RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Gm6793B2RXM2 351 aa13.44□□□□□ -0.26
Trim47-202ENSMUST00000106441 LeprotO89013 131 aa13.44□□□□□ -0.26
Trim47-202ENSMUST00000106441 Wfdc15aQ8BH89 80 aa13.44□□□□□ -0.26
Trim47-202ENSMUST00000106441 Ifitm1Q9D103 106 aa13.44□□□□□ -0.26
Trim47-202ENSMUST00000106441 Fn1P11276 2477 aaKnown RBP13.44□□□□□ -0.26
Trim47-202ENSMUST00000106441 FcorP0DJI6 106 aa13.43□□□□□ -0.26
Trim47-202ENSMUST00000106441 Prr13Q9CQJ5 137 aa13.43□□□□□ -0.26
Trim47-202ENSMUST00000106441 4930564D02RikQ9D4S4 103 aa13.43□□□□□ -0.26
Trim47-202ENSMUST00000106441 Trbv17A0A140T8P8 114 aa13.42□□□□□ -0.26
Trim47-202ENSMUST00000106441 Krtap27-1E9PX37 202 aa13.42□□□□□ -0.26
Trim47-202ENSMUST00000106441 Gm8439G3UWA7 96 aa13.42□□□□□ -0.26
Trim47-202ENSMUST00000106441 TtrP07309 147 aa13.42□□□□□ -0.26
Trim47-202ENSMUST00000106441 Prr3Q811B5 190 aaKnown RBP13.42□□□□□ -0.26
Trim47-202ENSMUST00000106441 Ighv2-3A0A075B696 115 aa13.42□□□□□ -0.26
Trim47-202ENSMUST00000106441 Esp24A8R0V6 68 aa13.42□□□□□ -0.26
Trim47-202ENSMUST00000106441 MsmbO08540 113 aa13.42□□□□□ -0.26
Trim47-202ENSMUST00000106441 Hoxd3P09027 433 aa13.42□□□□□ -0.26
Trim47-202ENSMUST00000106441 Morn5Q9DAI9 170 aa13.42□□□□□ -0.26
Trim47-202ENSMUST00000106441 Ankrd39Q9D2X0 183 aa13.41□□□□□ -0.26
Trim47-202ENSMUST00000106441 Rab37Q9JKM7 223 aa13.41□□□□□ -0.26
Trim47-202ENSMUST00000106441 Gm10553J3QPF1 123 aa13.4□□□□□ -0.26
Trim47-202ENSMUST00000106441 Rnase1P00683 149 aa13.4□□□□□ -0.26
Trim47-202ENSMUST00000106441 Ifi27l2aQ8R412 90 aa13.4□□□□□ -0.26
Trim47-202ENSMUST00000106441 Mpv17l2Q8VIK2 200 aa13.39□□□□□ -0.27
Trim47-202ENSMUST00000106441 Rpl32-psP17932 135 aa13.39□□□□□ -0.27
Trim47-202ENSMUST00000106441 Nsd1O88491 2588 aaKnown RBP13.38□□□□□ -0.27
Trim47-202ENSMUST00000106441 Ighv5-9-1A0A0A6YVS4 126 aa13.38□□□□□ -0.27
Trim47-202ENSMUST00000106441 Psmb8P28063 276 aa13.38□□□□□ -0.27
Trim47-202ENSMUST00000106441 AI854703Q8BIN3 203 aa13.38□□□□□ -0.27
Trim47-202ENSMUST00000106441 Ube2e2Q91W82 201 aa13.38□□□□□ -0.27
Trim47-202ENSMUST00000106441 Scgb1b2O35176 93 aa13.38□□□□□ -0.27
Trim47-202ENSMUST00000106441 Dynlrb2Q9DAJ5 96 aa13.38□□□□□ -0.27
Trim47-202ENSMUST00000106441 Ighv2-7A0A075B5Q8 116 aa13.37□□□□□ -0.27
