RNA–Protein interactions for RNA: ENSMUST00000111051.9

Bdnf-210, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,125 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-210ENSMUST00000111051 Igkv4-69A0A0B4J1I6 116 aa6.22□□□□□ -1.41
Bdnf-210ENSMUST00000111051 Gatd1Q8BFQ8 220 aa6.22□□□□□ -1.41
Bdnf-210ENSMUST00000111051 Spink12Q9D256 87 aa6.22□□□□□ -1.41
Bdnf-210ENSMUST00000111051 Q8R092 253 aa6.21□□□□□ -1.41
Bdnf-210ENSMUST00000111051 Pfn2Q9JJV2 140 aa6.21□□□□□ -1.41
Bdnf-210ENSMUST00000111051 Trav9d-4A0A0G2JG37 103 aa6.21□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Gm20726G3UX18 150 aa6.21□□□□□ -1.42
Bdnf-210ENSMUST00000111051 MsmbO08540 113 aa6.21□□□□□ -1.42
Bdnf-210ENSMUST00000111051 BC025920Q3US60 128 aa6.21□□□□□ -1.42
Bdnf-210ENSMUST00000111051 PemtQ61907 199 aa6.21□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Ndufa12Q7TMF3 145 aaKnown RBP6.21□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Ighv1-61P01749 117 aa6.2□□□□□ -1.42
Bdnf-210ENSMUST00000111051 PlaurP35456 327 aa6.2□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Ang3P97802 145 aa6.2□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Defb45Q3V490 66 aa6.2□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Prune2Q52KR3 3084 aa6.2□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Gm3285A0A1W2P7U0 201 aa6.2□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Rpl35aO55142 110 aa6.2□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Fxyd5P97808 178 aa6.19□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Smim26Q3V460 107 aa6.19□□□□□ -1.42
Bdnf-210ENSMUST00000111051 FshbQ60687 130 aa6.19□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Trav13n-1A0A0G2JEU8 110 aa6.19□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Atp5g3P56384 141 aa6.19□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Rps28P62858 69 aaKnown RBP6.19□□□□□ -1.42
Bdnf-210ENSMUST00000111051 4930564D02RikQ9D4S4 103 aa6.19□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Rev3lQ61493 3122 aa6.19□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Gm7102J3QQ10 178 aa6.19□□□□□ -1.42
Bdnf-210ENSMUST00000111051 4930470P17RikQ9D542 155 aa6.19□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Znf580Q9DB38 172 aa6.19□□□□□ -1.42
Bdnf-210ENSMUST00000111051 NbasE9Q411 2356 aa6.19□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Ttc28Q80XJ3 2450 aa6.19□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Gm10322F7D7I4 111 aa6.18□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Atp5g1Q9CR84 136 aa6.18□□□□□ -1.42
Bdnf-210ENSMUST00000111051 AspmQ8CJ27 3122 aa6.18□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Spg11Q3UHA3 2430 aa6.18□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Gm21748Q3UE70 102 aa6.18□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Cmc4Q61908 68 aa6.18□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Gm10542F6XDR3 90 aa6.18□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Nop10Q9CQS2 64 aa6.18□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Gm3618D3Z4P5 127 aa6.18□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Krtap27-1E9PX37 202 aa6.18□□□□□ -1.42
Bdnf-210ENSMUST00000111051 9430069I07RikQ9CX21 111 aa6.18□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Gm2916Q9D9B9 127 aa6.18□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Igkv4-62A0A0G2JDW9 117 aa6.17□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Gm9925F6T2U3 160 aa6.17□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Gm10490F6VBM2 120 aa6.17□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Defa7P50705 93 aa6.17□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Acyp1P56376 99 aa6.17□□□□□ -1.42
