RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Ighv1-85A0A075B5Y6 117 aa11.83□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Gm28539A0A087WSL9 92 aa11.83□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Igkv2-109A0A075B5K6 120 aa11.83□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Timm17bQ9Z0V7 172 aa11.83□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Rpl39lQ9CQD0 51 aa11.82□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Gm17577J3QNF7 156 aa11.82□□□□□ -0.52
Clcn3-203ENSMUST00000093490 BikO70337 150 aa11.82□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Ighv8-5A0A0A6YY60 119 aa11.82□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Trav13n-2A0A0G2JF93 110 aa11.82□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Lypd6Q8BPP5 171 aa11.82□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Arhgef17Q80U35 2057 aa11.82□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Trav9n-4A0A075B631 113 aa11.82□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Znf239P24399 201 aa11.82□□□□□ -0.52
Clcn3-203ENSMUST00000093490 FancmQ8BGE5 2021 aa11.82□□□□□ -0.52
Clcn3-203ENSMUST00000093490 TncQ80YX1 2110 aa11.82□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Prh1P05142 261 aa11.82□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Pou2af1Q64693 256 aa11.82□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Fam222aQ6PGH4 453 aa11.82□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Tns1E9Q0S6 1888 aaKnown RBP11.81□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Trav13-2A0A075B649 110 aa11.81□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Klk12B2RVZ0 247 aa11.81□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Qrich2A0A140LIY9 2337 aa11.81□□□□□ -0.52
Clcn3-203ENSMUST00000093490 CrygdP04342 174 aa11.81□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Gm37389A0A0A6YW05 95 aa11.81□□□□□ -0.52
Clcn3-203ENSMUST00000093490 B230359F08RikA0A0B4J1K3 109 aa11.81□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Rbx1P62878 108 aa11.81□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Trav13-1A0A075B644 110 aa11.8□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Igkv8-18A0A0B4J1J3 123 aa11.8□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Gm8439G3UWA7 96 aa11.8□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Ighv2-3A0A075B696 115 aa11.79□□□□□ -0.52
Clcn3-203ENSMUST00000093490 P18527 97 aa11.79□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Q9DAQ5 155 aa11.79□□□□□ -0.52
Clcn3-203ENSMUST00000093490 PkdrejQ9Z0T6 2126 aa11.79□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Fgfbp3Q1HCM0 245 aa11.79□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Klk5Q9D140 293 aa11.79□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Ighv2-6-8A0A0A6YWY9 116 aa11.78□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Igkv1-88A0A140T8N1 120 aa11.78□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Gm12689Q8BQU9 117 aa11.78□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Igkv3-5A0A140T8M6 119 aa11.78□□□□□ -0.52
Clcn3-203ENSMUST00000093490 A130051J06RikQ8CAU1 227 aa11.78□□□□□ -0.52
Clcn3-203ENSMUST00000093490 P84751 237 aa11.78□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Ighv1-63A0A075B5X2 117 aa11.78□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Esm1Q9QYY7 184 aa11.78□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Rpl18aP62717 176 aaKnown RBP11.77□□□□□ -0.52
Clcn3-203ENSMUST00000093490 Ebi3O35228 228 aa11.77□□□□□ -0.53
Clcn3-203ENSMUST00000093490 Ighv1-5A0A0A6YWG2 117 aa11.77□□□□□ -0.53
