RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Mgst1Q91VS7 155 aa8.01□□□□□ -1.13
Ccdc28b-202ENSMUST00000106035 Mzt2Q9CQ25 159 aa8.01□□□□□ -1.13
Ccdc28b-202ENSMUST00000106035 Snai3Q9QY31 287 aa8.01□□□□□ -1.13
Ccdc28b-202ENSMUST00000106035 Prss1Q9Z1R9 246 aa8.01□□□□□ -1.13
Ccdc28b-202ENSMUST00000106035 Q24JP4 165 aa8□□□□□ -1.13
Ccdc28b-202ENSMUST00000106035 Khdc1cQ4KL78 166 aa8□□□□□ -1.13
Ccdc28b-202ENSMUST00000106035 EtdQ80SW5 59 aa8□□□□□ -1.13
Ccdc28b-202ENSMUST00000106035 March3Q8BRX9 218 aa8□□□□□ -1.13
Ccdc28b-202ENSMUST00000106035 Atp5lQ9CPQ8 103 aa8□□□□□ -1.13
Ccdc28b-202ENSMUST00000106035 Trav14n-3A0A075B645 120 aa7.99□□□□□ -1.13
Ccdc28b-202ENSMUST00000106035 Ighv13-2A0A0A6YWN3 119 aa7.99□□□□□ -1.13
Ccdc28b-202ENSMUST00000106035 Igkv3-12A0A140T8P0 119 aa7.99□□□□□ -1.13
Ccdc28b-202ENSMUST00000106035 Defa16P50714 93 aa7.99□□□□□ -1.13
Ccdc28b-202ENSMUST00000106035 Gm5617Q91VN2 117 aa7.99□□□□□ -1.13
Ccdc28b-202ENSMUST00000106035 Tmed6Q9CQG0 239 aa7.99□□□□□ -1.13
Ccdc28b-202ENSMUST00000106035 Ndufa6Q9CQZ5 131 aaKnown RBP7.99□□□□□ -1.13
Ccdc28b-202ENSMUST00000106035 Lhfpl3Q9CTN8 222 aa7.99□□□□□ -1.13
Ccdc28b-202ENSMUST00000106035 Gm14214V9GX35 225 aa7.99□□□□□ -1.13
Ccdc28b-202ENSMUST00000106035 PcloQ9QYX7 5068 aa7.98□□□□□ -1.13
Ccdc28b-202ENSMUST00000106035 Zfp951A0A087WRH0 451 aa7.98□□□□□ -1.13
Ccdc28b-202ENSMUST00000106035 Igll1P20764 209 aa7.98□□□□□ -1.13
Ccdc28b-202ENSMUST00000106035 Scgb3a2Q920H1 91 aa7.98□□□□□ -1.13
Ccdc28b-202ENSMUST00000106035 Gpx7Q99LJ6 186 aa7.98□□□□□ -1.13
Ccdc28b-202ENSMUST00000106035 4930556J24RikQ9D4U7 146 aa7.98□□□□□ -1.13
Ccdc28b-202ENSMUST00000106035 Trav14d-1A0A075B6B1 121 aa7.97□□□□□ -1.13
Ccdc28b-202ENSMUST00000106035 Gm9513B3GLJ6 99 aa7.97□□□□□ -1.13
Ccdc28b-202ENSMUST00000106035 Rnf212F6TQD1 307 aa7.97□□□□□ -1.13
Ccdc28b-202ENSMUST00000106035 Cd24P24807 76 aa7.97□□□□□ -1.13
Ccdc28b-202ENSMUST00000106035 CnbpP53996 178 aaKnown RBP7.97□□□□□ -1.13
Ccdc28b-202ENSMUST00000106035 Tcrg-C1A0A075B5Z0 172 aa7.96□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Gm18596A0A1W2P860 280 aa7.96□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Nat8b-psE0CYC6 232 aa7.96□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 1810011H11RikE9PVZ2 95 aa7.96□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Tcrg-C3L7N479 172 aa7.96□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 EsdQ9R0P3 282 aa7.96□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Slc25a20Q9Z2Z6 301 aaKnown RBP7.96□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Dnhd1D3Z2X2 4750 aa7.96□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Ighv8-2A0A0A6YW58 119 aa7.95□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Omt2bD3YX29 119 aa7.95□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Ighv1-61P01749 117 aa7.95□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Rpl23P62830 140 aaKnown RBP7.95□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Trav3-3Q5R1C3 114 aa7.95□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Tmed3Q78IS1 221 aa7.95□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Prss3Q792Z0 246 aaKnown RBP7.95□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Commd7Q8BG94 200 aa7.95□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Batf3Q9D275 118 aa7.95□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 P01793 123 aa7.94□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Twist1P26687 206 aa7.94□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Plac8l1Q08EJ0 177 aa7.94□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Polr2kQ63871 58 aa7.94□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Pkhd1l1Q80ZA4 4249 aa7.94□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Abca13Q5SSE9 