RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Apoc4Q61268 124 aa11.82□□□□□ -0.52
Trim28-201ENSMUST00000005705 Gm3233E9Q2H5 230 aa11.81□□□□□ -0.52
Trim28-201ENSMUST00000005705 Rpl35aO55142 110 aa11.81□□□□□ -0.52
Trim28-201ENSMUST00000005705 Bles03Q8VD62 251 aa11.81□□□□□ -0.52
Trim28-201ENSMUST00000005705 Spry2Q9QXV8 315 aa11.81□□□□□ -0.52
Trim28-201ENSMUST00000005705 Sh2d1aO88890 126 aa11.81□□□□□ -0.52
Trim28-201ENSMUST00000005705 Glrp1E9Q9S8 174 aa11.8□□□□□ -0.52
Trim28-201ENSMUST00000005705 PrlhG3UWC3 86 aa11.8□□□□□ -0.52
Trim28-201ENSMUST00000005705 Eif4ebp3Q80VV3 101 aa11.8□□□□□ -0.52
Trim28-201ENSMUST00000005705 Gm5089A1L3C8 106 aa11.79□□□□□ -0.52
Trim28-201ENSMUST00000005705 Igkv4-62A0A0G2JDW9 117 aa11.79□□□□□ -0.52
Trim28-201ENSMUST00000005705 Gm3618D3Z4P5 127 aa11.78□□□□□ -0.52
Trim28-201ENSMUST00000005705 Ang3P97802 145 aa11.78□□□□□ -0.52
Trim28-201ENSMUST00000005705 AI854703Q8BIN3 203 aa11.78□□□□□ -0.52
Trim28-201ENSMUST00000005705 Gm2916Q9D9B9 127 aa11.78□□□□□ -0.52
Trim28-201ENSMUST00000005705 Mast4Q811L6 2618 aa11.78□□□□□ -0.52
Trim28-201ENSMUST00000005705 A930009A15RikG3UYI6 118 aa11.77□□□□□ -0.52
Trim28-201ENSMUST00000005705 Trav9d-3A0A075B695 113 aa11.77□□□□□ -0.53
Trim28-201ENSMUST00000005705 Fhl2O70433 279 aa11.77□□□□□ -0.53
Trim28-201ENSMUST00000005705 Ccl21aP84444 133 aa11.77□□□□□ -0.53
Trim28-201ENSMUST00000005705 Ccl21bP86792 133 aa11.77□□□□□ -0.53
Trim28-201ENSMUST00000005705 Ccl21cP86793 133 aa11.77□□□□□ -0.53
Trim28-201ENSMUST00000005705 Col7a1Q63870 2944 aa11.77□□□□□ -0.53
Trim28-201ENSMUST00000005705 Tmem213Q08EA8 116 aa11.76□□□□□ -0.53
Trim28-201ENSMUST00000005705 CdsnQ7TPC1 561 aa11.76□□□□□ -0.53
Trim28-201ENSMUST00000005705 Atp5g1Q9CR84 136 aa11.75□□□□□ -0.53
Trim28-201ENSMUST00000005705 Prelid3aQ8VE85 172 aa11.75□□□□□ -0.53
Trim28-201ENSMUST00000005705 Phpt1Q9DAK9 124 aa11.75□□□□□ -0.53
Trim28-201ENSMUST00000005705 Ighv1-5A0A0A6YWG2 117 aa11.74□□□□□ -0.53
Trim28-201ENSMUST00000005705 Gm9887F6RFI0 207 aa11.74□□□□□ -0.53
Trim28-201ENSMUST00000005705 Fgf23Q9EPC2 251 aa11.74□□□□□ -0.53
Trim28-201ENSMUST00000005705 P01738 130 aa11.74□□□□□ -0.53
Trim28-201ENSMUST00000005705 Cox6cQ9CPQ1 76 aa11.74□□□□□ -0.53
Trim28-201ENSMUST00000005705 Gm6793B2RXM2 351 aa11.73□□□□□ -0.53