Clcn3-203ENSMUST00000093490 FcorP0DJI6 106 aa11.77□□□□□ -0.53
Clcn3-203ENSMUST00000093490 Defb2P82020 71 aa11.77□□□□□ -0.53
Clcn3-203ENSMUST00000093490 F5O88783 2183 aa11.76□□□□□ -0.53
Clcn3-203ENSMUST00000093490 U90926O08546 118 aa11.76□□□□□ -0.53
Clcn3-203ENSMUST00000093490 Cd27P41272 250 aa11.76□□□□□ -0.53
Clcn3-203ENSMUST00000093490 AcacbE9Q4Z2 2448 aa11.75□□□□□ -0.53
Clcn3-203ENSMUST00000093490 CnfnQ6PCW6 111 aa11.75□□□□□ -0.53
Clcn3-203ENSMUST00000093490 DscamQ9ERC8 2013 aa11.75□□□□□ -0.53
Clcn3-203ENSMUST00000093490 Dopey2Q3UHQ6 2295 aa11.75□□□□□ -0.53
Clcn3-203ENSMUST00000093490 AtrxQ61687 2476 aaKnown RBP11.75□□□□□ -0.53
Clcn3-203ENSMUST00000093490 Ighv8-12A0A0G2JDE1 119 aa11.74□□□□□ -0.53
Clcn3-203ENSMUST00000093490 Naa38Q9D2U5 125 aa11.74□□□□□ -0.53
Clcn3-203ENSMUST00000093490 Chchd7Q8K2Q5 85 aa11.74□□□□□ -0.53
Clcn3-203ENSMUST00000093490 Tfpi2O35536 230 aa11.73□□□□□ -0.53
Clcn3-203ENSMUST00000093490 Smim1P0C8K7 78 aa11.73□□□□□ -0.53
Clcn3-203ENSMUST00000093490 Tet1Q3URK3 2007 aaKnown RBP11.73□□□□□ -0.53
Clcn3-203ENSMUST00000093490 Ube2aQ9Z255 152 aa11.73□□□□□ -0.53
Clcn3-203ENSMUST00000093490 Ighv3-3A0A0A6YWL2 116 aa11.73□□□□□ -0.53
Clcn3-203ENSMUST00000093490 Ube2d4D3YUH6 135 aa11.73□□□□□ -0.53
Clcn3-203ENSMUST00000093490 Sox16Q62247 57 aa11.73□□□□□ -0.53
Clcn3-203ENSMUST00000093490 Wnk1P83741 2377 aa11.72□□□□□ -0.53
Clcn3-203ENSMUST00000093490 Heatr5aQ5PRF0 2038 aa11.72□□□□□ -0.53
Clcn3-203ENSMUST00000093490 1700056E22RikF7CNM6 234 aa11.72□□□□□ -0.53
Clcn3-203ENSMUST00000093490 Smrp1Q2MH31 260 aa11.72□□□□□ -0.53
Clcn3-203ENSMUST00000093490 PlaurP35456 327 aa11.72□□□□□ -0.53
Clcn3-203ENSMUST00000093490 Q9D8Q6 235 aa11.72□□□□□ -0.53
Clcn3-203ENSMUST00000093490 TshbP12656 138 aa11.71□□□□□ -0.53
Clcn3-203ENSMUST00000093490 Vpreb3D3Z6J4 130 aa11.71□□□□□ -0.53
Clcn3-203ENSMUST00000093490 Sdk1Q3UH53 2193 aa11.71□□□□□ -0.53
Clcn3-203ENSMUST00000093490 Piezo1E2JF22 2547 aa11.71□□□□□ -0.54
Clcn3-203ENSMUST00000093490 Wipf1Q8K1I7 493 aa11.71□□□□□ -0.54
Clcn3-203ENSMUST00000093490 Ovol3D3YYM0 189 aa11.7□□□□□ -0.54
Clcn3-203ENSMUST00000093490 Shisa2Q8QZV2 295 aa11.7□□□□□ -0.54
Clcn3-203ENSMUST00000093490 Dopey1Q8BL99 2399 aa11.7□□□□□ -0.54
Clcn3-203ENSMUST00000093490 Ighv1-66A0A075B5X5 117 aa11.7□□□□□ -0.54
Clcn3-203ENSMUST00000093490 BtcQ05928 177 aa11.69□□□□□ -0.54
Clcn3-203ENSMUST00000093490 Klk9Q32M27 251 aa11.69□□□□□ -0.54
Clcn3-203ENSMUST00000093490 Ighv10-1A0A0B4J1J6 119 aa11.69□□□□□ -0.54
Clcn3-203ENSMUST00000093490 Ccdc179J3QM76 67 aa11.69□□□□□ -0.54
Clcn3-203ENSMUST00000093490 Edn2P22389 175 aa11.69□□□□□ -0.54
Clcn3-203ENSMUST00000093490 Fhl2O70433 279 aa11.69□□□□□ -0.54
Clcn3-203ENSMUST00000093490 Ly6hQ9WUC3 139 aa11.69□□□□□ -0.54
Clcn3-203ENSMUST00000093490 B430305J03RikQ8BQQ8 176 aa11.68□□□□□ -0.54
Clcn3-203ENSMUST00000093490 Spink4O35679 86 aa11.68□□□□□ -0.54
Clcn3-203ENSMUST00000093490 Ighv1-59A0A0A6YXE0 117 aa11.68□□□□□ -0.54
Clcn3-203ENSMUST00000093490 Eml6Q5SQM0 1958 aa11.68□□□□□ -0.54
Clcn3-203ENSMUST00000093490 Spg11Q3UHA3 2430 aa11.67□□□□□ -0.54
Clcn3-203ENSMUST00000093490 Gm1968Q3T9I3 115 aa11.67□□□□□ -0.54
Clcn3-203ENSMUST00000093490 Gm10401E9Q3K6 71 aa11.67□□□□□ -0.54
Clcn3-203ENSMUST00000093490 Wdr38Q9D994 303 aa11.67□□□□□ -0.54
Clcn3-203ENSMUST00000093490 Gm9767G3X930 207 aa11.67□□□□□ -0.54
Clcn3-203ENSMUST00000093490 Sh2d1aO88890 126 aa11.67□□□□□ -0.54
Clcn3-203ENSMUST00000093490 Wisp2Q9Z0G4 251 aa11.67□□□□□ -0.54
Clcn3-203ENSMUST00000093490 Cox8cA6H666 72 aa11.66□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 48.6 ms