RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Reg3gO09049 174 aa7.17□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Mustn1Q99JI1 82 aa7.17□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Iah1Q9DB29 249 aa7.17□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Igkv4-69A0A0B4J1I6 116 aa7.17□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Cox8cA6H666 72 aa7.17□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Gm10251J3QPM5 127 aa7.17□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Rbm3O89086 153 aaKnown RBP7.17□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Prr3Q811B5 190 aaKnown RBP7.17□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 BaalcQ8VHV1 145 aa7.17□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Ighv8-4A0A0A6YW26 117 aa7.17□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Csdc2Q91YQ3 154 aa7.17□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Trav14d-3-dv8A0A075B619 120 aa7.17□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Gm8439G3UWA7 96 aa7.17□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Gm7102J3QQ10 178 aa7.17□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 GhrhP16043 103 aa7.17□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Tmem14cQ9CQN6 114 aa7.17□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Q9D131 166 aa7.17□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Ighv2-3A0A075B696 115 aa7.16□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Gm6040Q4QY32 63 aa7.16□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 CnfnQ6PCW6 111 aa7.16□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Crip3Q6Q6R3 243 aa7.16□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Morn3Q8C5T4 241 aa7.16□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Pla2g2eQ9QUL3 142 aa7.16□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Gm15294V9GXA7 121 aa7.16□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 P01741 114 aa7.16□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 NpyP57774 97 aa7.16□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Wfdc2Q9DAU7 174 aa7.16□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Ighv1-75A0A075B5Y2 117 aa7.16□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Trav6n-6A0A075B6B2 114 aa7.16□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 1810032O08RikE9PZV8 113 aa7.16□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 NpsP0C0P8 89 aa7.16□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Q3UNZ8 350 aa7.16□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Tac4Q99N14 128 aa7.16□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Card19Q9D1I2 183 aa7.16□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Unc79Q0KK59 2596 aa7.15□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Gm29423A0A087WRM1 55 aa7.15□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Gm17732E9Q5I2 61 aa7.15□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 PpdpfQ9CR37 115 aa7.15□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Trav14-2A0A075B694 121 aa7.15□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 P01729 129 aa7.15□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Gm1968Q3T9I3 115 aa7.15□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Rnf185Q91YT2 192 aa7.15□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Xcl1P47993 114 aa7.15□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Synj2bpQ9D6K5 145 aa7.15□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 OtorQ9JIE3 128 aa7.15□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Muc2Q80Z19 2680 aa7.15□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Gm7075D3Z497 112 aa7.15□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 PlnP61014 52 aa7.15□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Cops9Q3U898 57 aa7.15□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Rbmy1bQ60990 380 aa7.15□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Ankrd17Q99NH0 2603 aaKnown RBP7.14□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 LhbO09108 141 aa7.14□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Cd99Q8VCN6 175 aa7.14□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Fam216aQ9DB54 251 aa7.14□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 TroQ6DIC6 2087 aa7.14□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 BC107364E9Q5A2 140 aa7.14□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 A930009A15RikG3UYI6 118 aa7.14□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Ccl25O35903 144 aa7.14□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 P01747 120 aa7.14□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Psmb8P28063 276 aa7.14□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Cox6b1P56391 86 aaKnown RBP7.14□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Fhl2O70433 279 aa7.14□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Vpreb1P13372 142 aa7.14□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Znf740Q6NZQ6 180 aa7.14□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 MycbQ6P8Z1 170 aa7.14□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Psmb11Q8BG41 302 aa7.14□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Nav3Q80TN7 2359 aa7.14□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Gm35549A0A0N4SUS7 141 aa7.13□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Gm45521A0A1B0GRK0 198 aa7.13□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Ighv3-3A0A0A6YWL2 116 aa7.13□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Mrps12O35680 139 aa7.13□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 P06330 118 aa7.13□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Gm5464Q3UY29 175 aa7.13□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Ndufa4Q62425 82 aaKnown RBP7.13□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Ormdl2Q9CQZ0 153 aa7.13□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Utp20Q5XG71 2788 aaKnown RBP7.13□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 P06328 117 aa7.13□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Sumo2P61957 95 aaKnown RBP7.13□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Gpx1P11352 201 aa7.12□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Cox8bP48772 70 aa7.12□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Wfdc15aQ8BH89 80 aa7.12□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Gm20499D3Z4G5 72 aa7.12□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Ube2wQ8VDW4 151 aa7.12□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Krtap26-1Q9D7N2 215 aa7.12□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Gm933J3QPC1 141 aa7.12□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 P01786 117 aa7.12□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 TshbP12656 138 aa7.12□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Rpl36-ps4A0A140T8U4 117 aa7.11□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 H1fxQ80ZM5 188 aa7.11□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Tomm6Q9CQN3 74 aa7.11□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 PmvkQ9D1G2 192 aa7.11□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Dnal4Q9DCM4 105 aa7.11□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Umad1E0CX23 159 aa7.11□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Mllt11P97783 90 aa7.11□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Gphb5Q812B2 130 aa7.11□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Tep1P97499 2629 aa7.11□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Trav6-6A0A075B603 114 aa7.11□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Igkv4-74A0A0B4J1I3 119 aa7.11□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Gm10337F7DEP7 55 aa7.11□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 P01736 120 aa7.11□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms