RNA–Protein interactions for RNA: ENSMUST00000031377.8

Scarb2-201, Transcript of Lysosome membrane protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scarb2, Length 4,698 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb2-201ENSMUST00000031377 Lgals4Q8K419 326 aa10.07□□□□□ -0.8
Scarb2-201ENSMUST00000031377 Lst1O08843 95 aa10.06□□□□□ -0.8
Scarb2-201ENSMUST00000031377 Ccl21aP84444 133 aa10.06□□□□□ -0.8
Scarb2-201ENSMUST00000031377 Ccl21bP86792 133 aa10.06□□□□□ -0.8
Scarb2-201ENSMUST00000031377 Ccl21cP86793 133 aa10.06□□□□□ -0.8
Scarb2-201ENSMUST00000031377 Defb18Q30KP5 85 aa10.06□□□□□ -0.8
Scarb2-201ENSMUST00000031377 Gm5089A1L3C8 106 aa10.06□□□□□ -0.8
Scarb2-201ENSMUST00000031377 TrrapQ80YV3 2565 aaKnown RBP10.06□□□□□ -0.8
Scarb2-201ENSMUST00000031377 Gata1P17679 413 aa10.06□□□□□ -0.8
Scarb2-201ENSMUST00000031377 Q9D8Q6 235 aa10.06□□□□□ -0.8
Scarb2-201ENSMUST00000031377 Pla2g2cP48076 150 aa10.05□□□□□ -0.8
Scarb2-201ENSMUST00000031377 Mrpl55Q9CZ83 127 aa10.05□□□□□ -0.8
Scarb2-201ENSMUST00000031377 Gm9925F6T2U3 160 aa10.04□□□□□ -0.8
Scarb2-201ENSMUST00000031377 E130218I03RikA0A0U1RNU5 63 aa10.04□□□□□ -0.8
Scarb2-201ENSMUST00000031377 Polr2kQ63871 58 aa10.04□□□□□ -0.8
Scarb2-201ENSMUST00000031377 Gm21748Q3UE70 102 aa10.03□□□□□ -0.8
Scarb2-201ENSMUST00000031377 Igkv8-24A0A140T8P5 121 aa10.03□□□□□ -0.8
Scarb2-201ENSMUST00000031377 AspmQ8CJ27 3122 aa10.03□□□□□ -0.8
Scarb2-201ENSMUST00000031377 Trav13-4-dv7A0A075B6C2 110 aa10.03□□□□□ -0.8
Scarb2-201ENSMUST00000031377 Xcl1P47993 114 aa10.03□□□□□ -0.8
Scarb2-201ENSMUST00000031377 Atp5g3P56384 141 aa10.03□□□□□ -0.8
Scarb2-201ENSMUST00000031377 Q99M08 65 aa10.03□□□□□ -0.8
Scarb2-201ENSMUST00000031377 Crlf1Q9JM58 425 aa10.03□□□□□ -0.8
Scarb2-201ENSMUST00000031377 Myo18bE9PV66 2605 aa10.03□□□□□ -0.8
Scarb2-201ENSMUST00000031377 Ighv1-66A0A075B5X5 117 aa10.03□□□□□ -0.8
Scarb2-201ENSMUST00000031377 1520401A03RikA0A0J9YVH6 598 aa10.03□□□□□ -0.8
Scarb2-201ENSMUST00000031377 Gm10226O88253 85 aa10.03□□□□□ -0.8
Scarb2-201ENSMUST00000031377 Pglyrp1O88593 182 aa10.03□□□□□ -0.8
Scarb2-201ENSMUST00000031377 Ighv3-3A0A0A6YWL2 116 aa10.02□□□□□ -0.8
Scarb2-201ENSMUST00000031377 Foxc1Q61572 553 aa10.02□□□□□ -0.8
Scarb2-201ENSMUST00000031377 Fbn2Q61555 2907 aa10.02□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Dmxl1Q6PNC0 3013 aa10.02□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Ighv1-85A0A075B5Y6 117 aa10.02□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Gm4861Q8C5A4 106 aa10.02□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Atp6v0e2Q91XE7 81 aa10.02□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Ighv1-11A0A0A6YWI9 117 aa10.01□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Socs3O35718 225 aa10.01□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Hcfc1Q61191 2045 aaKnown RBP10.01□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Igkv4-68A0A0B4J1I7 117 aa10.01□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Ash1lQ99MY8 2958 aa10.01□□□□□ -0.81
Scarb2-201ENSMUST00000031377 2310009B15RikA0A0A6YWI4 143 aa10.01□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Ighv8-12A0A0G2JDE1 119 aa10.01□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Igkv8-16A0A0G2JDG9 121 aa10.01□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Spink13Q3UTS8 97 aa10.01□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Lage3Q9CR70 148 aa10.01□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Trav13d-4A0A0G2JFX3 110 aa10□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Ucn2Q99ML8 113 aa10□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Cdk2ap2Q9CPY4 127 aa10□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Col6a3E9PWQ3 3284 aa10□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Sh2d1aO88890 126 aa10□□□□□ -0.81
Scarb2-201ENSMUST00000031377 B230359F08RikA0A0B4J1K3 109 aa10□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Q8R092 253 aa10□□□□□ -0.81
Scarb2-201ENSMUST00000031377 MplkipQ9D011 178 aa10□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Ighv1-72P01751 139 aa10□□□□□ -0.81
Scarb2-201ENSMUST00000031377 PemtQ61907 199 aa10□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Cfc1P97766 202 aa9.98□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Igkv1-35A0A0G2JDE5 120 aa9.98□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Reg3dQ9QUS9 175 aa9.98□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Zfp462B1AWL2 2495 aaKnown RBP9.98□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Igkv3-1A0A075B5P1 119 aa9.98□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Gphb5Q812B2 130 aa9.98□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Gm20726G3UX18 150 aa9.98□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Trav13-1A0A075B644 110 aa9.97□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Defa21Q8C1P2 93 aa9.97□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Morn3Q8C5T4 241 aa9.97□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Ighv8-5A0A0A6YY60 119 aa9.97□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Fam222aQ6PGH4 453 aa9.97□□□□□ -0.81
Scarb2-201ENSMUST00000031377 BB014433Q8C5R5 389 aa9.97□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Gm10490F6VBM2 120 aa9.97□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Gm10251J3QPM5 127 aa9.97□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Lamtor3O88653 124 aa9.97□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Trav4d-3A0A075B625 110 aa9.97□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Igkv4-53A0A0G2JFC6 119 aa9.97□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Smim20D3Z7Q2 69 aa9.97□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Fam110dQ80X91 271 aa9.97□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Trav13n-2A0A0G2JF93 110 aa9.96□□□□□ -0.81
Scarb2-201ENSMUST00000031377 Rnase1P00683 149 aa9.96□□□□□ -0.82
Scarb2-201ENSMUST00000031377 Pet100P0DJE0 76 aa9.96□□□□□ -0.82
Scarb2-201ENSMUST00000031377 Trav13-2A0A075B649 110 aa9.95□□□□□ -0.82
Scarb2-201ENSMUST00000031377 Celsr1O35161 3034 aa9.95□□□□□ -0.82
Scarb2-201ENSMUST00000031377 Dad1P61804 113 aa9.95□□□□□ -0.82
Scarb2-201ENSMUST00000031377 1700010B08RikQ9DAI7 102 aa9.95□□□□□ -0.82
Scarb2-201ENSMUST00000031377 KalrnA2CG49 2964 aa9.95□□□□□ -0.82
Scarb2-201ENSMUST00000031377 Myo15bI7HPW8 3033 aa9.94□□□□□ -0.82
Scarb2-201ENSMUST00000031377 Fhl2O70433 279 aa9.94□□□□□ -0.82
Scarb2-201ENSMUST00000031377 Igkv3-9A0A140T8P4 119 aa9.94□□□□□ -0.82
Scarb2-201ENSMUST00000031377 Prr9Q8BV84 116 aa9.94□□□□□ -0.82
Scarb2-201ENSMUST00000031377 Ly6hQ9WUC3 139 aa9.94□□□□□ -0.82
Scarb2-201ENSMUST00000031377 PrlhG3UWC3 86 aa9.93□□□□□ -0.82
Scarb2-201ENSMUST00000031377 AngP21570 145 aa9.93□□□□□ -0.82
Scarb2-201ENSMUST00000031377 Ube2d1P61080 147 aaKnown RBP9.93□□□□□ -0.82
Scarb2-201ENSMUST00000031377 Zfp951A0A087WRH0 451 aa9.93□□□□□ -0.82
Scarb2-201ENSMUST00000031377 Wdr38Q9D994 303 aa9.93□□□□□ -0.82
Scarb2-201ENSMUST00000031377 P01729 129 aa9.92□□□□□ -0.82
Scarb2-201ENSMUST00000031377 Smim26Q3V460 107 aa9.92□□□□□ -0.82
Scarb2-201ENSMUST00000031377 Dand5Q76LW6 185 aa9.92□□□□□ -0.82
Scarb2-201ENSMUST00000031377 Lyrm9Q3UN90 78 aa9.92□□□□□ -0.82
Scarb2-201ENSMUST00000031377 Spata25Q9DA57 226 aa9.92□□□□□ -0.82
Scarb2-201ENSMUST00000031377 Notch2O35516 2470 aa9.92□□□□□ -0.82
Scarb2-201ENSMUST00000031377 Trav4-3A0A0B4J1K1 110 aa9.92□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 110.4 ms