Bdnf-210ENSMUST00000111051 P84751 237 aa6.17□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Defb29Q8BGW9 78 aa6.17□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Gata1P17679 413 aa6.17□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Defb26Q30KN7 186 aa6.17□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Defb18Q30KP5 85 aa6.17□□□□□ -1.42
Bdnf-210ENSMUST00000111051 CenpwQ3URR0 86 aa6.17□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Trav9d-3A0A075B695 113 aa6.17□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Zfp951A0A087WRH0 451 aa6.17□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Gm10337F7DEP7 55 aa6.17□□□□□ -1.42
Bdnf-210ENSMUST00000111051 AngP21570 145 aa6.17□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Ucn2Q99ML8 113 aa6.17□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Zfhx3Q61329 3726 aa6.17□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Lrrk2Q5S006 2527 aa6.16□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Fhl2O70433 279 aa6.16□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Hist1h4aP62806 103 aaKnown RBP6.16□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Lyrm9Q3UN90 78 aa6.16□□□□□ -1.42
Bdnf-210ENSMUST00000111051 ScxQ64124 207 aa6.16□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Trav11A0A0B4J1J9 114 aa6.16□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Gm10509O88255 85 aa6.16□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Igkv6-13A0A0G2JGY3 119 aa6.15□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Mapk1ip1lQ8BH93 242 aa6.15□□□□□ -1.42
Bdnf-210ENSMUST00000111051 NpwA0A1L1STR8 176 aa6.15□□□□□ -1.42
Bdnf-210ENSMUST00000111051 SbsponQ3UPR9 264 aa6.15□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Vmo1Q5SXG7 201 aa6.15□□□□□ -1.42
Bdnf-210ENSMUST00000111051 Igkv1-99F6XWB2 120 aa6.15□□□□□ -1.43
Bdnf-210ENSMUST00000111051 Fam19a5Q91WE9 132 aa6.14□□□□□ -1.43
Bdnf-210ENSMUST00000111051 Prp2P05143 317 aa6.14□□□□□ -1.43
Bdnf-210ENSMUST00000111051 Tmem258P61166 79 aa6.14□□□□□ -1.43
Bdnf-210ENSMUST00000111051 H2al1aQ5M8Q2 105 aa6.14□□□□□ -1.43
Bdnf-210ENSMUST00000111051 Gm17472A0A075B683 117 aa6.14□□□□□ -1.43
Bdnf-210ENSMUST00000111051 P01823 113 aa6.14□□□□□ -1.43
Bdnf-210ENSMUST00000111051 Fam110dQ80X91 271 aa6.14□□□□□ -1.43
Bdnf-210ENSMUST00000111051 Ly6hQ9WUC3 139 aa6.14□□□□□ -1.43
Bdnf-210ENSMUST00000111051 9430015G10RikA2ASP7 199 aa6.14□□□□□ -1.43
Bdnf-210ENSMUST00000111051 Gm10135F6TEE5 83 aa6.14□□□□□ -1.43
Bdnf-210ENSMUST00000111051 GfyJ3KML8 504 aa6.14□□□□□ -1.43
Bdnf-210ENSMUST00000111051 Defa20Q45VN2 95 aa6.14□□□□□ -1.43
Bdnf-210ENSMUST00000111051 A830031A19RikQ8BNT5 113 aa6.14□□□□□ -1.43
Bdnf-210ENSMUST00000111051 BC067074F6RXI4 2391 aa6.13□□□□□ -1.43
Bdnf-210ENSMUST00000111051 Brwd1Q921C3 2304 aa6.13□□□□□ -1.43
Bdnf-210ENSMUST00000111051 Ighv1-62-1A0A075B5U3 116 aa6.13□□□□□ -1.43
Bdnf-210ENSMUST00000111051 4930432M17RikQ3V0W9 174 aa6.13□□□□□ -1.43
Bdnf-210ENSMUST00000111051 Zc2hc1bQ9D534 172 aa6.13□□□□□ -1.43
Bdnf-210ENSMUST00000111051 Crip2Q9DCT8 208 aaKnown RBP6.13□□□□□ -1.43
Bdnf-210ENSMUST00000111051 Usp9xP70398 2559 aaKnown RBP6.13□□□□□ -1.43
Bdnf-210ENSMUST00000111051 Cox6b1P56391 86 aaKnown RBP6.13□□□□□ -1.43
Bdnf-210ENSMUST00000111051 Defa21Q8C1P2 93 aa6.13□□□□□ -1.43
Bdnf-210ENSMUST00000111051 Gm7257D3YX25 99 aa6.12□□□□□ -1.43
Bdnf-210ENSMUST00000111051 P06329 120 aa6.12□□□□□ -1.43
Bdnf-210ENSMUST00000111051 Cox7a1P56392 80 aa6.12□□□□□ -1.43
Bdnf-210ENSMUST00000111051 B230217C12RikE9Q3Z1 139 aa6.12□□□□□ -1.43
Bdnf-210ENSMUST00000111051 NrgnP60761 78 aa6.12□□□□□ -1.43
Retrieved 100 of 22,080 RNA–protein pairs in 36.7 ms