RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Psmb8P28063 276 aa10.52□□□□□ -0.73
Col3a1-201ENSMUST00000087883 Sox16Q62247 57 aa10.52□□□□□ -0.73
Col3a1-201ENSMUST00000087883 Rnf185Q91YT2 192 aa10.52□□□□□ -0.73
Col3a1-201ENSMUST00000087883 P01820 115 aa10.51□□□□□ -0.73
Col3a1-201ENSMUST00000087883 4930535I16RikQ9CUI2 172 aa10.51□□□□□ -0.73
Col3a1-201ENSMUST00000087883 2010109I03RikQ9CQ11 111 aa10.51□□□□□ -0.73
Col3a1-201ENSMUST00000087883 MgamB5THE2 1827 aa10.51□□□□□ -0.73
Col3a1-201ENSMUST00000087883 Igkv3-4A0A140T8Q4 119 aa10.51□□□□□ -0.73
Col3a1-201ENSMUST00000087883 Ncoa6Q9JL19 2067 aa10.5□□□□□ -0.73
Col3a1-201ENSMUST00000087883 Ighv1-82A0A0G2JEU7 117 aa10.5□□□□□ -0.73
Col3a1-201ENSMUST00000087883 Ighv1-61P01749 117 aa10.5□□□□□ -0.73
Col3a1-201ENSMUST00000087883 Q9CX25 107 aa10.49□□□□□ -0.73
Col3a1-201ENSMUST00000087883 H2al1bA0A087WP11 105 aa10.49□□□□□ -0.73
Col3a1-201ENSMUST00000087883 Fam19a1Q7TPG8 133 aa10.49□□□□□ -0.73
Col3a1-201ENSMUST00000087883 Gphb5Q812B2 130 aa10.49□□□□□ -0.73
Col3a1-201ENSMUST00000087883 C1qcQ02105 246 aa10.49□□□□□ -0.73
Col3a1-201ENSMUST00000087883 Igkv3-3A0A140T8Q0 119 aa10.49□□□□□ -0.73
Col3a1-201ENSMUST00000087883 CenpwQ3URR0 86 aa10.49□□□□□ -0.73
Col3a1-201ENSMUST00000087883 Igkv1-117A0A140T8M0 119 aa10.48□□□□□ -0.73
Col3a1-201ENSMUST00000087883 P06320 134 aa10.48□□□□□ -0.73
Col3a1-201ENSMUST00000087883 Znf239P24399 201 aa10.48□□□□□ -0.73
Col3a1-201ENSMUST00000087883 Cox7bP56393 80 aa10.48□□□□□ -0.73
Col3a1-201ENSMUST00000087883 Rp1l1Q8CGM2 1859 aa10.47□□□□□ -0.73
Col3a1-201ENSMUST00000087883 Sprr3O09116 238 aa10.47□□□□□ -0.73
Col3a1-201ENSMUST00000087883 Timm17bQ9Z0V7 172 aa10.46□□□□□ -0.73
Col3a1-201ENSMUST00000087883 CadB2RQC6 2225 aa10.46□□□□□ -0.74
Col3a1-201ENSMUST00000087883 NpwA0A1L1STR8 176 aa10.46□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Defb13Q8R2I4 64 aa10.46□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Prpf8Q99PV0 2335 aaKnown RBP10.46□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Gm12057A0A087WR21 115 aa10.45□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Plac8l1Q08EJ0 177 aa10.45□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Serp2Q6TAW2 65 aa10.45□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Igkv1-110A0A0B4J1I0 119 aa10.45□□□□□ -0.74
Col3a1-201ENSMUST00000087883 TshbP12656 138 aa10.45□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Abca4O35600 2310 aa10.45□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Tcl1b3P56842 122 aa10.44□□□□□ -0.74
Col3a1-201ENSMUST00000087883 P01729 129 aa10.44□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Anapc1P53995 1944 aaKnown RBP10.44□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Ighv10-1A0A0B4J1J6 119 aa10.44□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Tcte2E9PY37 120 aa10.44□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Gm9805F6YK59 57 aa10.44□□□□□ -0.74
Col3a1-201ENSMUST00000087883 A830005F24RikQ8BRT5 167 aa10.44□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Spry2Q9QXV8 315 aa10.44□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Gm12689Q8BQU9 117 aa10.44□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Prr12E9PYL2 2035 aaKnown RBP10.43□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Ighv2-3A0A075B696 115 aa10.43□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Ighv1-62-1A0A075B5U3 116 aa10.43□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Smim1P0C8K7 78 aa10.43□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Ighv8-11A0A075B5X4 119 aa10.43□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Atox1O08997 68 aaKnown RBP10.43□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Lypd6Q8BPP5 171 aa10.43□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Eml6Q5SQM0 1958 aa10.42□□□□□ -0.74
