RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Trdv5A0A075B661 115 aa18.5■□□□□ 0.55
Tpm1-216ENSMUST00000113707 Gata1P17679 413 aa18.5■□□□□ 0.55
Tpm1-216ENSMUST00000113707 Ca1P13634 261 aa18.5■□□□□ 0.55
Tpm1-216ENSMUST00000113707 Gpx1P11352 201 aa18.48■□□□□ 0.55
Tpm1-216ENSMUST00000113707 Atp5lQ9CPQ8 103 aa18.48■□□□□ 0.55
Tpm1-216ENSMUST00000113707 Igkv4-91A0A075B5L2 119 aa18.47■□□□□ 0.55
Tpm1-216ENSMUST00000113707 Scgb1b11A0A087WQJ0 93 aa18.46■□□□□ 0.55
Tpm1-216ENSMUST00000113707 Defa35E9QLQ1 93 aa18.46■□□□□ 0.55
Tpm1-216ENSMUST00000113707 P18527 97 aa18.46■□□□□ 0.55
Tpm1-216ENSMUST00000113707 Tmem170bP86050 132 aa18.46■□□□□ 0.55
Tpm1-216ENSMUST00000113707 Trav7-2Q5R1I3 112 aa18.46■□□□□ 0.55
Tpm1-216ENSMUST00000113707 Ifitm1Q9D103 106 aa18.46■□□□□ 0.55
Tpm1-216ENSMUST00000113707 Gm11027G8JL69 66 aa18.46■□□□□ 0.54
Tpm1-216ENSMUST00000113707 CrygdP04342 174 aa18.46■□□□□ 0.54
Tpm1-216ENSMUST00000113707 CrygeQ03740 174 aa18.46■□□□□ 0.54
Tpm1-216ENSMUST00000113707 Gm10604Q3V0X7 143 aa18.45■□□□□ 0.54
Tpm1-216ENSMUST00000113707 F11rO88792 300 aa18.44■□□□□ 0.54
Tpm1-216ENSMUST00000113707 Gm16442D3YZG3 307 aa18.43■□□□□ 0.54
Tpm1-216ENSMUST00000113707 CrxO54751 299 aa18.43■□□□□ 0.54
Tpm1-216ENSMUST00000113707 P84751 237 aa18.43■□□□□ 0.54
Tpm1-216ENSMUST00000113707 Slc25a20Q9Z2Z6 301 aaKnown RBP18.43■□□□□ 0.54
Tpm1-216ENSMUST00000113707 Gm28051J3QMA2 81 aa18.42■□□□□ 0.54
Tpm1-216ENSMUST00000113707 Pmis2Q497Q9 96 aa18.42■□□□□ 0.54
Tpm1-216ENSMUST00000113707 Timm17aQ9Z0V8 171 aa18.42■□□□□ 0.54
Tpm1-216ENSMUST00000113707 OdaphJ3QNT8 126 aa18.41■□□□□ 0.54
Tpm1-216ENSMUST00000113707 FcorP0DJI6 106 aa18.41■□□□□ 0.54
Tpm1-216ENSMUST00000113707 Cmc4Q61908 68 aa18.41■□□□□ 0.54
Tpm1-216ENSMUST00000113707 Phlda3Q9WV95 125 aa18.41■□□□□ 0.54
Tpm1-216ENSMUST00000113707 FlnbQ80X90 2602 aaKnown RBP18.41■□□□□ 0.54
Tpm1-216ENSMUST00000113707 Tcrg-C1A0A075B5Z0 172 aa18.41■□□□□ 0.54
Tpm1-216ENSMUST00000113707 A0A286YCQ8 80 aa18.41■□□□□ 0.54
Tpm1-216ENSMUST00000113707 Tcrg-C3L7N479 172 aa18.41■□□□□ 0.54
Tpm1-216ENSMUST00000113707 CtrlQ9ER05 264 aa18.41■□□□□ 0.54
Tpm1-216ENSMUST00000113707 Scgb1b3J3QJY4 93 aa18.39■□□□□ 0.54
Tpm1-216ENSMUST00000113707 Tspo2Q9CRZ8 162 aa18.39■□□□□ 0.54
Tpm1-216ENSMUST00000113707 Higd1aQ9JLR9 95 aa18.39■□□□□ 0.54
Tpm1-216ENSMUST00000113707 Ighv8-12A0A0G2JDE1 119 aa18.39■□□□□ 0.53
Tpm1-216ENSMUST00000113707 Gm17472A0A075B683 117 aa18.38■□□□□ 0.53
Tpm1-216ENSMUST00000113707 Gm9887F6RFI0 207 aa18.38■□□□□ 0.53
Tpm1-216ENSMUST00000113707 Gm28044L7N1X0 119 aa18.37■□□□□ 0.53
Tpm1-216ENSMUST00000113707 AtrQ9JKK8 2635 aa18.36■□□□□ 0.53
Tpm1-216ENSMUST00000113707 Ighv1-5A0A0A6YWG2 117 aa18.36■□□□□ 0.53
Tpm1-216ENSMUST00000113707 Gm21693J3QK27 380 aa18.36■□□□□ 0.53
Tpm1-216ENSMUST00000113707 Rpl36aP83882 106 aaKnown RBP18.36■□□□□ 0.53
Tpm1-216ENSMUST00000113707 Q8R092 253 aa18.36■□□□□ 0.53
Tpm1-216ENSMUST00000113707 Q9D727 114 aa18.36■□□□□ 0.53
Tpm1-216ENSMUST00000113707 Ighv6-7A0A0A6YWU3 119 aa18.35■□□□□ 0.53
Tpm1-216ENSMUST00000113707 Notch3Q61982 2318 aa18.35■□□□□ 0.53
Tpm1-216ENSMUST00000113707 Eif4ebp1Q60876 117 aa18.35■□□□□ 0.53
Tpm1-216ENSMUST00000113707 Ndufa3Q9CQ91 84 aa18.35■□□□□ 0.53
Tpm1-216ENSMUST00000113707 Ndufa1O35683 70 aa18.34■□□□□ 0.53
Tpm1-216ENSMUST00000113707 Q5BN45 167 aa18.34■□□□□ 0.53
Tpm1-216ENSMUST00000113707 Nat8b-psE0CYC6 232 aa18.33■□□□□ 0.52
Tpm1-216ENSMUST00000113707 Tmem101Q91VP7 257 aa18.32■□□□□ 0.52
Tpm1-216ENSMUST00000113707 Gpha2Q925Q5 128 aa18.32■□□□□ 0.52
Tpm1-216ENSMUST00000113707 Gnb1lQ9EQ15 326 aa18.32■□□□□ 0.52
Tpm1-216ENSMUST00000113707 Igkv2-137A0A0B4J1H6 120 aa18.31■□□□□ 0.52
Tpm1-216ENSMUST00000113707 Brd3osA0A1B0GRB6 84 aa18.31■□□□□ 0.52
Tpm1-216ENSMUST00000113707 P03985 172 aa18.31■□□□□ 0.52
Tpm1-216ENSMUST00000113707 Mustn1Q99JI1 82 aa18.31■□□□□ 0.52
Tpm1-216ENSMUST00000113707 Gm1553Q66VB7 94 aa18.31■□□□□ 0.52
Tpm1-216ENSMUST00000113707 Fam19a4Q7TPG5 135 aa18.31■□□□□ 0.52
Tpm1-216ENSMUST00000113707 Ighv1-11A0A0A6YWI9 117 aa18.3■□□□□ 0.52
Tpm1-216ENSMUST00000113707 Hbb-bsA8DUK4 147 aa18.3■□□□□ 0.52
Tpm1-216ENSMUST00000113707 Hbb-b1P02088 147 aa18.3■□□□□ 0.52
Tpm1-216ENSMUST00000113707 Gng7Q61016 68 aa18.3■□□□□ 0.52
Tpm1-216ENSMUST00000113707 Znf740Q6NZQ6 180 aa18.3■□□□□ 0.52