Trim47-202ENSMUST00000106441 Tmem263Q9DAM7 115 aa13.37□□□□□ -0.27
Trim47-202ENSMUST00000106441 Ighv2-6-8A0A0A6YWY9 116 aa13.37□□□□□ -0.27
Trim47-202ENSMUST00000106441 C920008G01RikA0A0B4J1N1 112 aa13.37□□□□□ -0.27
Trim47-202ENSMUST00000106441 P01753 117 aa13.37□□□□□ -0.27
Trim47-202ENSMUST00000106441 Ifitm10Q8BR26 201 aa13.37□□□□□ -0.27
Trim47-202ENSMUST00000106441 Mrpl35Q9CQL6 188 aa13.37□□□□□ -0.27
Trim47-202ENSMUST00000106441 Nhlrc1Q8BR37 401 aa13.35□□□□□ -0.27
Trim47-202ENSMUST00000106441 Gm9936Q8C864 160 aa13.35□□□□□ -0.27
Trim47-202ENSMUST00000106441 Defb10Q8R2I8 73 aa13.35□□□□□ -0.27
Trim47-202ENSMUST00000106441 Q9DAQ5 155 aa13.35□□□□□ -0.27
Trim47-202ENSMUST00000106441 Xirp2Q4U4S6 3784 aa13.35□□□□□ -0.27
Trim47-202ENSMUST00000106441 Sorl1O88307 2215 aaKnown RBP13.35□□□□□ -0.27
Trim47-202ENSMUST00000106441 Gm10135F6TEE5 83 aa13.34□□□□□ -0.27
Trim47-202ENSMUST00000106441 Atp5eP56382 52 aa13.34□□□□□ -0.27
Trim47-202ENSMUST00000106441 Morn3Q8C5T4 241 aa13.34□□□□□ -0.27
Trim47-202ENSMUST00000106441 Crip2Q9DCT8 208 aaKnown RBP13.34□□□□□ -0.27
Trim47-202ENSMUST00000106441 Gm28539A0A087WSL9 92 aa13.34□□□□□ -0.27
Trim47-202ENSMUST00000106441 1810032O08RikE9PZV8 113 aa13.34□□□□□ -0.27
Trim47-202ENSMUST00000106441 March3Q8BRX9 218 aa13.34□□□□□ -0.27
Trim47-202ENSMUST00000106441 Hivep1Q03172 2688 aa13.33□□□□□ -0.28
Trim47-202ENSMUST00000106441 Trav9-2A0A075B647 113 aa13.33□□□□□ -0.28
Trim47-202ENSMUST00000106441 Trav9-4A0A0B4J1K2 113 aa13.33□□□□□ -0.28
Trim47-202ENSMUST00000106441 Krtap24-1G3X9A2 248 aa13.33□□□□□ -0.28
Trim47-202ENSMUST00000106441 Cox17P56394 63 aa13.33□□□□□ -0.28
Trim47-202ENSMUST00000106441 Fam19a4Q7TPG5 135 aa13.33□□□□□ -0.28
Trim47-202ENSMUST00000106441 Gm35549A0A0N4SUS7 141 aa13.32□□□□□ -0.28
Trim47-202ENSMUST00000106441 Lect2O88803 151 aa13.32□□□□□ -0.28
Trim47-202ENSMUST00000106441 Cfap126Q6P8X9 189 aa13.32□□□□□ -0.28
Trim47-202ENSMUST00000106441 Gatd1Q8BFQ8 220 aa13.32□□□□□ -0.28
Trim47-202ENSMUST00000106441 BC106179Q8C9L1 186 aa13.32□□□□□ -0.28
Trim47-202ENSMUST00000106441 Xlr5cQ9JJR2 179 aa13.32□□□□□ -0.28
Trim47-202ENSMUST00000106441 Rnf183Q8QZS5 190 aa13.32□□□□□ -0.28
Trim47-202ENSMUST00000106441 4930442H23RikQ9D5G7 103 aa13.32□□□□□ -0.28
Trim47-202ENSMUST00000106441 Synj2bpQ9D6K5 145 aa13.31□□□□□ -0.28
