RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Zfp462B1AWL2 2495 aaKnown RBP7.92□□□□□ -1.14
Ptcd1-201ENSMUST00000031628 Gm37988J3QM41 62 aa7.92□□□□□ -1.14
Ptcd1-201ENSMUST00000031628 Defb18Q30KP5 85 aa7.92□□□□□ -1.14
Ptcd1-201ENSMUST00000031628 Ndufb4Q9CQC7 129 aa7.92□□□□□ -1.14
Ptcd1-201ENSMUST00000031628 Hivep3A2A884 2348 aa7.91□□□□□ -1.14
Ptcd1-201ENSMUST00000031628 Gm10135F6TEE5 83 aa7.91□□□□□ -1.14
Ptcd1-201ENSMUST00000031628 Hoxd3P09027 433 aa7.91□□□□□ -1.14
Ptcd1-201ENSMUST00000031628 Ormdl2Q9CQZ0 153 aa7.91□□□□□ -1.14
Ptcd1-201ENSMUST00000031628 Crip2Q9DCT8 208 aaKnown RBP7.91□□□□□ -1.14
Ptcd1-201ENSMUST00000031628 Ighv2-7A0A075B5Q8 116 aa7.91□□□□□ -1.14
Ptcd1-201ENSMUST00000031628 Dand5Q76LW6 185 aa7.91□□□□□ -1.14
Ptcd1-201ENSMUST00000031628 Psmb11Q8BG41 302 aa7.91□□□□□ -1.14
Ptcd1-201ENSMUST00000031628 Gemin7Q9CWY4 129 aa7.91□□□□□ -1.14
Ptcd1-201ENSMUST00000031628 Gm9513B3GLJ6 99 aa7.9□□□□□ -1.14
Ptcd1-201ENSMUST00000031628 Gm9922Q8C3P1 144 aa7.9□□□□□ -1.14
Ptcd1-201ENSMUST00000031628 Gm28374F6SG70 93 aa7.9□□□□□ -1.14
Ptcd1-201ENSMUST00000031628 OdaphJ3QNT8 126 aa7.9□□□□□ -1.14
Ptcd1-201ENSMUST00000031628 Gata1P17679 413 aa7.9□□□□□ -1.14
Ptcd1-201ENSMUST00000031628 Q9DAB9 146 aa7.9□□□□□ -1.14
Ptcd1-201ENSMUST00000031628 Plac1Q9JI83 173 aa7.9□□□□□ -1.14
Ptcd1-201ENSMUST00000031628 Gm10226O88253 85 aa7.89□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Gm9913Q8BQQ2 135 aa7.89□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 BaalcQ8VHV1 145 aa7.89□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Ankrd17Q99NH0 2603 aaKnown RBP7.89□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Usp9yF8VPU6 2556 aa7.89□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Atp5g3P56384 141 aa7.89□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Rab37Q9JKM7 223 aa7.89□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Pdzd2E9Q1M1 2796 aa7.89□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Ccdc179J3QM76 67 aa7.89□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Trav7d-3Q5R1I1 112 aa7.89□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Epg5Q80TA9 2572 aa7.88□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 1810032O08RikE9PZV8 113 aa7.88□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Gm2564F6Z9S8 108 aa7.88□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Q5BN45 167 aa7.88□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Ube2wQ8VDW4 151 aa7.88□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Tac4Q99N14 128 aa7.88□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Ndufs7Q9DC70 224 aa7.88□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Setd2E9Q5F9 2537 aa7.88□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Helz2E9QAM5 2947 aaKnown RBP7.88□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Zfp951A0A087WRH0 451 aa7.88□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Ighv3-3A0A0A6YWL2 116 aa7.87□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 NpwA0A1L1STR8 176 aa7.87□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Foxi2Q3I5G5 311 aa7.87□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 SrarpQ3ULG3 163 aa7.87□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Ighv1-75A0A075B5Y2 117 aa7.87□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 P01811 117 aa7.87□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 P01837 106 aa7.87□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 TtrP07309 147 aa7.87□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Dynlrb2Q9DAJ5 96 aa7.87□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Unc79Q0KK59 2596 