Tpm1-216ENSMUST00000113707 Fn1P11276 2477 aaKnown RBP18.3■□□□□ 0.52
Tpm1-216ENSMUST00000113707 Igfn1Q3KNY0 2849 aa18.29■□□□□ 0.52
Tpm1-216ENSMUST00000113707 Ighv2-6-8A0A0A6YWY9 116 aa18.29■□□□□ 0.52
Tpm1-216ENSMUST00000113707 Ube2d3P61079 147 aa18.29■□□□□ 0.52
Tpm1-216ENSMUST00000113707 Ube2d2P62838 147 aa18.29■□□□□ 0.52
Tpm1-216ENSMUST00000113707 Fam240aJ3QNP9 97 aa18.29■□□□□ 0.52
Tpm1-216ENSMUST00000113707 Clec4b2Q67DU8 208 aa18.29■□□□□ 0.52
Tpm1-216ENSMUST00000113707 P01837 106 aa18.28■□□□□ 0.52
Tpm1-216ENSMUST00000113707 Igkv4-78A0A0A6YYE5 119 aa18.27■□□□□ 0.52
Tpm1-216ENSMUST00000113707 Gm45521A0A1B0GRK0 198 aa18.27■□□□□ 0.52
Tpm1-216ENSMUST00000113707 Gata3P23772 443 aa18.27■□□□□ 0.52
Tpm1-216ENSMUST00000113707 EsdQ9R0P3 282 aa18.26■□□□□ 0.51
Tpm1-216ENSMUST00000113707 Tex15F8VPN2 2785 aa18.26■□□□□ 0.51
Tpm1-216ENSMUST00000113707 Cks1brtQ3UNC9 96 aa18.24■□□□□ 0.51
Tpm1-216ENSMUST00000113707 Pradc1Q9D9N8 188 aa18.24■□□□□ 0.51
Tpm1-216ENSMUST00000113707 Isg15Q64339 161 aaKnown RBP18.24■□□□□ 0.51
Tpm1-216ENSMUST00000113707 Ankrd39Q9D2X0 183 aa18.24■□□□□ 0.51
Tpm1-216ENSMUST00000113707 Trav9d-3A0A075B695 113 aa18.22■□□□□ 0.51
Tpm1-216ENSMUST00000113707 Pla2g1bQ9Z0Y2 146 aa18.22■□□□□ 0.51
Tpm1-216ENSMUST00000113707 Tenm1Q9WTS4 2731 aa18.22■□□□□ 0.51
Tpm1-216ENSMUST00000113707 E130114P18RikF6S0S7 154 aa18.22■□□□□ 0.51
Tpm1-216ENSMUST00000113707 Tmem97Q8VD00 176 aa18.22■□□□□ 0.51
Tpm1-216ENSMUST00000113707 Q9DAA3 117 aa18.22■□□□□ 0.51
Tpm1-216ENSMUST00000113707 Klk11Q9QYN3 276 aa18.22■□□□□ 0.51
Tpm1-216ENSMUST00000113707 Nbeal2Q6ZQA0 2742 aa18.21■□□□□ 0.51
Tpm1-216ENSMUST00000113707 Gm10322F7D7I4 111 aa18.21■□□□□ 0.51
Tpm1-216ENSMUST00000113707 Fgf6P21658 208 aa18.21■□□□□ 0.51
Tpm1-216ENSMUST00000113707 Gm21370Q3T9V6 190 aa18.21■□□□□ 0.51
Tpm1-216ENSMUST00000113707 Atxn7l1Q9CZ05 146 aa18.2■□□□□ 0.5
Tpm1-216ENSMUST00000113707 3110070M22RikQ9DAQ7 118 aa18.2■□□□□ 0.5
Tpm1-216ENSMUST00000113707 Defa30E9QPZ2 93 aa18.2■□□□□ 0.5
Tpm1-216ENSMUST00000113707 Ighv1-72P01751 139 aa18.2■□□□□ 0.5
Tpm1-216ENSMUST00000113707 Wfdc17Q5SSJ1 76 aa18.2■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 48.6 ms