111 aa16.18■□□□□ 0.18
Upf3a-201ENSMUST00000043767 Ndufa3Q9CQ91 84 aa16.18■□□□□ 0.18
Upf3a-201ENSMUST00000043767 Dnah14A0A140LIJ4 4489 aa16.17■□□□□ 0.18
Upf3a-201ENSMUST00000043767 Ankrd39Q9D2X0 183 aa16.17■□□□□ 0.18
Upf3a-201ENSMUST00000043767 Cdip1Q9DB75 208 aa16.17■□□□□ 0.18
Upf3a-201ENSMUST00000043767 Cox17P56394 63 aa16.17■□□□□ 0.18
Upf3a-201ENSMUST00000043767 Spry2Q9QXV8 315 aa16.17■□□□□ 0.18
Upf3a-201ENSMUST00000043767 Igkv4-91A0A075B5L2 119 aa16.16■□□□□ 0.18
Upf3a-201ENSMUST00000043767 6430550D23RikE9Q1X6 194 aa16.16■□□□□ 0.18
Upf3a-201ENSMUST00000043767 Atp5lQ9CPQ8 103 aa16.16■□□□□ 0.18
Upf3a-201ENSMUST00000043767 Gm9887F6RFI0 207 aa16.15■□□□□ 0.18
Upf3a-201ENSMUST00000043767 TtrP07309 147 aa16.15■□□□□ 0.18
Upf3a-201ENSMUST00000043767 Cryba4Q9JJV0 196 aa16.15■□□□□ 0.18
Upf3a-201ENSMUST00000043767 Gm45785A0A1B0GT05 94 aa16.15■□□□□ 0.18
Upf3a-201ENSMUST00000043767 Gm28044L7N1X0 119 aa16.15■□□□□ 0.18
Upf3a-201ENSMUST00000043767 Mpv17l2Q8VIK2 200 aa16.15■□□□□ 0.18
Upf3a-201ENSMUST00000043767 NpwA0A1L1STR8 176 aa16.14■□□□□ 0.17
Upf3a-201ENSMUST00000043767 Gm6793B2RXM2 351 aa16.14■□□□□ 0.17
Upf3a-201ENSMUST00000043767 CckP09240 115 aa16.14■□□□□ 0.17
Upf3a-201ENSMUST00000043767 Gpha2Q925Q5 128 aa16.14■□□□□ 0.17
Upf3a-201ENSMUST00000043767 Fgfbp3Q1HCM0 245 aa16.12■□□□□ 0.17
Upf3a-201ENSMUST00000043767 Morn5Q9DAI9 170 aa16.12■□□□□ 0.17
Upf3a-201ENSMUST00000043767 Ighv2-6-8A0A0A6YWY9 116 aa16.12■□□□□ 0.17
Upf3a-201ENSMUST00000043767 Gata1P17679 413 aa16.12■□□□□ 0.17
Upf3a-201ENSMUST00000043767 Rpl13aP19253 203 aaKnown RBP16.12■□□□□ 0.17
Upf3a-201ENSMUST00000043767 Phlda3Q9WV95 125 aa16.11■□□□□ 0.17
Upf3a-201ENSMUST00000043767 C920008G01RikA0A0B4J1N1 112 aa16.1■□□□□ 0.17
Upf3a-201ENSMUST00000043767 Gatd1Q8BFQ8 220 aa16.1■□□□□ 0.17
Upf3a-201ENSMUST00000043767 Igkv4-54A0A0G2JES9 117 aa16.09■□□□□ 0.17
Upf3a-201ENSMUST00000043767 MrapQ9D159 127 aa16.09■□□□□ 0.17
Upf3a-201ENSMUST00000043767 OdaphJ3QNT8 126 aa16.08■□□□□ 0.16
Upf3a-201ENSMUST00000043767 P01745 121 aa16.07■□□□□ 0.16
Upf3a-201ENSMUST00000043767 Rab37Q9JKM7 223 aa16.07■□□□□ 0.16
Upf3a-201ENSMUST00000043767 Trav9d-3A0A075B695 113 aa16.07■□□□□ 0.16
Upf3a-201ENSMUST00000043767 Rpl32-psP17932 135 aa16.07■□□□□ 0.16
Upf3a-201ENSMUST00000043767 Cks1bP61025 79 aa16.07■□□□□ 0.16
Upf3a-201ENSMUST00000043767 Cfap126Q6P8X9 189 aa16.07■□□□□ 0.16
Upf3a-201ENSMUST00000043767 Ifitm10Q8BR26 201 aa16.07■□□□□ 0.16
Upf3a-201ENSMUST00000043767 Higd2aQ9CQJ1 106 aa16.07■□□□□ 0.16
Upf3a-201ENSMUST00000043767 Trav13d-1A0A075B606 110 aa16.06■□□□□ 0.16
Upf3a-201ENSMUST00000043767 Fam19a4Q7TPG5 135 aa16.06■□□□□ 0.16
Upf3a-201ENSMUST00000043767 FcgbpE9Q0B5 2583 aa16.06■□□□□ 0.16
Upf3a-201ENSMUST00000043767 Gm35549A0A0N4SUS7 141 aa16.06■□□□□ 0.16
Upf3a-201ENSMUST00000043767 Lect2O88803 151 aa16.06■□□□□ 0.16
Upf3a-201ENSMUST00000043767 Foxc1Q61572 553 aa16.06■□□□□ 0.16
Upf3a-201ENSMUST00000043767 March3Q8BRX9 218 aa16.06■□□□□ 0.16
Upf3a-201ENSMUST00000043767 3110070M22RikQ9DAQ7 118 aa16.06■□□□□ 0.16
Upf3a-201ENSMUST00000043767 Gm9936Q8C864 160 aa16.05■□□□□ 0.16
Upf3a-201ENSMUST00000043767 BC106179Q8C9L1 186 aa16.04■□□□□ 0.16
Upf3a-201ENSMUST00000043767 P01811 117 aa16.04■□□□□ 0.16
Upf3a-201ENSMUST00000043767 Lgals4Q8K419 326 aa16.04■□□□□ 0.16
Upf3a-201ENSMUST00000043767 Mfap4Q9D1H9 257 aa16.04■□□□□ 0.16
Upf3a-201ENSMUST00000043767 4930442H23RikQ9D5G7 103 aa16.04■□□□□ 0.16
Upf3a-201ENSMUST00000043767 Dad1P61804 113 aa16.03■□□□□ 0.16
Upf3a-201ENSMUST00000043767 Ly6gP35461 111 aa16.02■□□□□ 0.15
Upf3a-201ENSMUST00000043767 Gm21748Q3UE70 102 aa16.02■□□□□ 0.15
Upf3a-201ENSMUST00000043767 Igkv4-72A0A0B4J1I4 117 aa16.01■□□□□ 0.15
Upf3a-201ENSMUST00000043767 Rpl36aP83882 106 aaKnown RBP16■□□□□ 0.15
Upf3a-201ENSMUST00000043767 Ighv1-59A0A0A6YXE0 117 aa15.99■□□□□ 0.15
Upf3a-201ENSMUST00000043767 Cox7a1P56392 80 aa15.99■□□□□ 0.15
Upf3a-201ENSMUST00000043767 Ppp1r32Q148A4 427 aa15.99■□□□□ 0.15
Upf3a-201ENSMUST00000043767 Gm904Q3V2L5 102 aa15.99■□□□□ 0.15
Upf3a-201ENSMUST00000043767 Trav4-3A0A0B4J1K1 110 aa15.98■□□□□ 0.15
Upf3a-201ENSMUST00000043767 Ighv1-72P01751 139 aa15.98■□□□□ 0.15
Upf3a-201ENSMUST00000043767 Gm3618D3Z4P5 127 aa15.97■□□□□ 0.15
Upf3a-201ENSMUST00000043767 Anapc13Q8R034 74 aa15.97■□□□□ 0.15
Upf3a-201ENSMUST00000043767 Gm2916Q9D9B9 127 aa15.97■□□□□ 0.15
Upf3a-201ENSMUST00000043767 Dnah3Q8BW94 4083 aa15.97■□□□□ 0.15
Upf3a-201ENSMUST00000043767 Gm9513B3GLJ6 99 aa15.96■□□□□ 0.15
Upf3a-201ENSMUST00000043767 Gm10135F6TEE5 83 aa15.96■□□□□ 0.15
Upf3a-201ENSMUST00000043767 B9d2Q3UK10 175 aa15.96■□□□□ 0.15
Upf3a-201ENSMUST00000043767 Trav4d-3A0A075B625 110 aa15.96■□□□□ 0.15
Upf3a-201ENSMUST00000043767 Tmem213Q08EA8 116 aa15.96■□□□□ 0.15
Upf3a-201ENSMUST00000043767 Ighv1-11A0A0A6YWI9 117 aa15.95■□□□□ 0.14
Upf3a-201ENSMUST00000043767 Igkv4-61A0A0G2JH00 117 aa15.95■□□□□ 0.14
Upf3a-201ENSMUST00000043767 Tmem101Q91VP7 257 aa15.95■□□□□ 0.14
Upf3a-201ENSMUST00000043767 Timm17bQ9Z0V7 172 aa15.95■□□□□ 0.14
Upf3a-201ENSMUST00000043767 Gm17472A0A075B683 117 aa15.94■□□□□ 0.14
Upf3a-201ENSMUST00000043767 Esp24A8R0V6 68 aa15.94■□□□□ 0.14
Upf3a-201ENSMUST00000043767 Igkv4-78A0A0A6YYE5 119 aa15.93■□□□□ 0.14
Upf3a-201ENSMUST00000043767 Atp5g3P56384 141 aa15.93■□□□□ 0.14
Upf3a-201ENSMUST00000043767 Atp5g1Q9CR84 136 aa15.93■□□□□ 0.14
Upf3a-201ENSMUST00000043767 Klk9Q32M27 251 aa15.93■□□□□ 0.14
Upf3a-201ENSMUST00000043767 Spink1P09036 80 aa15.92■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 63.3 ms