Trim28-201ENSMUST00000005705 Ly6gP35461 111 aa11.73□□□□□ -0.53
Trim28-201ENSMUST00000005705 Pfn2Q9JJV2 140 aa11.73□□□□□ -0.53
Trim28-201ENSMUST00000005705 4930432M17RikQ3V0W9 174 aa11.73□□□□□ -0.53
Trim28-201ENSMUST00000005705 Hivep1Q03172 2688 aa11.73□□□□□ -0.53
Trim28-201ENSMUST00000005705 CenpwQ3URR0 86 aa11.73□□□□□ -0.53
Trim28-201ENSMUST00000005705 Gm9936Q8C864 160 aa11.73□□□□□ -0.53
Trim28-201ENSMUST00000005705 Ly6hQ9WUC3 139 aa11.73□□□□□ -0.53
Trim28-201ENSMUST00000005705 Stab1Q8R4Y4 2571 aa11.73□□□□□ -0.53
Trim28-201ENSMUST00000005705 SmcpP15265 143 aa11.72□□□□□ -0.53
Trim28-201ENSMUST00000005705 Igkv4-78A0A0A6YYE5 119 aa11.72□□□□□ -0.53
Trim28-201ENSMUST00000005705 P01729 129 aa11.72□□□□□ -0.53
Trim28-201ENSMUST00000005705 Atp5eP56382 52 aa11.72□□□□□ -0.53
Trim28-201ENSMUST00000005705 Ucn2Q99ML8 113 aa11.72□□□□□ -0.53
Trim28-201ENSMUST00000005705 P01786 117 aa11.71□□□□□ -0.53
Trim28-201ENSMUST00000005705 Prss58Q8BW11 241 aa11.71□□□□□ -0.53
Trim28-201ENSMUST00000005705 Trav13-4-dv7A0A075B6C2 110 aa11.71□□□□□ -0.53
Trim28-201ENSMUST00000005705 H1fxQ80ZM5 188 aa11.71□□□□□ -0.53
Trim28-201ENSMUST00000005705 Tmem101Q91VP7 257 aa11.71□□□□□ -0.53
Trim28-201ENSMUST00000005705 Nop10Q9CQS2 64 aa11.71□□□□□ -0.53
Trim28-201ENSMUST00000005705 Gm9747Q810H1 104 aa11.71□□□□□ -0.54
Trim28-201ENSMUST00000005705 Pglyrp4Q0VB07 374 aa11.7□□□□□ -0.54
Trim28-201ENSMUST00000005705 3110070M22RikQ9DAQ7 118 aa11.7□□□□□ -0.54
Trim28-201ENSMUST00000005705 Zfp951A0A087WRH0 451 aa11.69□□□□□ -0.54
Trim28-201ENSMUST00000005705 GalmQ8K157 342 aa11.69□□□□□ -0.54
Trim28-201ENSMUST00000005705 Trbv30A0A0B4J1P1 111 aa11.69□□□□□ -0.54
Trim28-201ENSMUST00000005705 Defa7P50705 93 aa11.69□□□□□ -0.54
Trim28-201ENSMUST00000005705 Nbeal2Q6ZQA0 2742 aa11.69□□□□□ -0.54
Trim28-201ENSMUST00000005705 P01823 113 aa11.68□□□□□ -0.54
Trim28-201ENSMUST00000005705 Bri3P28662 125 aa11.68□□□□□ -0.54
Trim28-201ENSMUST00000005705 Crlf1Q9JM58 425 aa11.68□□□□□ -0.54
Trim28-201ENSMUST00000005705 PolqQ8CGS6 2544 aa11.68□□□□□ -0.54
Trim28-201ENSMUST00000005705 Trav9d-4A0A0G2JG37 103 aa11.68□□□□□ -0.54
Trim28-201ENSMUST00000005705 Ifitm1Q9D103 106 aa11.68□□□□□ -0.54
Trim28-201ENSMUST00000005705 Psmb8P28063 276 aa11.67□□□□□ -0.54
