RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Pde6gP09174 87 aa10.37□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Trav14d-3-dv8A0A075B619 120 aa10.37□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Igkv8-16A0A0G2JDG9 121 aa10.37□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 SvipQ3UZP4 77 aa10.37□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Zc2hc1bQ9D534 172 aa10.37□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Smim1P0C8K7 78 aa10.36□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Gm9747Q810H1 104 aa10.36□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Gm8439G3UWA7 96 aa10.36□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Ttc28Q80XJ3 2450 aa10.35□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Gm20726G3UX18 150 aa10.35□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Ndufc1Q9CQY9 76 aa10.35□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Ndufs7Q9DC70 224 aa10.35□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 E130218I03RikA0A0U1RNU5 63 aa10.35□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Trbv13-1A0A0B4J1P8 112 aa10.35□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Pou2af1Q64693 256 aa10.35□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Ighv1-85A0A075B5Y6 117 aa10.35□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Q9DAQ5 155 aa10.35□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 BC067074F6RXI4 2391 aa10.34□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Kiaa1549Q68FD9 1940 aa10.34□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Notch3Q61982 2318 aa10.34□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Tanc2A2A690 1994 aa10.34□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Pla2g2eQ9QUL3 142 aa10.34□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Ppp1r32Q148A4 427 aa10.33□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 Ormdl1Q921I0 153 aa10.33□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 Gm42715A0A087WP63 3095 aaKnown RBP10.33□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 Ighv2-6-8A0A0A6YWY9 116 aa10.33□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 Igkv4-61A0A0G2JH00 117 aa10.33□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 Brwd1Q921C3 2304 aa10.32□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 Gm4861Q8C5A4 106 aa10.32□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 Gm26566Q8CAC1 153 aa10.32□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 Igf1P05017 153 aa10.32□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 Cox7a1P56392 80 aa10.31□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 Igkv4-59A0A0B4J1I8 117 aa10.31□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 P18527 97 aa10.31□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 SbsponQ3UPR9 264 aa10.31□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 Q9D8Q6 235 aa10.31□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 Igkv4-74A0A0B4J1I3 119 aa10.31□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 PrcdQ00LT2 53 aa10.31□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 Tmem223Q9CQE2 199 aaKnown RBP10.31□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 AcanQ61282 2132 aaKnown RBP10.3□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 OdaphJ3QNT8 126 aa10.3□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 Fhl2O70433 279 aa10.3□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 Fam222aQ6PGH4 453 aa10.3□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 Ly6c2P0CW03 131 aa10.3□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 Cd27P41272 250 aa10.3□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 Tcl1b3P56842 122 aa10.3□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 P84751 237 aa10.29□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 Fgfbp3Q1HCM0 245 aa10.29□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 Wdr38Q9D994 303 aa10.29□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 Igkv4-54A0A0G2JES9 117 aa10.29□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 Ang3P97802 145 aa10.29□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 Ankhd1E9PUR0 2548 aaKnown RBP10.28□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 P01747 120 aa10.28□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 Arid1bE9Q4N7 2244 aa10.28□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 Crlf1Q9JM58 425 aa10.28□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 Klk11Q9QYN3 276 aa10.27□□□□□ -0.76
Pcdha1-202ENSMUST00000193839 Ighv1-66A0A075B5X5 117 aa10.27□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 Spink8Q09TK9 105 aa10.27□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 PcntP48725 2898 aa10.27□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 Igkv4-72A0A0B4J1I4 117 aa10.27□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 FshbQ60687 130 aa10.27□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 Vpreb2P13373 142 aa10.26□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 MifP34884 115 aaKnown RBP10.26□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 E130114P18RikF6S0S7 154 aa10.26□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 Brk1Q91VR8 75 aa10.26□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 Ep400Q8CHI8 3072 aaKnown RBP10.26□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 Ighv3-3A0A0A6YWL2 116 aa10.26□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 FcorP0DJI6 106 aa10.26□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 Gm1968Q3T9I3 115 aa10.26□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 Usp9xP70398 2559 aaKnown RBP10.26□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 Myo9aQ8C170 2542 aa10.25□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 Trav13n-1A0A0G2JEU8 110 aa10.25□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 Ube2d1P61080 147 aaKnown RBP10.25□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 Smrp1Q2MH31 260 aa10.25□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 Igkv4-69A0A0B4J1I6 116 aa10.24□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 Prr9Q8BV84 116 aa10.24□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 TrrapQ80YV3 2565 aaKnown RBP10.23□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 Trav13d-1A0A075B606 110 aa10.23□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 Gm9767G3X930 207 aa10.23□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 Ly6gP35461 111 aa10.23□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 Polr2kQ63871 58 aa10.23□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 Gm12057A0A087WR21 115 aa10.23□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 Ighv13-2A0A0A6YWN3 119 aa10.23□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 Higd2aQ9CQJ1 106 aa10.22□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 Gm10322F7D7I4 111 aa10.22□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 Ighv1-5A0A0A6YWG2 117 aa10.22□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 Ube2d3P61079 147 aa10.22□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 Ube2d2P62838 147 aa10.22□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 Spry2Q9QXV8 315 aa10.22□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 Sox16Q62247 57 aa10.21□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 Mrpl52Q9D0Y8 121 aa10.21□□□□□ -0.77
Pcdha1-202ENSMUST00000193839 Igkv4-78A0A0A6YYE5 119 aa10.21□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 Igkv4-79A0A075B5L8 119 aa10.21□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 Gm12353A2AGJ4 60 aa10.21□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 TshbP12656 138 aa10.21□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 Serp2Q6TAW2 65 aa10.21□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 Chchd7Q8K2Q5 85 aa10.2□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 Tm2d2Q8R0I4 213 aa10.2□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 LhbO09108 141 aa10.19□□□□□ -0.78
Pcdha1-202ENSMUST00000193839 Gata1P17679 413 aa10.19□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 73.4 ms