RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Wfdc15bQ9JHY4 80 aa8.43□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Igkv4-90A0A075B5L3 117 aa8.42□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Gm9887F6RFI0 207 aa8.42□□□□□ -1.06
Sdc1-201ENSMUST00000020911 OdaphJ3QNT8 126 aa8.42□□□□□ -1.06
Sdc1-201ENSMUST00000020911 RhohQ9D3G9 191 aa8.42□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Mob4Q6PEB6 225 aa8.42□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Socs3O35718 225 aa8.41□□□□□ -1.06
Sdc1-201ENSMUST00000020911 H1fxQ80ZM5 188 aa8.41□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Lyzl4Q9D925 145 aa8.41□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Nf1Q04690 2841 aa8.41□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Ube2d4D3YUH6 135 aa8.41□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Polr2kQ63871 58 aa8.41□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Fam19a1Q7TPG8 133 aa8.41□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Defa28D3Z1V9 94 aa8.4□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Serp1Q9Z1W5 66 aa8.4□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Ighv3-1A0A075B5S6 116 aa8.4□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Ighv1-4A0A075B5T4 117 aa8.4□□□□□ -1.06
Sdc1-201ENSMUST00000020911 P01819 144 aa8.4□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Fam110dQ80X91 271 aa8.4□□□□□ -1.06
Sdc1-201ENSMUST00000020911 BC067074F6RXI4 2391 aa8.4□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Ighv1-80A0A075B5Y3 117 aa8.4□□□□□ -1.07
Sdc1-201ENSMUST00000020911 LrbaQ9ESE1 2856 aa8.4□□□□□ -1.07
Sdc1-201ENSMUST00000020911 Ighv1-74A0A0G2JGK2 117 aa8.39□□□□□ -1.07
Sdc1-201ENSMUST00000020911 Krtap16-1A2A5X5 502 aa8.39□□□□□ -1.07
Sdc1-201ENSMUST00000020911 Chd9Q8BYH8 2885 aa8.39□□□□□ -1.07
Sdc1-201ENSMUST00000020911 Bub3Q9WVA3 326 aa8.39□□□□□ -1.07
Sdc1-201ENSMUST00000020911 Wnk1P83741 2377 aa8.39□□□□□ -1.07
Sdc1-201ENSMUST00000020911 Defb18Q30KP5 85 aa8.38□□□□□ -1.07
Sdc1-201ENSMUST00000020911 Ighv12-3A0A075B5T1 117 aa8.38□□□□□ -1.07
Sdc1-201ENSMUST00000020911 1700056E22RikF7CNM6 234 aa8.38□□□□□ -1.07
Sdc1-201ENSMUST00000020911 Gm37988J3QM41 62 aa8.38□□□□□ -1.07
Sdc1-201ENSMUST00000020911 Rbm3O89086 153 aaKnown RBP8.38□□□□□ -1.07
Sdc1-201ENSMUST00000020911 SelenowP63300 88 aa8.38□□□□□ -1.07
Sdc1-201ENSMUST00000020911 MtorQ9JLN9 2549 aa8.38□□□□□ -1.07
Sdc1-201ENSMUST00000020911 Ighv1-58A0A075B5W9 117 aa8.38□□□□□ -1.07
Sdc1-201ENSMUST00000020911 Prelid3aQ8VE85 172 aa8.38□□□□□ -1.07
Sdc1-201ENSMUST00000020911 4930442H23RikQ9D5G7 103 aa8.38□□□□□ -1.07
Sdc1-201ENSMUST00000020911 Fgf23Q9EPC2 251 aa8.38□□□□□ -1.07
Sdc1-201ENSMUST00000020911 Spink12Q9D256 87 aa8.37□□□□□ -1.07
Sdc1-201ENSMUST00000020911 LystP97412 3788 aa8.37□□□□□ -1.07
Sdc1-201ENSMUST00000020911 Trav13n-1A0A0G2JEU8 110 aa8.36□□□□□ -1.07
Sdc1-201ENSMUST00000020911 9230102O04RikA2ASX7 82 aa8.36□□□□□ -1.07
Sdc1-201ENSMUST00000020911 Defb29Q8BGW9 78 aa8.36□□□□□ -1.07
Sdc1-201ENSMUST00000020911 EnhoQ8K1D8 76 aa8.36□□□□□ -1.07
Sdc1-201ENSMUST00000020911 Pfn2Q9JJV2 140 aa8.36□□□□□ -1.07
Sdc1-201ENSMUST00000020911 E130218I03RikA0A0U1RNU5 63 aa8.36□□□□□ -1.07
Sdc1-201ENSMUST00000020911 Dmbt1Q60997 2085 aa8.36□□□□□ -1.07
Sdc1-201ENSMUST00000020911 Ighv1-61P01749 117 aa8.36□□□□□ -1.07
Sdc1-201ENSMUST00000020911 CnbpP53996 178 aaKnown RBP8.36□□□□□ -1.07
Sdc1-201ENSMUST00000020911 Cox6b1P56391 86 aaKnown RBP8.36□□□□□ -1.07
Sdc1-201ENSMUST00000020911 AW146154Q3TPQ7 468 aa8.36□□□□□ -1.07
Sdc1-201ENSMUST00000020911 PlaurP35456 327 aa8.35□□□□□ -1.07