aa7.87□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Ighv2-3A0A075B696 115 aa7.87□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Gm17732E9Q5I2 61 aa7.87□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Snrpd3P62320 126 aaKnown RBP7.87□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Ss18Q62280 418 aa7.87□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Gm35549A0A0N4SUS7 141 aa7.86□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Iah1Q9DB29 249 aa7.86□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 NipblQ6KCD5 2798 aaKnown RBP7.86□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Igkv4-69A0A0B4J1I6 116 aa7.86□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 P01753 117 aa7.86□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Defa23Q5G866 93 aa7.86□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Gm10295Q8CCF3 114 aa7.86□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Klk11Q9QYN3 276 aa7.86□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Trav4d-3A0A075B625 110 aa7.85□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Gphb5Q812B2 130 aa7.85□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Zc2hc1bQ9D534 172 aa7.85□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Esm1Q9QYY7 184 aa7.85□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 A830031A19RikQ8BNT5 113 aa7.85□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Ighv1-52A0A0A6YXC3 117 aa7.84□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Tmem258P61166 79 aa7.84□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 1500011B03RikQ3TTH7 73 aa7.84□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Mapk1ip1lQ8BH93 242 aa7.84□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 FcorP0DJI6 106 aa7.84□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Defb47Q30KN1 79 aa7.84□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Gm10767Q3TQP0 103 aa7.84□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Lyzl4Q9D925 145 aa7.84□□□□□ -1.15
Ptcd1-201ENSMUST00000031628 Gm17455G3UW87 128 aa7.83□□□□□ -1.16
Ptcd1-201ENSMUST00000031628 AngP21570 145 aa7.83□□□□□ -1.16
Ptcd1-201ENSMUST00000031628 Polr2kQ63871 58 aa7.83□□□□□ -1.16
Ptcd1-201ENSMUST00000031628 Atp5lQ9CPQ8 103 aa7.83□□□□□ -1.16
Ptcd1-201ENSMUST00000031628 Triap1Q9D8Z2 76 aa7.83□□□□□ -1.16
Ptcd1-201ENSMUST00000031628 Gm19935A0A1B0GSF9 52 aa7.83□□□□□ -1.16
Ptcd1-201ENSMUST00000031628 Reg3gO09049 174 aa7.83□□□□□ -1.16
Ptcd1-201ENSMUST00000031628 Ccl21aP84444 133 aa7.83□□□□□ -1.16
Ptcd1-201ENSMUST00000031628 Ccl21bP86792 133 aa7.83□□□□□ -1.16
Ptcd1-201ENSMUST00000031628 Ccl21cP86793 133 aa7.83□□□□□ -1.16
Ptcd1-201ENSMUST00000031628 Synj2bpQ9D6K5 145 aa7.83□□□□□ -1.16
Ptcd1-201ENSMUST00000031628 Tenm3Q9WTS6 2715 aa7.83□□□□□ -1.16
Ptcd1-201ENSMUST00000031628 Col7a1Q63870 2944 aa7.83□□□□□ -1.16
Ptcd1-201ENSMUST00000031628 Gm21748Q3UE70 102 aa7.82□□□□□ -1.16
Ptcd1-201ENSMUST00000031628 Rpl36-ps4A0A140T8U4 117 aa7.82□□□□□ -1.16
Ptcd1-201ENSMUST00000031628 Atp5g1Q9CR84 136 aa7.82□□□□□ -1.16
Ptcd1-201ENSMUST00000031628 Phlda3Q9WV95 125 aa7.82□□□□□ -1.16
Ptcd1-201ENSMUST00000031628 Akap13E9Q394 2776 aa7.82□□□□□ -1.16
Ptcd1-201ENSMUST00000031628 BsnO88737 3942 aa7.82□□□□□ -1.16
Ptcd1-201ENSMUST00000031628 Trav7-6A0A075B640 112 aa7.82□□□□□ -1.16
Ptcd1-201ENSMUST00000031628 Dmbt1Q60997 2085 aa7.81□□□□□ -1.16
Ptcd1-201ENSMUST00000031628 C920008G01RikA0A0B4J1N1 112 aa7.81□□□□□ -1.16
Ptcd1-201ENSMUST00000031628 Igkv4-62A0A0G2JDW9 117 aa7.81□□□□□ -1.16
Ptcd1-201ENSMUST00000031628 Fam19a4Q7TPG5 135 aa7.81□□□□□ -1.16
Ptcd1-201ENSMUST00000031628 Higd1aQ9JLR9 95 aa7.81□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms