RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Defa21Q8C1P2 93 aa10.51□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 SelenowP63300 88 aa10.51□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 Defb47Q30KN1 79 aa10.51□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 PtprbB2RU80 1998 aa10.5□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 Lst1O08843 95 aa10.5□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 Cfc1P97766 202 aa10.5□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 Ndufa12Q7TMF3 145 aaKnown RBP10.5□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 Spag11Q8K4N2 71 aa10.5□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 Igkv4-62A0A0G2JDW9 117 aa10.5□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 Spink10Q8CAC8 162 aa10.5□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 Ucn2Q99ML8 113 aa10.5□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 Igkv8-34A0A0G2JDU0 121 aa10.49□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 Rmi2Q3UPE3 149 aa10.49□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 Igkv6-13A0A0G2JGY3 119 aa10.49□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 Tmem243B2RVB9 118 aa10.49□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 Gphb5Q812B2 130 aa10.49□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 Igkv3-9A0A140T8P4 119 aa10.48□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 Smim20D3Z7Q2 69 aa10.48□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 PemtQ61907 199 aa10.48□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 Odf1Q61999 247 aa10.48□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 Nop10Q9CQS2 64 aa10.48□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 1810032O08RikE9PZV8 113 aa10.48□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 Fgf6P21658 208 aa10.48□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 1700010B08RikQ9DAI7 102 aa10.48□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 Tmem258P61166 79 aa10.47□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 Defa27F2Z403 93 aa10.47□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 Ptpn13Q64512 2453 aa10.47□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 MsmbO08540 113 aa10.47□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 Pfn2Q9JJV2 140 aa10.47□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 Trav11A0A0B4J1J9 114 aa10.46□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 Pglyrp1O88593 182 aa10.46□□□□□ -0.73
Pcdha1-202ENSMUST00000193839 Trav9n-2A0A0G2JDP3 113 aa10.46□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Ighv1-82A0A0G2JEU7 117 aa10.46□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Q9D131 166 aa10.46□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Gm14137Q8CE97 175 aa10.46□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Ighv1-75A0A075B5Y2 117 aa10.45□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Ighv8-5A0A0A6YY60 119 aa10.45□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Ighv8-12A0A0G2JDE1 119 aa10.45□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Gm9513B3GLJ6 99 aa10.45□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Wipf1Q8K1I7 493 aa10.45□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Mrpl35Q9CQL6 188 aa10.44□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Gm42674D3YUT9 64 aa10.44□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Eif4ebp1Q60876 117 aa10.44□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Nav2E9Q842 2432 aa10.44□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 1700056E22RikF7CNM6 234 aa10.44□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Znf239P24399 201 aa10.44□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 CnfnQ6PCW6 111 aa10.44□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Fam19a4Q7TPG5 135 aa10.44□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Trav9d-4A0A0G2JG37 103 aa10.44□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Igkv8-24A0A140T8P5 121 aa10.44□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 BC048562Q80ZQ7 204 aa10.44□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 B430305J03RikQ8BQQ8 176 aa10.44□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 PlaurP35456 327 aa10.43□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 A130051J06RikQ8CAU1 227 aa10.43□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Sorl1O88307 2215 aaKnown RBP10.43□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Trav7-6A0A075B640 112 aa10.43□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 BtcQ05928 177 aa10.43□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Cfap126Q6P8X9 189 aa10.43□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 9430069I07RikQ9CX21 111 aa10.43□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Zfp951A0A087WRH0 451 aa10.43□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 A0A286YE02 88 aa10.43□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Edn2P22389 175 aa10.43□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Rpl39P62892 51 aa10.42□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Cd99Q8VCN6 175 aa10.42□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 DysfQ9ESD7 2090 aa10.42□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Ighv1-11A0A0A6YWI9 117 aa10.42□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 AngP21570 145 aa10.41□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Gm7257D3YX25 99 aa10.41□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Gm20730A0A075B5J6 119 aa10.41□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Gm44965A0A0N4SVR3 59 aa10.41□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Spink12Q9D256 87 aa10.41□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Psmb8P28063 276 aa10.4□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Triap1Q9D8Z2 76 aa10.4□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Dand5Q76LW6 185 aa10.4□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Gm12689Q8BQU9 117 aa10.4□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Ighv1-61P01749 117 aa10.4□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Chchd5Q9CQP3 110 aa10.4□□□□□ -0.74
Pcdha1-202ENSMUST00000193839 Tmem254aP0DN89 123 aa10.4□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Tmem254bP0DN90 123 aa10.4□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Tmem254cP0DN91 123 aa10.4□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Fxyd5P97808 178 aa10.4□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Reg3dQ9QUS9 175 aa10.4□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Defb29Q8BGW9 78 aa10.39□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Rnf185Q91YT2 192 aa10.39□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Lrrk2Q5S006 2527 aa10.39□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Ighv2-3A0A075B696 115 aa10.39□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Ebi3O35228 228 aa10.39□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Timm17bQ9Z0V7 172 aa10.39□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Defb2P82020 71 aa10.39□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 4930470P17RikQ9D542 155 aa10.38□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Trav9d-3A0A075B695 113 aa10.38□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Smr3aQ61900 147 aa10.38□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Igkv3-2A0A075B5P0 119 aa10.38□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Rbm3O89086 153 aaKnown RBP10.38□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Igkv4-68A0A0B4J1I7 117 aa10.38□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 P01745 121 aa10.38□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 MplkipQ9D011 178 aa10.38□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Pkd1l2Q7TN88 2461 aa10.37□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 P06328 117 aa10.37□□□□□ -0.75
Pcdha1-202ENSMUST00000193839 Gm5629P06327 117 aa10.37□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 45.9 ms