Sdc1-201ENSMUST00000020911 Q4KKZ1 196 aa8.35□□□□□ -1.07
Sdc1-201ENSMUST00000020911 Ighv1-5A0A0A6YWG2 117 aa8.35□□□□□ -1.07
Sdc1-201ENSMUST00000020911 Igkv20-101-2A0A0G2JDU3 113 aa8.35□□□□□ -1.07
Sdc1-201ENSMUST00000020911 Gm9913Q8BQQ2 135 aa8.35□□□□□ -1.07
Sdc1-201ENSMUST00000020911 Sostdc1Q9CQN4 206 aa8.35□□□□□ -1.07
Sdc1-201ENSMUST00000020911 MsmbO08540 113 aa8.34□□□□□ -1.07
Sdc1-201ENSMUST00000020911 CrygaP04345 174 aa8.34□□□□□ -1.07
Sdc1-201ENSMUST00000020911 Timm17bQ9Z0V7 172 aa8.34□□□□□ -1.07
Sdc1-201ENSMUST00000020911 Gphb5Q812B2 130 aa8.34□□□□□ -1.07
Sdc1-201ENSMUST00000020911 Myo18bE9PV66 2605 aa8.34□□□□□ -1.07
Sdc1-201ENSMUST00000020911 Spag11Q8K4N2 71 aa8.34□□□□□ -1.07
Sdc1-201ENSMUST00000020911 4930524J08RikQ9CUJ5 163 aa8.34□□□□□ -1.07
Sdc1-201ENSMUST00000020911 MplkipQ9D011 178 aa8.34□□□□□ -1.07
Sdc1-201ENSMUST00000020911 Pet100P0DJE0 76 aa8.33□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Prr9Q8BV84 116 aa8.33□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Gm5878E9PUB3 99 aa8.33□□□□□ -1.08
Sdc1-201ENSMUST00000020911 P06328 117 aa8.33□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Tmem254aP0DN89 123 aa8.33□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Tmem254bP0DN90 123 aa8.33□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Tmem254cP0DN91 123 aa8.33□□□□□ -1.08
Sdc1-201ENSMUST00000020911 FlnaQ8BTM8 2647 aaKnown RBP8.32□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Gm9513B3GLJ6 99 aa8.32□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Gm21994F6T2D2 329 aa8.32□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Ighv1-62-1A0A075B5U3 116 aa8.32□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Ighv1-72P01751 139 aa8.32□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Ccl21aP84444 133 aa8.32□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Ccl21bP86792 133 aa8.32□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Ccl21cP86793 133 aa8.32□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Gm9747Q810H1 104 aa8.32□□□□□ -1.08
Sdc1-201ENSMUST00000020911 3110018I06RikQ9CXS0 120 aa8.32□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Ankrd17Q99NH0 2603 aaKnown RBP8.31□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Gm20604F8WIA3 75 aa8.31□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Gm10553J3QPF1 123 aa8.31□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Igkv4-57-1A0A075B5M4 119 aa8.31□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Igkv4-59A0A0B4J1I8 117 aa8.31□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Lst1O08843 95 aa8.31□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Pou2af1Q64693 256 aa8.3□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Bles03Q8VD62 251 aa8.3□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Psmb11Q8BG41 302 aa8.3□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Synj2bpQ9D6K5 145 aa8.3□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Chd6A3KFM7 2711 aa8.3□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Sprr3O09116 238 aa8.3□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Unc79Q0KK59 2596 aa8.29□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Cep192E9Q4Y4 2514 aaKnown RBP8.29□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Dpm3Q9D1Q4 92 aa8.29□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Igkv4-91A0A075B5L2 119 aa8.29□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Gm17732E9Q5I2 61 aa8.29□□□□□ -1.08
Sdc1-201ENSMUST00000020911 Snrpd3P62320 126 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 270 ms