RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Ighv2-3A0A075B696 115 aa7.4□□□□□ -1.22
Ldlr-201ENSMUST00000034713 1700056E22RikF7CNM6 234 aa7.4□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Gm10322F7D7I4 111 aa7.4□□□□□ -1.22
Ldlr-201ENSMUST00000034713 Igkv4-78A0A0A6YYE5 119 aa7.4□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Gm7257D3YX25 99 aa7.39□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Ube2d1P61080 147 aaKnown RBP7.39□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Tm2d2Q8R0I4 213 aa7.39□□□□□ -1.23
Ldlr-201ENSMUST00000034713 P84751 237 aa7.39□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Ighv1-5A0A0A6YWG2 117 aa7.39□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Gm10542F6XDR3 90 aa7.39□□□□□ -1.23
Ldlr-201ENSMUST00000034713 PlaurP35456 327 aa7.39□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Ppp1r32Q148A4 427 aa7.39□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Gm1968Q3T9I3 115 aa7.39□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Gm10518F6UQQ9 182 aa7.38□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Prrc2cQ3TLH4 2846 aaKnown RBP7.38□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Psmb8P28063 276 aa7.38□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Ucn2Q99ML8 113 aa7.38□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Spink8Q09TK9 105 aa7.37□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Sslp1Q3UN54 99 aa7.37□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Dph3Q8K0W9 82 aa7.37□□□□□ -1.23
Ldlr-201ENSMUST00000034713 4930470P17RikQ9D542 155 aa7.37□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Gm12353A2AGJ4 60 aa7.37□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Edn2P22389 175 aa7.37□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Prp2P05143 317 aa7.37□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Gm10577Q3UDV9 132 aa7.37□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Map1aQ9QYR6 2776 aa7.37□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Prrc2aQ7TSC1 2158 aaKnown RBP7.37□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Trav13d-4A0A0G2JFX3 110 aa7.37□□□□□ -1.23
Ldlr-201ENSMUST00000034713 MifP34884 115 aaKnown RBP7.37□□□□□ -1.23
Ldlr-201ENSMUST00000034713 PrcdQ00LT2 53 aa7.37□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Itpr1P11881 2749 aa7.36□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Vpreb2P13373 142 aa7.36□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Ube2d3P61079 147 aa7.36□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Ube2d2P62838 147 aa7.36□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Igkv1-35A0A0G2JDE5 120 aa7.36□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Ighv1-63A0A075B5X2 117 aa7.36□□□□□ -1.23
Ldlr-201ENSMUST00000034713 TroQ6DIC6 2087 aa7.35□□□□□ -1.23
Ldlr-201ENSMUST00000034713 C1qcQ02105 246 aa7.35□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Gata1P17679 413 aa7.35□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Crip3Q6Q6R3 243 aa7.35□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Gm17472A0A075B683 117 aa7.35□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Cox7b2Q9D2H1 82 aa7.35□□□□□ -1.23
Ldlr-201ENSMUST00000034713 AspmQ8CJ27 3122 aa7.34□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Ly6gP35461 111 aa7.34□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Smrp1Q2MH31 260 aa7.34□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Vpreb1P13372 142 aa7.34□□□□□ -1.23
Ldlr-201ENSMUST00000034713 SbsponQ3UPR9 264 aa7.34□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Gm16223Q8CBM3 117 aa7.34□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Ly6hQ9WUC3 139 aa7.34□□□□□ -1.23
Ldlr-201ENSMUST00000034713 Trav13-4-dv7A0A075B6C2 110 aa7.34□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Trav13n-2A0A0G2JF93 110 aa7.34□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Q9DAB9 146 aa7.34□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Igkv2-109A0A075B5K6 120 aa7.33□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Ighv1-62-1A0A075B5U3 116 aa7.33□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Ube2d4D3YUH6 135 aa7.33□□□□□ -1.24
Ldlr-201ENSMUST00000034713 BikO70337 150 aa7.33□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Serp2Q6TAW2 65 aa7.33□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Rpl39lQ9CQD0 51 aa7.33□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Epg5Q80TA9 2572 aa7.33□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Trav13-2A0A075B649 110 aa7.33□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Cd27P41272 250 aa7.33□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Lrrc37aB1AWG4 3215 aa7.33□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Ighv13-2A0A0A6YWN3 119 aa7.32□□□□□ -1.24
Ldlr-201ENSMUST00000034713 LhbO09108 141 aa7.32□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Trav13-1A0A075B644 110 aa7.32□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Igkv1-122A0A140T8M9 119 aa7.32□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Chchd7Q8K2Q5 85 aa7.32□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Klk12B2RVZ0 247 aa7.31□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Rpl18aP62717 176 aaKnown RBP7.31□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Klk5Q9D140 293 aa7.31□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Igkv4-58A0A0G2JGI6 119 aa7.31□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Gm8439G3UWA7 96 aa7.31□□□□□ -1.24
Ldlr-201ENSMUST00000034713 SrarpQ3ULG3 163 aa7.31□□□□□ -1.24
Ldlr-201ENSMUST00000034713 P01823 113 aa7.31□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Camk2n2Q78WH7 79 aa7.31□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Fbn2Q61555 2907 aa7.3□□□□□ -1.24
Ldlr-201ENSMUST00000034713 B230359F08RikA0A0B4J1K3 109 aa7.3□□□□□ -1.24
Ldlr-201ENSMUST00000034713 P01745 121 aa7.3□□□□□ -1.24
Ldlr-201ENSMUST00000034713 A830031A19RikQ8BNT5 113 aa7.3□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Klk11Q9QYN3 276 aa7.3□□□□□ -1.24
Ldlr-201ENSMUST00000034713 4930564D02RikQ9D4S4 103 aa7.3□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Ash1lQ99MY8 2958 aa7.3□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Gm10337F7DEP7 55 aa7.29□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Sox16Q62247 57 aa7.29□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Ighv10-1A0A0B4J1J6 119 aa7.29□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Gm26566Q8CAC1 153 aa7.29□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Dmxl1Q6PNC0 3013 aa7.29□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Krtap27-1E9PX37 202 aa7.29□□□□□ -1.24
Ldlr-201ENSMUST00000034713 FlnbQ80X90 2602 aaKnown RBP7.28□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Trav9n-4A0A075B631 113 aa7.28□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Igkv8-18A0A0B4J1J3 123 aa7.28□□□□□ -1.24
Ldlr-201ENSMUST00000034713 CenpwQ3URR0 86 aa7.28□□□□□ -1.24
Ldlr-201ENSMUST00000034713 KalrnA2CG49 2964 aa7.28□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Gm10509O88255 85 aa7.28□□□□□ -1.24
Ldlr-201ENSMUST00000034713 5730596B20RikQ8BQ08 205 aa7.28□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Nbeal1E9PYP2 2688 aa7.28□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Fhl2O70433 279 aa7.28□□□□□ -1.24
Ldlr-201ENSMUST00000034713 Ube2bP63147 152 aa7.27□□□□□ -1.25
Ldlr-201ENSMUST00000034713 Col6a3E9PWQ3 3284 aa7.27□□□□□ -1.25
Ldlr-201ENSMUST00000034713 Gm9767G3X930 207 aa7.27□□□□□ -1.25
Retrieved 100 of 22,080 RNA–protein pairs in 60.4 ms