RNA–Protein interactions for RNA: ENSMUST00000205694.1

Rnf40-202, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf40, Length 5,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-202ENSMUST00000205694 Rpl39P62892 51 aa10.18□□□□□ -0.78
Rnf40-202ENSMUST00000205694 Trav4-3A0A0B4J1K1 110 aa10.18□□□□□ -0.78
Rnf40-202ENSMUST00000205694 Gm14137Q8CE97 175 aa10.18□□□□□ -0.78
Rnf40-202ENSMUST00000205694 Hrct1Q9D6B9 109 aa10.18□□□□□ -0.78
Rnf40-202ENSMUST00000205694 Hivep3A2A884 2348 aa10.18□□□□□ -0.78
Rnf40-202ENSMUST00000205694 Tmem243B2RVB9 118 aa10.17□□□□□ -0.78
Rnf40-202ENSMUST00000205694 Rbm3O89086 153 aaKnown RBP10.17□□□□□ -0.78
Rnf40-202ENSMUST00000205694 B9d2Q3UK10 175 aa10.17□□□□□ -0.78
Rnf40-202ENSMUST00000205694 1700012A03RikQ9DAF1 130 aa10.17□□□□□ -0.78
Rnf40-202ENSMUST00000205694 Igkv8-18A0A0B4J1J3 123 aa10.17□□□□□ -0.78
Rnf40-202ENSMUST00000205694 Spink10Q8CAC8 162 aa10.17□□□□□ -0.78
Rnf40-202ENSMUST00000205694 Tmem223Q9CQE2 199 aaKnown RBP10.17□□□□□ -0.78
Rnf40-202ENSMUST00000205694 MifP34884 115 aaKnown RBP10.16□□□□□ -0.78
Rnf40-202ENSMUST00000205694 Rbmy1bQ60990 380 aa10.16□□□□□ -0.78
Rnf40-202ENSMUST00000205694 Gm10251J3QPM5 127 aa10.16□□□□□ -0.78
Rnf40-202ENSMUST00000205694 Rnase1P00683 149 aa10.16□□□□□ -0.78
Rnf40-202ENSMUST00000205694 Tmem258P61166 79 aa10.16□□□□□ -0.78
Rnf40-202ENSMUST00000205694 Gm2916Q9D9B9 127 aa10.16□□□□□ -0.78
Rnf40-202ENSMUST00000205694 Trav13d-4A0A0G2JFX3 110 aa10.15□□□□□ -0.78
Rnf40-202ENSMUST00000205694 Odf3l1Q810P2 275 aa10.15□□□□□ -0.78
Rnf40-202ENSMUST00000205694 Gata1P17679 413 aa10.15□□□□□ -0.79
Rnf40-202ENSMUST00000205694 P84751 237 aa10.15□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Trav13n-1A0A0G2JEU8 110 aa10.14□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Pla2g2cP48076 150 aa10.14□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Cdpf1Q8R3A2 119 aa10.14□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Trav13-2A0A075B649 110 aa10.14□□□□□ -0.79
Rnf40-202ENSMUST00000205694 NrgnP60761 78 aa10.14□□□□□ -0.79
Rnf40-202ENSMUST00000205694 9430069I07RikQ9CX21 111 aa10.14□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Odf3Q920N1 254 aa10.13□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Mlst8Q9DCJ1 326 aa10.13□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Dennd4cA6H8H2 1906 aa10.13□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Reg3bP35230 175 aa10.13□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Pcnx2Q5DU28 2122 aa10.13□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Tnfrsf23Q9ER63 176 aa10.13□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Mrpl35Q9CQL6 188 aa10.13□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Iglc1A0A0G2JE99 106 aa10.12□□□□□ -0.79
Rnf40-202ENSMUST00000205694 P01843 105 aa10.12□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Gm10735Q3US96 136 aa10.12□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Gm20726G3UX18 150 aa10.12□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Gm9958Q8C9U4 106 aa10.12□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Gm10295Q8CCF3 114 aa10.12□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Notch2O35516 2470 aa10.12□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Igkv1-88A0A140T8N1 120 aa10.12□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Col8a2P25318 699 aa10.12□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Higd2aQ9CQJ1 106 aa10.12□□□□□ -0.79