Trim28-201ENSMUST00000005705 ScxQ64124 207 aa11.67□□□□□ -0.54
Trim28-201ENSMUST00000005705 Tomm7Q9D173 55 aa11.67□□□□□ -0.54
Trim28-201ENSMUST00000005705 Gm7075D3Z497 112 aa11.67□□□□□ -0.54
Trim28-201ENSMUST00000005705 Defa20Q45VN2 95 aa11.67□□□□□ -0.54
Trim28-201ENSMUST00000005705 Gm9922Q8C3P1 144 aa11.67□□□□□ -0.54
Trim28-201ENSMUST00000005705 Ighv1-63A0A075B5X2 117 aa11.67□□□□□ -0.54
Trim28-201ENSMUST00000005705 Ighv2-6-8A0A0A6YWY9 116 aa11.67□□□□□ -0.54
Trim28-201ENSMUST00000005705 B230359F08RikA0A0B4J1K3 109 aa11.67□□□□□ -0.54
Trim28-201ENSMUST00000005705 BsnO88737 3942 aa11.67□□□□□ -0.54
Trim28-201ENSMUST00000005705 Cox7a1P56392 80 aa11.66□□□□□ -0.54
Trim28-201ENSMUST00000005705 CirbpP60824 172 aaKnown RBP11.66□□□□□ -0.54
Trim28-201ENSMUST00000005705 Defa21Q8C1P2 93 aa11.66□□□□□ -0.54
Trim28-201ENSMUST00000005705 CicQ924A2 2510 aa11.66□□□□□ -0.54
Trim28-201ENSMUST00000005705 Dand5Q76LW6 185 aa11.66□□□□□ -0.54
Trim28-201ENSMUST00000005705 Gm11565A2A4M7 156 aa11.65□□□□□ -0.54
Trim28-201ENSMUST00000005705 Znf580Q9DB38 172 aa11.65□□□□□ -0.54
Trim28-201ENSMUST00000005705 Esm1Q9QYY7 184 aa11.65□□□□□ -0.54
Trim28-201ENSMUST00000005705 P06329 120 aa11.64□□□□□ -0.55
Trim28-201ENSMUST00000005705 TeppQ6IMH0 216 aa11.64□□□□□ -0.55
Trim28-201ENSMUST00000005705 Shisa2Q8QZV2 295 aa11.64□□□□□ -0.55
Trim28-201ENSMUST00000005705 Krtap26-1Q9D7N2 215 aa11.64□□□□□ -0.55
Trim28-201ENSMUST00000005705 Ank2Q8C8R3 3898 aa11.63□□□□□ -0.55
Trim28-201ENSMUST00000005705 Ighv5-9-1A0A0A6YVS4 126 aa11.63□□□□□ -0.55
Trim28-201ENSMUST00000005705 Ighv1-11A0A0A6YWI9 117 aa11.63□□□□□ -0.55
Trim28-201ENSMUST00000005705 Ighv1-49A0A0A6YWX2 117 aa11.63□□□□□ -0.55
Trim28-201ENSMUST00000005705 Eif4ebp1Q60876 117 aa11.63□□□□□ -0.55
Trim28-201ENSMUST00000005705 Defb29Q8BGW9 78 aa11.63□□□□□ -0.55
Trim28-201ENSMUST00000005705 Gm10509O88255 85 aa11.63□□□□□ -0.55
Trim28-201ENSMUST00000005705 SelenowP63300 88 aa11.63□□□□□ -0.55
Trim28-201ENSMUST00000005705 4930564D02RikQ9D4S4 103 aa11.63□□□□□ -0.55
Trim28-201ENSMUST00000005705 Igkv4-79A0A075B5L8 119 aa11.62□□□□□ -0.55
Trim28-201ENSMUST00000005705 Trav14d-3-dv8A0A075B619 120 aa11.62□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms