RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Igkv3-5A0A140T8M6 119 aa8.58□□□□□ -1.04
Pcif1-201ENSMUST00000041643 Ube2aQ9Z255 152 aa8.58□□□□□ -1.04
Pcif1-201ENSMUST00000041643 Igkv1-35A0A0G2JDE5 120 aa8.58□□□□□ -1.04
Pcif1-201ENSMUST00000041643 Gm21748Q3UE70 102 aa8.58□□□□□ -1.04
Pcif1-201ENSMUST00000041643 Pkd1l2Q7TN88 2461 aa8.58□□□□□ -1.04
Pcif1-201ENSMUST00000041643 PscaP57096 123 aa8.58□□□□□ -1.04
Pcif1-201ENSMUST00000041643 Fam19a1Q7TPG8 133 aa8.58□□□□□ -1.04
Pcif1-201ENSMUST00000041643 Rbmy1bQ60990 380 aa8.57□□□□□ -1.04
Pcif1-201ENSMUST00000041643 CenpfE9Q3P4 2997 aaKnown RBP8.57□□□□□ -1.04
Pcif1-201ENSMUST00000041643 Rtl10D3YWW5 146 aa8.57□□□□□ -1.04
Pcif1-201ENSMUST00000041643 Trbv13-2A0A140T8N6 113 aa8.57□□□□□ -1.04
Pcif1-201ENSMUST00000041643 AngP21570 145 aa8.57□□□□□ -1.04
Pcif1-201ENSMUST00000041643 Defa23Q5G866 93 aa8.56□□□□□ -1.04
Pcif1-201ENSMUST00000041643 Inafm2A0A1L1STD6 152 aa8.56□□□□□ -1.04
Pcif1-201ENSMUST00000041643 Chd8Q09XV5 2582 aaKnown RBP8.56□□□□□ -1.04
Pcif1-201ENSMUST00000041643 Ube2d1P61080 147 aaKnown RBP8.56□□□□□ -1.04
Pcif1-201ENSMUST00000041643 Tax1bp3Q9DBG9 124 aa8.56□□□□□ -1.04
Pcif1-201ENSMUST00000041643 Nav2E9Q842 2432 aa8.56□□□□□ -1.04
Pcif1-201ENSMUST00000041643 Defa25Q5G864 92 aa8.56□□□□□ -1.04
Pcif1-201ENSMUST00000041643 Igkv2-109A0A075B5K6 120 aa8.56□□□□□ -1.04
Pcif1-201ENSMUST00000041643 9430015G10RikA2ASP7 199 aa8.55□□□□□ -1.04
Pcif1-201ENSMUST00000041643 Lrrk2Q5S006 2527 aa8.55□□□□□ -1.04
Pcif1-201ENSMUST00000041643 Igkv8-18A0A0B4J1J3 123 aa8.54□□□□□ -1.04
Pcif1-201ENSMUST00000041643 Gm26602M0QWA4 95 aa8.54□□□□□ -1.04
Pcif1-201ENSMUST00000041643 P01823 113 aa8.54□□□□□ -1.04
Pcif1-201ENSMUST00000041643 Wfdc15aQ8BH89 80 aa8.54□□□□□ -1.04
Pcif1-201ENSMUST00000041643 Gm10322F7D7I4 111 aa8.54□□□□□ -1.04
Pcif1-201ENSMUST00000041643 Rpl39lQ9CQD0 51 aa8.54□□□□□ -1.04
Pcif1-201ENSMUST00000041643 CtrlQ9ER05 264 aa8.54□□□□□ -1.04
Pcif1-201ENSMUST00000041643 Gm3250E9Q1M3 230 aa8.54□□□□□ -1.04
Pcif1-201ENSMUST00000041643 Nupr2Q497P3 102 aa8.53□□□□□ -1.04
Pcif1-201ENSMUST00000041643 Cdc42se2Q8BGH7 84 aa8.53□□□□□ -1.04
Pcif1-201ENSMUST00000041643 Ighv1-61P01749 117 aa8.53□□□□□ -1.04
Pcif1-201ENSMUST00000041643 Gpha2Q925Q5 128 aa8.53□□□□□ -1.04
Pcif1-201ENSMUST00000041643 P01755 137 aa8.53□□□□□ -1.04
Pcif1-201ENSMUST00000041643 Prrc2aQ7TSC1 2158 aaKnown RBP8.53□□□□□ -1.04
Pcif1-201ENSMUST00000041643 Fam240bJ3QMB3 78 aa8.52□□□□□ -1.05
Pcif1-201ENSMUST00000041643 A830031A19RikQ8BNT5 113 aa8.52□□□□□ -1.05
Pcif1-201ENSMUST00000041643 Ighv1-62-1A0A075B5U3 116 aa8.52□□□□□ -1.05
Pcif1-201ENSMUST00000041643 Pla2g2eQ9QUL3 142 aa8.52□□□□□ -1.05
Pcif1-201ENSMUST00000041643 Spink4O35679 86 aa8.52□□□□□ -1.05
Pcif1-201ENSMUST00000041643 Ttc28Q80XJ3 2450 aa8.52□□□□□ -1.05
Pcif1-201ENSMUST00000041643 P06329 120 aa8.51□□□□□ -1.05
Pcif1-201ENSMUST00000041643 Plac8l1Q08EJ0 177 aa8.51□□□□□ -1.05
Pcif1-201ENSMUST00000041643 PpdpfQ9CR37 115 aa8.51□□□□□ -1.05
Pcif1-201ENSMUST00000041643 Trav3-4A0A075B654 114 aa8.51□□□□□ -1.05
Pcif1-201ENSMUST00000041643 Ighv8-5A0A0A6YY60 119 aa8.51□□□□□ -1.05
Pcif1-201ENSMUST00000041643 Krtap24-1G3X9A2 248 aa8.51□□□□□ -1.05
Pcif1-201ENSMUST00000041643 Defa21Q8C1P2 93 aa8.5□□□□□ -1.05
Pcif1-201ENSMUST00000041643 Ly6hQ9WUC3 139 aa8.5□□□□□ -1.05
Pcif1-201ENSMUST00000041643 Myo9aQ8C170 2542 aa8.5□□□□□ -1.05
Pcif1-201ENSMUST00000041643 Fam19a5Q91WE9 132 aa8.5□□□□□ -1.05
Pcif1-201ENSMUST00000041643 Tnfrsf23Q9ER63 176 aa8.49□□□□□ -1.05
Pcif1-201ENSMUST00000041643 Gm37389A0A0A6YW05 95 aa8.49□□□□□ -1.05
Pcif1-201ENSMUST00000041643 Cox8cA6H666 72 aa8.49□□□□□ -1.05
Pcif1-201ENSMUST00000041643 Tmem243B2RVB9 118 aa8.49□□□□□ -1.05
Pcif1-201ENSMUST00000041643 Acyp1P56376 99 aa8.49□□□□□ -1.05
Pcif1-201ENSMUST00000041643 BC067074F6RXI4 2391 aa8.48□□□□□ -1.05
Pcif1-201ENSMUST00000041643 Ighv8-13A0A075B5Y0 101 aa8.48□□□□□ -1.05
Pcif1-201ENSMUST00000041643 A0A286YCN5 57 aa8.48□□□□□ -1.05
Pcif1-201ENSMUST00000041643 Timm17bQ9Z0V7 172 aa8.48□□□□□ -1.05
Pcif1-201ENSMUST00000041643 Fgf23Q9EPC2 251 aa8.48□□□□□ -1.05
Pcif1-201ENSMUST00000041643 Tcl1b3P56842 122 aa8.48□□□□□ -1.05
Pcif1-201ENSMUST00000041643 Wfdc12Q9JHY3 85 aa8.47□□□□□ -1.05
Pcif1-201ENSMUST00000041643 Smim1P0C8K7 78 aa8.47□□□□□ -1.05
Pcif1-201ENSMUST00000041643 Ptpn13Q64512 2453 aa8.47□□□□□ -1.05
Pcif1-201ENSMUST00000041643 Igkv4-92A0A0B4J1I2 117 aa8.46□□□□□ -1.05
Pcif1-201ENSMUST00000041643 Arid1bE9Q4N7 2244 aa8.46□□□□□ -1.05
Pcif1-201ENSMUST00000041643 Crip3Q6Q6R3 243 aa8.46□□□□□ -1.06
Pcif1-201ENSMUST00000041643 Dscaml1Q4VA61 2053 aa8.46□□□□□ -1.06
Pcif1-201ENSMUST00000041643 BB014433Q8C5R5 389 aa8.45□□□□□ -1.06
Pcif1-201ENSMUST00000041643 Igkv3-10A0A0G2JGN0 119 aa8.45□□□□□ -1.06
Pcif1-201ENSMUST00000041643 Gm9805F6YK59 57 aa8.45□□□□□ -1.06
Pcif1-201ENSMUST00000041643 Tfpi2O35536 230 aa8.45□□□□□ -1.06
Pcif1-201ENSMUST00000041643 HttP42859 3119 aa8.44□□□□□ -1.06
Pcif1-201ENSMUST00000041643 Psmb11Q8BG41 302 aa8.44□□□□□ -1.06
Pcif1-201ENSMUST00000041643 Ighv8-11A0A075B5X4 119 aa8.44□□□□□ -1.06
Pcif1-201ENSMUST00000041643 Gm26661M0QWV4 156 aa8.44□□□□□ -1.06
Pcif1-201ENSMUST00000041643 SycnQ8VCK7 134 aa8.44□□□□□ -1.06
Pcif1-201ENSMUST00000041643 Hcfc1Q61191 2045 aaKnown RBP8.44□□□□□ -1.06
Pcif1-201ENSMUST00000041643 Ighv2-9-1A0A075B697 116 aa8.44□□□□□ -1.06
Pcif1-201ENSMUST00000041643 Obox2E9PXV9 151 aa8.43□□□□□ -1.06
Pcif1-201ENSMUST00000041643 Rnf152Q8BG47 203 aa8.43□□□□□ -1.06
Pcif1-201ENSMUST00000041643 Lama2Q60675 3118 aaKnown RBP8.43□□□□□ -1.06
Pcif1-201ENSMUST00000041643 1700011M02RikB1AX35 88 aa8.43□□□□□ -1.06
Pcif1-201ENSMUST00000041643 Igkv4-58A0A0G2JGI6 119 aa8.42□□□□□ -1.06
Pcif1-201ENSMUST00000041643 Gm12353A2AGJ4 60 aa8.42□□□□□ -1.06
Pcif1-201ENSMUST00000041643 TrioQ0KL02 3102 aa8.42□□□□□ -1.06
Pcif1-201ENSMUST00000041643 Ly6g6cQ9Z1Q4 126 aa8.42□□□□□ -1.06
Pcif1-201ENSMUST00000041643 Ankhd1E9PUR0 2548 aaKnown RBP8.42□□□□□ -1.06
Pcif1-201ENSMUST00000041643 SrarpQ3ULG3 163 aa8.41□□□□□ -1.06
Pcif1-201ENSMUST00000041643 Brwd1Q921C3 2304 aa8.41□□□□□ -1.06
Pcif1-201ENSMUST00000041643 B230307C23RikQ8BLB2 64 aa8.41□□□□□ -1.06
Pcif1-201ENSMUST00000041643 Gm10401E9Q3K6 71 aa8.4□□□□□ -1.06
Pcif1-201ENSMUST00000041643 Gm1968Q3T9I3 115 aa8.4□□□□□ -1.06
Pcif1-201ENSMUST00000041643 Ighv10-1A0A0B4J1J6 119 aa8.4□□□□□ -1.07
Pcif1-201ENSMUST00000041643 Scgb1b2O35176 93 aa8.39□□□□□ -1.07
Pcif1-201ENSMUST00000041643 Gm17521F6QAC8 156 aa8.39□□□□□ -1.07
Pcif1-201ENSMUST00000041643 Rbm3O89086 153 aaKnown RBP8.39□□□□□ -1.07
Pcif1-201ENSMUST00000041643 Igkv3-4A0A140T8Q4 119 aa8.38□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 55.6 ms