Rnf40-202ENSMUST00000205694 SrcapA0A087WQ44 3271 aa10.12□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Ighv1-11A0A0A6YWI9 117 aa10.12□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Igkv3-10A0A0G2JGN0 119 aa10.12□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Gm21060J3KMU4 56 aa10.12□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Gm17472A0A075B683 117 aa10.11□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Acyp1P56376 99 aa10.11□□□□□ -0.79
Rnf40-202ENSMUST00000205694 1700010B08RikQ9DAI7 102 aa10.11□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Gm3285A0A1W2P7U0 201 aa10.11□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Gm12353A2AGJ4 60 aa10.11□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Tet1Q3URK3 2007 aaKnown RBP10.11□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Trav13d-1A0A075B606 110 aa10.1□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Igkv3-5A0A140T8M6 119 aa10.1□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Fgf6P21658 208 aa10.1□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Ube2aQ9Z255 152 aa10.1□□□□□ -0.79
Rnf40-202ENSMUST00000205694 P01729 129 aa10.1□□□□□ -0.79
Rnf40-202ENSMUST00000205694 4930470P17RikQ9D542 155 aa10.1□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Gm5878E9PUB3 99 aa10.09□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Sprr3O09116 238 aa10.09□□□□□ -0.79
Rnf40-202ENSMUST00000205694 BikO70337 150 aa10.09□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Gphb5Q812B2 130 aa10.09□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Q9CX25 107 aa10.09□□□□□ -0.79
Rnf40-202ENSMUST00000205694 OtoglF7A4A7 2325 aa10.09□□□□□ -0.79
Rnf40-202ENSMUST00000205694 NpyP57774 97 aa10.09□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Lmo4P61969 165 aa10.09□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Gm17359A0A0G2JEB7 487 aa10.09□□□□□ -0.79
Rnf40-202ENSMUST00000205694 Ndufa4l2Q4FZG9 87 aa10.09□□□□□ -0.79
Rnf40-202ENSMUST00000205694 AngP21570 145 aa10.08□□□□□ -0.8
Rnf40-202ENSMUST00000205694 P06328 117 aa10.08□□□□□ -0.8
Rnf40-202ENSMUST00000205694 Fxyd5P97808 178 aa10.08□□□□□ -0.8
Rnf40-202ENSMUST00000205694 Trav7-6A0A075B640 112 aa10.07□□□□□ -0.8
Rnf40-202ENSMUST00000205694 Trav11A0A0B4J1J9 114 aa10.07□□□□□ -0.8
Rnf40-202ENSMUST00000205694 Gm42674D3YUT9 64 aa10.07□□□□□ -0.8
Rnf40-202ENSMUST00000205694 Gm17577J3QNF7 156 aa10.07□□□□□ -0.8
Rnf40-202ENSMUST00000205694 Ebi3O35228 228 aa10.07□□□□□ -0.8
Rnf40-202ENSMUST00000205694 Col4a2P08122 1707 aa10.07□□□□□ -0.8
Rnf40-202ENSMUST00000205694 P01820 115 aa10.07□□□□□ -0.8
Rnf40-202ENSMUST00000205694 Klk5Q9D140 293 aa10.07□□□□□ -0.8
Rnf40-202ENSMUST00000205694 Nav2E9Q842 2432 aa10.07□□□□□ -0.8
Rnf40-202ENSMUST00000205694 AW146154Q3TPQ7 468 aa10.07□□□□□ -0.8
Rnf40-202ENSMUST00000205694 Trav13-1A0A075B644 110 aa10.07□□□□□ -0.8
Rnf40-202ENSMUST00000205694 Cyyr1Q8VIH7 165 aa10.07□□□□□ -0.8
Rnf40-202ENSMUST00000205694 Gm37389A0A0A6YW05 95 aa10.06□□□□□ -0.8
Rnf40-202ENSMUST00000205694 Gm10542F6XDR3 90 aa10.06□□□□□ -0.8
Rnf40-202ENSMUST00000205694 Ramp1Q9WTJ5 148 aa10.06□□□□□ -0.8
Rnf40-202ENSMUST00000205694 BC067074F6RXI4 2391 aa10.06□□□□□ -0.8
Rnf40-202ENSMUST00000205694 Trav13-4-dv7A0A075B6C2 110 aa10.06□□□□□ -0.8
Rnf40-202ENSMUST00000205694 Klk12B2RVZ0 247 aa10.06□□□□□ -0.8
Rnf40-202ENSMUST00000205694 Igkv2-109A0A075B5K6 120 aa10.06□□□□□ -0.8
Rnf40-202ENSMUST00000205694 Gm3618D3Z4P5 127 aa10.06□□□□□ -0.8
Rnf40-202ENSMUST00000205694 Gm5468Q8C3D3 155 aa10.06□□□□□ -0.8
Rnf40-202ENSMUST00000205694 Prr12E9PYL2 2035 aaKnown RBP10.05□□□□□ -0.8
Rnf40-202ENSMUST00000205694 C2cd3Q52KB6 2323 aa10.05□□□□□ -0.8
Rnf40-202ENSMUST00000205694 Rpl18aP62717 176 aaKnown RBP10.05□□□□□ -0.8
Rnf40-202ENSMUST00000205694 Spink8Q09TK9 105 aa10.05□□□□□ -0.8
Rnf40-202ENSMUST00000205694 Iglv1A0A075B663 117 aa10.05□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 77.6 ms