Col3a1-201ENSMUST00000087883 A130051J06RikQ8CAU1 227 aa10.42□□□□□ -0.74
Col3a1-201ENSMUST00000087883 ScxQ64124 207 aa10.42□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Fgf23Q9EPC2 251 aa10.42□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Plxnb3Q9QY40 1902 aa10.41□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Ighv1-63A0A075B5X2 117 aa10.41□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Ighv2-6-8A0A0A6YWY9 116 aa10.41□□□□□ -0.74
Col3a1-201ENSMUST00000087883 9430015G10RikA2ASP7 199 aa10.41□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Dennd4cA6H8H2 1906 aa10.41□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Col24a1Q30D77 1733 aa10.41□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Trav14-1A0A0G2JF94 121 aa10.41□□□□□ -0.74
Col3a1-201ENSMUST00000087883 H2al1aQ5M8Q2 105 aa10.41□□□□□ -0.74
Col3a1-201ENSMUST00000087883 H2al1eQ810S6 105 aa10.41□□□□□ -0.74
Col3a1-201ENSMUST00000087883 1520401A03RikA0A0J9YVH6 598 aa10.41□□□□□ -0.74
Col3a1-201ENSMUST00000087883 AvpP35455 168 aa10.4□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Dscaml1Q4VA61 2053 aa10.4□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Fgfbp3Q1HCM0 245 aa10.4□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Q9D8Q6 235 aa10.4□□□□□ -0.74
Col3a1-201ENSMUST00000087883 NrgnP60761 78 aa10.4□□□□□ -0.74
Col3a1-201ENSMUST00000087883 Usf3B2RUQ2 2221 aa10.4□□□□□ -0.75
Col3a1-201ENSMUST00000087883 Sdk2Q6V4S5 2176 aa10.4□□□□□ -0.75
Col3a1-201ENSMUST00000087883 P01823 113 aa10.39□□□□□ -0.75
Col3a1-201ENSMUST00000087883 Pla2g2dQ9WVF6 144 aa10.39□□□□□ -0.75
Col3a1-201ENSMUST00000087883 Tet1Q3URK3 2007 aaKnown RBP10.39□□□□□ -0.75
Col3a1-201ENSMUST00000087883 Gm16223Q8CBM3 117 aa10.39□□□□□ -0.75
Col3a1-201ENSMUST00000087883 Igkv8-21A0A140T8P7 120 aa10.39□□□□□ -0.75
Col3a1-201ENSMUST00000087883 Lmo4P61969 165 aa10.39□□□□□ -0.75
Col3a1-201ENSMUST00000087883 Ighv1-72P01751 139 aa10.39□□□□□ -0.75
Col3a1-201ENSMUST00000087883 Ighv10-3A0A075B5T6 119 aa10.39□□□□□ -0.75
Col3a1-201ENSMUST00000087883 1700074P13RikQ9D9G7 251 aa10.38□□□□□ -0.75
Col3a1-201ENSMUST00000087883 Ly6gP35461 111 aa10.38□□□□□ -0.75
Col3a1-201ENSMUST00000087883 Ndufb1P0DN34 57 aa10.37□□□□□ -0.75
Col3a1-201ENSMUST00000087883 Arid1bE9Q4N7 2244 aa10.37□□□□□ -0.75
Col3a1-201ENSMUST00000087883 P01755 137 aa10.37□□□□□ -0.75
Col3a1-201ENSMUST00000087883 Defb40Q70KL2 73 aa10.37□□□□□ -0.75
Col3a1-201ENSMUST00000087883 BaalcQ8VHV1 145 aa10.37□□□□□ -0.75
Col3a1-201ENSMUST00000087883 PtprsB0V2N1 1907 aa10.36□□□□□ -0.75
Col3a1-201ENSMUST00000087883 Ighv1-66A0A075B5X5 117 aa10.36□□□□□ -0.75
Col3a1-201ENSMUST00000087883 E130116L18RikQ8BMV6 101 aa10.36□□□□□ -0.75
Col3a1-201ENSMUST00000087883 Notch3Q61982 2318 aa10.36□□□□□ -0.75
Col3a1-201ENSMUST00000087883 Cd27P41272 250 aa10.36□□□□□ -0.75
Col3a1-201ENSMUST00000087883 Fam19a5Q91WE9 132 aa10.36□□□□□ -0.75
Col3a1-201ENSMUST00000087883 Plxnb1Q8CJH3 2119 aa10.35□□□□□ -0.75
Col3a1-201ENSMUST00000087883 Col4a6B1AVK5 1691 aa10.35□□□□□ -0.75
Col3a1-201ENSMUST00000087883 Cox8cA6H666 72 aa10.34□□□□□ -0.75
Col3a1-201ENSMUST00000087883 Wisp2Q9Z0G4 251 aa10.34□□□□□ -0.75
Col3a1-201ENSMUST00000087883 Ly6c2P0CW03 131 aa10.34□□□□□ -0.75
Col3a1-201ENSMUST00000087883 5730596B20RikQ8BQ08 205 aa10.34□□□□□ -0.75
Col3a1-201ENSMUST00000087883 F5O88783 2183 aa10.33□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 110.6 ms