RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 Cd27P41272 250 aa11.28□□□□□ -0.6
Col2a1-201ENSMUST00000023123 Gm6899Q3USS0 134 aa11.28□□□□□ -0.6
Col2a1-201ENSMUST00000023123 Fgf23Q9EPC2 251 aa11.28□□□□□ -0.6
Col2a1-201ENSMUST00000023123 Gm10226O88253 85 aa11.27□□□□□ -0.6
Col2a1-201ENSMUST00000023123 Pip4p1Q3TWL2 284 aa11.27□□□□□ -0.6
Col2a1-201ENSMUST00000023123 5730596B20RikQ8BQ08 205 aa11.27□□□□□ -0.6
Col2a1-201ENSMUST00000023123 2010109I03RikQ9CQ11 111 aa11.27□□□□□ -0.6
Col2a1-201ENSMUST00000023123 1520401A03RikA0A0J9YVH6 598 aa11.27□□□□□ -0.61
Col2a1-201ENSMUST00000023123 Ighv1-63A0A075B5X2 117 aa11.26□□□□□ -0.61
Col2a1-201ENSMUST00000023123 Atox1O08997 68 aaKnown RBP11.26□□□□□ -0.61
Col2a1-201ENSMUST00000023123 P01729 129 aa11.26□□□□□ -0.61
Col2a1-201ENSMUST00000023123 A830005F24RikQ8BRT5 167 aa11.25□□□□□ -0.61
Col2a1-201ENSMUST00000023123 Spry2Q9QXV8 315 aa11.25□□□□□ -0.61
Col2a1-201ENSMUST00000023123 Ighv1-5A0A0A6YWG2 117 aa11.25□□□□□ -0.61
Col2a1-201ENSMUST00000023123 Ube2d1P61080 147 aaKnown RBP11.25□□□□□ -0.61
Col2a1-201ENSMUST00000023123 Ighv1-72P01751 139 aa11.24□□□□□ -0.61
Col2a1-201ENSMUST00000023123 4930535I16RikQ9CUI2 172 aa11.24□□□□□ -0.61
Col2a1-201ENSMUST00000023123 Ighv8-11A0A075B5X4 119 aa11.24□□□□□ -0.61
Col2a1-201ENSMUST00000023123 TroQ6DIC6 2087 aa11.24□□□□□ -0.61
Col2a1-201ENSMUST00000023123 Tet2Q4JK59 1912 aaKnown RBP11.24□□□□□ -0.61
Col2a1-201ENSMUST00000023123 LhbO09108 141 aa11.23□□□□□ -0.61
Col2a1-201ENSMUST00000023123 Cox7bP56393 80 aa11.23□□□□□ -0.61
Col2a1-201ENSMUST00000023123 SrarpQ3ULG3 163 aa11.23□□□□□ -0.61
Col2a1-201ENSMUST00000023123 Igkv4-92A0A0B4J1I2 117 aa11.23□□□□□ -0.61
Col2a1-201ENSMUST00000023123 Fer1l4A3KGK3 1992 aa11.23□□□□□ -0.61
Col2a1-201ENSMUST00000023123 Fam19a1Q7TPG8 133 aa11.23□□□□□ -0.61
Col2a1-201ENSMUST00000023123 Tanc2A2A690 1994 aa11.22□□□□□ -0.61
Col2a1-201ENSMUST00000023123 Wdr90Q6ZPG2 1874 aa11.22□□□□□ -0.61
Col2a1-201ENSMUST00000023123 Gm19935A0A1B0GSF9 52 aa11.22□□□□□ -0.61
Col2a1-201ENSMUST00000023123 1110002E22RikE0CYV9 1786 aa11.22□□□□□ -0.61
Col2a1-201ENSMUST00000023123 Smrp1Q2MH31 260 aa11.22□□□□□ -0.61
Col2a1-201ENSMUST00000023123 A830031A19RikQ8BNT5 113 aa11.22□□□□□ -0.61
Col2a1-201ENSMUST00000023123 Chchd7Q8K2Q5 85 aa11.22□□□□□ -0.61
