RNA–Protein interactions for RNA: ENSMUST00000202945.3

Ube3a-216, Transcript of Ubiquitin-protein ligase E3A, mousemouse

TSL 1 (best) BASIC

Gene Ube3a, Length 3,889 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3a-216ENSMUST00000202945 Gm17732E9Q5I2 61 aa10.05□□□□□ -0.8
Ube3a-216ENSMUST00000202945 BB014433Q8C5R5 389 aa10.05□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Naa38Q9D2U5 125 aa10.05□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Ighv1-82A0A0G2JEU7 117 aa10.05□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Odf1Q61999 247 aa10.05□□□□□ -0.8
Ube3a-216ENSMUST00000202945 P01750 117 aa10.05□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Egr2P08152 470 aa10.05□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Epg5Q80TA9 2572 aa10.04□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Gm5878E9PUB3 99 aa10.04□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Pglyrp4Q0VB07 374 aa10.04□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Ndufa4l2Q4FZG9 87 aa10.04□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Mrpl35Q9CQL6 188 aa10.04□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Dnal4Q9DCM4 105 aa10.04□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Hbb-b2P02089 147 aa10.04□□□□□ -0.8
Ube3a-216ENSMUST00000202945 CirbpP60824 172 aaKnown RBP10.04□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Smrp1Q2MH31 260 aa10.04□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Gm10295Q8CCF3 114 aa10.04□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Gm5089A1L3C8 106 aa10.03□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Gm10135F6TEE5 83 aa10.03□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Spink1P09036 80 aa10.03□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Gm21748Q3UE70 102 aa10.03□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Igkv4-70A0A0B4J1I5 116 aa10.03□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Zfp462B1AWL2 2495 aaKnown RBP10.02□□□□□ -0.8
Ube3a-216ENSMUST00000202945 Ighv1-23A0A0A6YVW3 117 aa10.02□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Defb2P82020 71 aa10.02□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Igkv4-71A0A0G2JEH0 117 aa10.02□□□□□ -0.81
Ube3a-216ENSMUST00000202945 P01747 120 aa10.02□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Usp9yF8VPU6 2556 aa10.02□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Gm11565A2A4M7 156 aa10.02□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Dynlrb2Q9DAJ5 96 aa10.02□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Ighv1-64A0A075B5X3 117 aa10.01□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Defb29Q8BGW9 78 aa10.01□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Mpv17l2Q8VIK2 200 aa10.01□□□□□ -0.81
Ube3a-216ENSMUST00000202945 RhohQ9D3G9 191 aa10.01□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Mapk1ip1lQ8BH93 242 aa10□□□□□ -0.81
Ube3a-216ENSMUST00000202945 1520401A03RikA0A0J9YVH6 598 aa10□□□□□ -0.81
Ube3a-216ENSMUST00000202945 9430069I07RikQ9CX21 111 aa10□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Pfn2Q9JJV2 140 aa10□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Trav9-2A0A075B647 113 aa10□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Ighv1-12A0A0A6YXJ9 117 aa10□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Trav9-4A0A0B4J1K2 113 aa10□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Ighv1-50A0A075B5W1 117 aa9.99□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Trav4n-4A0A075B615 110 aa9.99□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Igf1P05017 153 aa9.99□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Fam19a4Q7TPG5 135 aa9.99□□□□□ -0.81
Ube3a-216ENSMUST00000202945 B230307C23RikQ8BLB2 64 aa9.99□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Cep192E9Q4Y4 2514 aaKnown RBP9.99□□□□□ -0.81
Ube3a-216ENSMUST00000202945 TshbP12656 138 aa9.99□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Xcl1P47993 114 aa9.99□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Q8R092 253 aa9.99□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Brk1Q91VR8 75 aa9.99□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Tmem243B2RVB9 118 aa9.99□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Ighv2-7A0A075B5Q8 116 aa9.98□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Igfn1Q3KNY0 2849 aa9.98□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Tmem14cQ9CQN6 114 aa9.98□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Q9D8Q6 235 aa9.98□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Phlda3Q9WV95 125 aa9.98□□□□□ -0.81
Ube3a-216ENSMUST00000202945 CubnQ9JLB4 3623 aa9.98□□□□□ -0.81
Ube3a-216ENSMUST00000202945 4930432M17RikQ3V0W9 174 aa9.98□□□□□ -0.81
Ube3a-216ENSMUST00000202945 LhbO09108 141 aa9.97□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Wfdc15aQ8BH89 80 aa9.97□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Setd2E9Q5F9 2537 aa9.97□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Ighv1-52A0A0A6YXC3 117 aa9.97□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Defb26Q30KN7 186 aa9.97□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Smim26Q3V460 107 aa9.97□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Defa27F2Z403 93 aa9.97□□□□□ -0.81
Ube3a-216ENSMUST00000202945 CdsnQ7TPC1 561 aa9.97□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Dand5Q76LW6 185 aa9.96□□□□□ -0.81
Ube3a-216ENSMUST00000202945 MplkipQ9D011 178 aa9.96□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Tenm3Q9WTS6 2715 aa9.96□□□□□ -0.81
Ube3a-216ENSMUST00000202945 Snrpd3P62320 126 aaKnown RBP9.96□□□□□ -0.82
Ube3a-216ENSMUST00000202945 Atp5g1Q9CR84 136 aa9.96□□□□□ -0.82
Ube3a-216ENSMUST00000202945 Ube2d1P61080 147 aaKnown RBP9.96□□□□□ -0.82
Ube3a-216ENSMUST00000202945 Prelid3aQ8VE85 172 aa9.96□□□□□ -0.82
Ube3a-216ENSMUST00000202945 Trav13n-1A0A0G2JEU8 110 aa9.95□□□□□ -0.82
Ube3a-216ENSMUST00000202945 Glrp1E9Q9S8 174 aa9.95□□□□□ -0.82
Ube3a-216ENSMUST00000202945 Gm5629P06327 117 aa9.95□□□□□ -0.82
Ube3a-216ENSMUST00000202945 Srsf2Q62093 221 aaKnown RBP9.95□□□□□ -0.82
Ube3a-216ENSMUST00000202945 Trav14d-3-dv8A0A075B619 120 aa9.95□□□□□ -0.82
Ube3a-216ENSMUST00000202945 Hivep3A2A884 2348 aa9.95□□□□□ -0.82
Ube3a-216ENSMUST00000202945 Ube2d3P61079 147 aa9.94□□□□□ -0.82
Ube3a-216ENSMUST00000202945 Ube2d2P62838 147 aa9.94□□□□□ -0.82
Ube3a-216ENSMUST00000202945 Igkv4-74A0A0B4J1I3 119 aa9.94□□□□□ -0.82
Ube3a-216ENSMUST00000202945 Q9DAB9 146 aa9.94□□□□□ -0.82
Ube3a-216ENSMUST00000202945 P06328 117 aa9.93□□□□□ -0.82
Ube3a-216ENSMUST00000202945 Mrpl55Q9CZ83 127 aa9.93□□□□□ -0.82
Ube3a-216ENSMUST00000202945 Ang3P97802 145 aa9.93□□□□□ -0.82
Ube3a-216ENSMUST00000202945 Ighv2-3A0A075B696 115 aa9.92□□□□□ -0.82
Ube3a-216ENSMUST00000202945 Igkv4-69A0A0B4J1I6 116 aa9.92□□□□□ -0.82
Ube3a-216ENSMUST00000202945 1810032O08RikE9PZV8 113 aa9.92□□□□□ -0.82
Ube3a-216ENSMUST00000202945 Igkv1-35A0A0G2JDE5 120 aa9.92□□□□□ -0.82
Ube3a-216ENSMUST00000202945 Apoc4Q61268 124 aa9.92□□□□□ -0.82
Ube3a-216ENSMUST00000202945 Ndufb4Q9CQC7 129 aa9.92□□□□□ -0.82
Ube3a-216ENSMUST00000202945 Trav4d-3A0A075B625 110 aa9.92□□□□□ -0.82
Ube3a-216ENSMUST00000202945 Atp5eP56382 52 aa9.92□□□□□ -0.82
Ube3a-216ENSMUST00000202945 4930535I16RikQ9CUI2 172 aa9.92□□□□□ -0.82
Ube3a-216ENSMUST00000202945 LeprotO89013 131 aa9.91□□□□□ -0.82
Ube3a-216ENSMUST00000202945 CnfnQ6PCW6 111 aa9.91□□□□□ -0.82
Ube3a-216ENSMUST00000202945 PolqQ8CGS6 2544 aa9.91□□□□□ -0.82
Ube3a-216ENSMUST00000202945 H1fxQ80ZM5 188 aa9.91□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 71.5 ms