Trim47-202ENSMUST00000106441 A930009A15RikG3UYI6 118 aa13.31□□□□□ -0.28
Trim47-202ENSMUST00000106441 P01811 117 aa13.31□□□□□ -0.28
Trim47-202ENSMUST00000106441 Trav7d-3Q5R1I1 112 aa13.3□□□□□ -0.28
Trim47-202ENSMUST00000106441 Spag11Q8K4N2 71 aa13.3□□□□□ -0.28
Trim47-202ENSMUST00000106441 3110070M22RikQ9DAQ7 118 aa13.3□□□□□ -0.28
Trim47-202ENSMUST00000106441 Mfap4Q9D1H9 257 aa13.3□□□□□ -0.28
Trim47-202ENSMUST00000106441 Gm29666A0A087WQ99 126 aa13.29□□□□□ -0.28
Trim47-202ENSMUST00000106441 Gm10490F6VBM2 120 aa13.29□□□□□ -0.28
Trim47-202ENSMUST00000106441 Gm10509O88255 85 aa13.29□□□□□ -0.28
Trim47-202ENSMUST00000106441 Cox6b1P56391 86 aaKnown RBP13.29□□□□□ -0.28
Trim47-202ENSMUST00000106441 P84751 237 aa13.29□□□□□ -0.28
Trim47-202ENSMUST00000106441 Fgfbp3Q1HCM0 245 aa13.29□□□□□ -0.28
Trim47-202ENSMUST00000106441 A530064D06RikQ8BNV8 229 aa13.28□□□□□ -0.28
Trim47-202ENSMUST00000106441 Lyrm7Q9DA03 104 aa13.28□□□□□ -0.28
Trim47-202ENSMUST00000106441 Defb47Q30KN1 79 aa13.28□□□□□ -0.28
Trim47-202ENSMUST00000106441 Esm1Q9QYY7 184 aa13.28□□□□□ -0.28
Trim47-202ENSMUST00000106441 Igkv4-68A0A0B4J1I7 117 aa13.27□□□□□ -0.28
Trim47-202ENSMUST00000106441 Gm867A0A1W2P7T4 151 aa13.27□□□□□ -0.28
Trim47-202ENSMUST00000106441 Fhl2O70433 279 aa13.27□□□□□ -0.28
Trim47-202ENSMUST00000106441 Ly6gP35461 111 aa13.27□□□□□ -0.28
Trim47-202ENSMUST00000106441 Gm21748Q3UE70 102 aa13.27□□□□□ -0.28
Trim47-202ENSMUST00000106441 Ucn2Q99ML8 113 aa13.27□□□□□ -0.28
Trim47-202ENSMUST00000106441 Ndufs7Q9DC70 224 aa13.27□□□□□ -0.28
Trim47-202ENSMUST00000106441 OdaphJ3QNT8 126 aa13.26□□□□□ -0.29
Trim47-202ENSMUST00000106441 Ube2wQ8VDW4 151 aa13.26□□□□□ -0.29
Trim47-202ENSMUST00000106441 2310009B15RikA0A0A6YWI4 143 aa13.25□□□□□ -0.29
Trim47-202ENSMUST00000106441 Gm11444F6QMA6 170 aa13.25□□□□□ -0.29
Trim47-202ENSMUST00000106441 Avpi1Q9D7H4 142 aa13.25□□□□□ -0.29
Trim47-202ENSMUST00000106441 Ighv1-11A0A0A6YWI9 117 aa13.24□□□□□ -0.29
Trim47-202ENSMUST00000106441 Gm10322F7D7I4 111 aa13.24□□□□□ -0.29
Trim47-202ENSMUST00000106441 Gata1P17679 413 aa13.24□□□□□ -0.29
Trim47-202ENSMUST00000106441 H1fxQ80ZM5 188 aa13.24□□□□□ -0.29
Trim47-202ENSMUST00000106441 BB014433Q8C5R5 389 aa13.24□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 32 ms