5034 aa7.94□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Trav7-4A0A075B6C1 113 aa7.93□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Gm11213A0A1B0GR83 88 aa7.93□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 OdaphJ3QNT8 126 aa7.93□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Adcyap1O70176 175 aa7.93□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 PigyP0C1P0 71 aa7.93□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Rab4aP56371 218 aa7.93□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Trav7d-4Q5R1H9 113 aa7.93□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Atg101Q9D8Z6 218 aa7.93□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 1700012A03RikQ9DAF1 130 aa7.93□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 HydinQ80W93 5154 aa7.93□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Trav7n-4A0A075B620 113 aa7.92□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Igkv4-78A0A0A6YYE5 119 aa7.92□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Tmem238A9JSM3 176 aa7.92□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Krtap11-1E9Q2E9 183 aa7.92□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Gm9944Q8C559 102 aa7.92□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Gm16223Q8CBM3 117 aa7.92□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Tm4sf20Q9CQY8 226 aa7.92□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Q9CR34 168 aa7.92□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Ighv2-9A0A075B5Q5 116 aa7.91□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Gm12355A2A4X6 163 aa7.91□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 1700015F17RikD3YUK8 150 aa7.91□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Umad1E0CX23 159 aa7.91□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Prh1P05142 261 aa7.91□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 TtrP07309 147 aa7.91□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Srsf3P84104 164 aaKnown RBP7.91□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Pex7P97865 318 aa7.91□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Eif4ebp1Q60876 117 aa7.91□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Mycbp2Q7TPH6 4711 aa7.9□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Krtap19-5O08632 62 aa7.9□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 P01736 120 aa7.9□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Cfap126Q6P8X9 189 aa7.9□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Ndufa12Q7TMF3 145 aaKnown RBP7.9□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 ErasQ7TN89 227 aa7.9□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Q9D131 166 aa7.9□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Tex48Q9DA81 110 aa7.9□□□□□ -1.14
Ccdc28b-202ENSMUST00000106035 Gm10065F6TJM2 114 aa7.89□□□□□ -1.15
Ccdc28b-202ENSMUST00000106035 Sdhaf1Q3U276 118 aa7.89□□□□□ -1.15
Ccdc28b-202ENSMUST00000106035 Med28Q920D3 178 aa7.89□□□□□ -1.15
Ccdc28b-202ENSMUST00000106035 Pdzd11Q9CZG9 140 aa7.89□□□□□ -1.15
Ccdc28b-202ENSMUST00000106035 Trav7-6A0A075B640 112 aa7.88□□□□□ -1.15
Ccdc28b-202ENSMUST00000106035 Esp38A8R0X1 80 aa7.88□□□□□ -1.15
Ccdc28b-202ENSMUST00000106035 Esp3J3QN49 87 aa7.88□□□□□ -1.15
Ccdc28b-202ENSMUST00000106035 Rpl32P62911 135 aaKnown RBP7.88□□□□□ -1.15
Ccdc28b-202ENSMUST00000106035 MobpQ9D2P8 170 aa7.88□□□□□ -1.15
Ccdc28b-202ENSMUST00000106035 Gpr15lA0A0B4J1N3 78 aa7.87□□□□□ -1.15
Ccdc28b-202ENSMUST00000106035 Nat8f4G5E8L3 226 aa7.87□□□□□ -1.15
Ccdc28b-202ENSMUST00000106035 Sumo2P61957 95 aaKnown RBP7.87□□□□□ -1.15
Ccdc28b-202ENSMUST00000106035 Cd33Q63994 403 aa7.87□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 43.6 ms