Col2a1-201ENSMUST00000023123 Plac8l1Q08EJ0 177 aa11.21□□□□□ -0.61
Col2a1-201ENSMUST00000023123 Ndufs5Q99LY9 106 aa11.21□□□□□ -0.62
Col2a1-201ENSMUST00000023123 H2al1bA0A087WP11 105 aa11.21□□□□□ -0.62
Col2a1-201ENSMUST00000023123 Gm10337F7DEP7 55 aa11.21□□□□□ -0.62
Col2a1-201ENSMUST00000023123 Ube2d3P61079 147 aa11.21□□□□□ -0.62
Col2a1-201ENSMUST00000023123 Ube2d2P62838 147 aa11.21□□□□□ -0.62
Col2a1-201ENSMUST00000023123 Gm21748Q3UE70 102 aa11.21□□□□□ -0.62
Col2a1-201ENSMUST00000023123 Esm1Q9QYY7 184 aa11.21□□□□□ -0.62
Col2a1-201ENSMUST00000023123 BaalcQ8VHV1 145 aa11.2□□□□□ -0.62
Col2a1-201ENSMUST00000023123 Wisp2Q9Z0G4 251 aa11.2□□□□□ -0.62
Col2a1-201ENSMUST00000023123 1700011M02RikB1AX35 88 aa11.2□□□□□ -0.62
Col2a1-201ENSMUST00000023123 Fhl2O70433 279 aa11.2□□□□□ -0.62
Col2a1-201ENSMUST00000023123 Sec61gP60060 68 aa11.2□□□□□ -0.62
Col2a1-201ENSMUST00000023123 Gm20604F8WIA3 75 aa11.19□□□□□ -0.62
Col2a1-201ENSMUST00000023123 P01755 137 aa11.19□□□□□ -0.62
Col2a1-201ENSMUST00000023123 Gm10490F6VBM2 120 aa11.19□□□□□ -0.62
Col2a1-201ENSMUST00000023123 1700056E22RikF7CNM6 234 aa11.19□□□□□ -0.62
Col2a1-201ENSMUST00000023123 Adamts20P59511 1906 aa11.17□□□□□ -0.62
Col2a1-201ENSMUST00000023123 Ovol3D3YYM0 189 aa11.17□□□□□ -0.62
Col2a1-201ENSMUST00000023123 Ndufb1P0DN34 57 aa11.17□□□□□ -0.62
Col2a1-201ENSMUST00000023123 Defb13Q8R2I4 64 aa11.17□□□□□ -0.62
Col2a1-201ENSMUST00000023123 NrgnP60761 78 aa11.16□□□□□ -0.62
Col2a1-201ENSMUST00000023123 Ighv1-59A0A0A6YXE0 117 aa11.16□□□□□ -0.62
Col2a1-201ENSMUST00000023123 NpwA0A1L1STR8 176 aa11.16□□□□□ -0.62
Col2a1-201ENSMUST00000023123 Hivep3A2A884 2348 aa11.15□□□□□ -0.62
Col2a1-201ENSMUST00000023123 Igkv3-4A0A140T8Q4 119 aa11.15□□□□□ -0.62
Col2a1-201ENSMUST00000023123 Trav14-1A0A0G2JF94 121 aa11.15□□□□□ -0.62
Col2a1-201ENSMUST00000023123 PrlhG3UWC3 86 aa11.15□□□□□ -0.62
Col2a1-201ENSMUST00000023123 Gm10509O88255 85 aa11.15□□□□□ -0.63
Col2a1-201ENSMUST00000023123 OtoglF7A4A7 2325 aa11.14□□□□□ -0.63
Col2a1-201ENSMUST00000023123 Igkv1-110A0A0B4J1I0 119 aa11.14□□□□□ -0.63
Col2a1-201ENSMUST00000023123 Igkv1-117A0A140T8M0 119 aa11.14□□□□□ -0.63
Col2a1-201ENSMUST00000023123 Igkv3-3A0A140T8Q0 119 aa11.14□□□□□ -0.63
Col2a1-201ENSMUST00000023123 Gm10647E9Q8X0 124 aa11.14□□□□□ -0.63
Col2a1-201ENSMUST00000023123 Ly6c2P0CW03 131 aa11.14□□□□□ -0.63
Col2a1-201ENSMUST00000023123 Smr3aQ61900 147 aa11.14□□□□□ -0.63
Col2a1-201ENSMUST00000023123 Cdc42se2Q8BGH7 84 aa11.14□□□□□ -0.63
Col2a1-201ENSMUST00000023123 9230102O04RikA2ASX7 82 aa11.14□□□□□ -0.63
Col2a1-201ENSMUST00000023123 Arhgap32Q811P8 2089 aa11.13□□□□□ -0.63
Col2a1-201ENSMUST00000023123 4930564D02RikQ9D4S4 103 aa11.13□□□□□ -0.63
Col2a1-201ENSMUST00000023123 Chd8Q09XV5 2582 aaKnown RBP11.12□□□□□ -0.63
Col2a1-201ENSMUST00000023123 ScxQ64124 207 aa11.12□□□□□ -0.63
Col2a1-201ENSMUST00000023123 Dkk4Q8VEJ3 221 aa11.12□□□□□ -0.63
Col2a1-201ENSMUST00000023123 4930524J08RikQ9CUJ5 163 aa11.12□□□□□ -0.63
Col2a1-201ENSMUST00000023123 BC067074F6RXI4 2391 aa11.12□□□□□ -0.63
Col2a1-201ENSMUST00000023123 Gm9925F6T2U3 160 aa11.12□□□□□ -0.63
Col2a1-201ENSMUST00000023123 Rpl28P41105 137 aaKnown RBP11.12□□□□□ -0.63
Col2a1-201ENSMUST00000023123 DscamQ9ERC8 2013 aa11.11□□□□□ -0.63
Col2a1-201ENSMUST00000023123 Tcl1b5P56845 121 aa11.11□□□□□ -0.63
Col2a1-201ENSMUST00000023123 Obox2E9PXV9 151 aa11.11□□□□□ -0.63
Col2a1-201ENSMUST00000023123 PlaurP35456 327 aa11.11□□□□□ -0.63
Col2a1-201ENSMUST00000023123 C2cd3Q52KB6 2323 aa11.1□□□□□ -0.63
Col2a1-201ENSMUST00000023123 Sptbn4E9PX29 2561 aa11.1□□□□□ -0.63
Col2a1-201ENSMUST00000023123 H2al1aQ5M8Q2 105 aa11.1□□□□□ -0.63
Col2a1-201ENSMUST00000023123 H2al1eQ810S6 105 aa11.1□□□□□ -0.63
Col2a1-201ENSMUST00000023123 Cyyr1Q8VIH7 165 aa11.1□□□□□ -0.63
Col2a1-201ENSMUST00000023123 Wfdc12Q9JHY3 85 aa11.09□□□□□ -0.63
Col2a1-201ENSMUST00000023123 Serp1Q9Z1W5 66 aa11.09□□□□□ -0.63
Col2a1-201ENSMUST00000023123 Ighv10-3A0A075B5T6 119 aa11.08□□□□□ -0.64
Col2a1-201ENSMUST00000023123 Wfdc10Q3V2J9 124 aa11.07□□□□□ -0.64
Col2a1-201ENSMUST00000023123 CdsnQ7TPC1 561 aa11.07□□□□□ -0.64
Col2a1-201ENSMUST00000023123 Ccdc179J3QM76 67 aa11.07□□□□□ -0.64
Col2a1-201ENSMUST00000023123 Spink13Q3UTS8 97 aa11.07□□□□□ -0.64
Col2a1-201ENSMUST00000023123 Defb40Q70KL2 73 aa11.07□□□□□ -0.64
Col2a1-201ENSMUST00000023123 A0A286YCN5 57 aa11.07□□□□□ -0.64
Col2a1-201ENSMUST00000023123 Krtap27-1E9PX37 202 aa11.07□□□□□ -0.64
Col2a1-201ENSMUST00000023123 Pla2g2cP48076 150 aa11.07□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 49.2 ms