RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Umad1E0CX23 159 aa16,69■□□□□ 0,26
Upf3a-201ENSMUST00000043767 Tex26Q0VB26 296 aa16,69■□□□□ 0,26
Upf3a-201ENSMUST00000043767 Srrm2Q8BTI8 2703 aaKnown RBP16,68■□□□□ 0,26
Upf3a-201ENSMUST00000043767 P06328 117 aa16,68■□□□□ 0,26
Upf3a-201ENSMUST00000043767 Clec5aQ9R007 190 aa16,68■□□□□ 0,26
Upf3a-201ENSMUST00000043767 P01794 123 aa16,67■□□□□ 0,26
Upf3a-201ENSMUST00000043767 Ndufa4Q62425 82 aaKnown RBP16,67■□□□□ 0,26
Upf3a-201ENSMUST00000043767 Defa34D3Z0J0 93 aa16,66■□□□□ 0,26
Upf3a-201ENSMUST00000043767 Defa37K9J724 93 aa16,66■□□□□ 0,26
Upf3a-201ENSMUST00000043767 Defa5P28312 93 aa16,66■□□□□ 0,26
Upf3a-201ENSMUST00000043767 Lyrm9Q3UN90 78 aa16,66■□□□□ 0,26
Upf3a-201ENSMUST00000043767 CrygfQ9CXV3 174 aa16,66■□□□□ 0,26
Upf3a-201ENSMUST00000043767 Ovol2Q8CIV7 274 aa16,66■□□□□ 0,26
Upf3a-201ENSMUST00000043767 Ormdl2Q9CQZ0 153 aa16,66■□□□□ 0,26
Upf3a-201ENSMUST00000043767 Gm7138L7N2C3 230 aa16,65■□□□□ 0,26
Upf3a-201ENSMUST00000043767 Rpl35aO55142 110 aa16,65■□□□□ 0,26
Upf3a-201ENSMUST00000043767 MdfiP70331 251 aa16,65■□□□□ 0,26
Upf3a-201ENSMUST00000043767 Try10Q792Z1 246 aaKnown RBP16,65■□□□□ 0,26
Upf3a-201ENSMUST00000043767 Gm3238W4VSP7 230 aa16,65■□□□□ 0,26
Upf3a-201ENSMUST00000043767 Smim1P0C8K7 78 aa16,65■□□□□ 0,26
Upf3a-201ENSMUST00000043767 TcraP01849 138 aa16,64■□□□□ 0,25
Upf3a-201ENSMUST00000043767 TshbP12656 138 aa16,64■□□□□ 0,25
Upf3a-201ENSMUST00000043767 Gata3P23772 443 aa16,64■□□□□ 0,25
Upf3a-201ENSMUST00000043767 GalmQ8K157 342 aa16,64■□□□□ 0,25
Upf3a-201ENSMUST00000043767 Tnfrsf23Q9ER63 176 aa16,64■□□□□ 0,25
Upf3a-201ENSMUST00000043767 Gm9922Q8C3P1 144 aa16,63■□□□□ 0,25
Upf3a-201ENSMUST00000043767 Mrpl36Q99N90 102 aa16,63■□□□□ 0,25
Upf3a-201ENSMUST00000043767 8030423J24RikQ9CX45 142 aa16,63■□□□□ 0,25
Upf3a-201ENSMUST00000043767 Rs1Q9Z1L4 224 aa16,63■□□□□ 0,25
Upf3a-201ENSMUST00000043767 Gm29289A0A087WPY7 166 aa16,62■□□□□ 0,25
Upf3a-201ENSMUST00000043767 Gm4064A0A087WR82 380 aa16,62■□□□□ 0,25
Upf3a-201ENSMUST00000043767 Gm10352B2RWR6 380 aa16,62■□□□□ 0,25
Upf3a-201ENSMUST00000043767 Gm21693J3QK27 380 aa16,62■□□□□ 0,25
Upf3a-201ENSMUST00000043767 Rbmy1a1O35698 380 aa16,62■□□□□ 0,25
Upf3a-201ENSMUST00000043767 Sdhaf1Q3U276 118 aa16,62■□□□□ 0,25
Upf3a-201ENSMUST00000043767 Khdc1cQ4KL78 166 aa16,62■□□□□ 0,25
Upf3a-201ENSMUST00000043767 Q9D727 114 aa16,62■□□□□ 0,25
Upf3a-201ENSMUST00000043767 Vamp8O70404 101 aa16,61■□□□□ 0,25
Upf3a-201ENSMUST00000043767 Defa24Q5G865 93 aa16,61■□□□□ 0,25
Upf3a-201ENSMUST00000043767 Atxn7l1Q9CZ05 146 aa16,61■□□□□ 0,25
Upf3a-201ENSMUST00000043767 ApcQ61315 2845 aa16,61■□□□□ 0,25
Upf3a-201ENSMUST00000043767 Krtap16-1A2A5X5 502 aa16,61■□□□□ 0,25
Upf3a-201ENSMUST00000043767 P01753 117 aa16,61■□□□□ 0,25
Upf3a-201ENSMUST00000043767 S100a4P07091 101 aa16,61■□□□□ 0,25
Upf3a-201ENSMUST00000043767 Sumo2P61957 95 aaKnown RBP16,61■□□□□ 0,25
Upf3a-201ENSMUST00000043767 Spag11Q8K4N2 71 aa16,61■□□□□ 0,25
Upf3a-201ENSMUST00000043767 Gkn1Q9CR36 201 aa16,6■□□□□ 0,25
Upf3a-201ENSMUST00000043767 Spata3Q9D9T6 193 aa16,6■□□□□ 0,25
Upf3a-201ENSMUST00000043767 Igsf10Q3V1M1 2594 aa16,6■□□□□ 0,25
Upf3a-201ENSMUST00000043767 Lgals6O54891 301 aa16,6■□□□□ 0,25
Upf3a-201ENSMUST00000043767 Egr2P08152 470 aa16,6■□□□□ 0,25
Upf3a-201ENSMUST00000043767 Prss29Q99MS4 279 aa16,6■□□□□ 0,25
Upf3a-201ENSMUST00000043767 Mrpl35Q9CQL6 188 aa16,6■□□□□ 0,25
Upf3a-201ENSMUST00000043767 Igkv4-74A0A0B4J1I3 119 aa16,59■□□□□ 0,25
Upf3a-201ENSMUST00000043767 Defb42Q8BVB5 75 aa16,59■□□□□ 0,25
Upf3a-201ENSMUST00000043767 Gm14137Q8CE97 175 aa16,59■□□□□ 0,25
Upf3a-201ENSMUST00000043767 AamdcQ8R0P4 122 aa16,58■□□□□ 0,25
Upf3a-201ENSMUST00000043767 Foxi1Q922I5 372 aa16,58■□□□□ 0,25
Upf3a-201ENSMUST00000043767 Iglc1A0A0G2JE99 106 aa16,58■□□□□ 0,24
Upf3a-201ENSMUST00000043767 P01843 105 aa16,58■□□□□ 0,24
Upf3a-201ENSMUST00000043767 C1qcQ02105 246 aa16,58■□□□□ 0,24
Upf3a-201ENSMUST00000043767 HampQ9EQ21 83 aa16,57■□□□□ 0,24
Upf3a-201ENSMUST00000043767 Gm17430F6RSK3 157 aa16,57■□□□□ 0,24
Upf3a-201ENSMUST00000043767 Rpl24Q8BP67 157 aaKnown RBP16,57■□□□□ 0,24
Upf3a-201ENSMUST00000043767 P01837 106 aa16,56■□□□□ 0,24
Upf3a-201ENSMUST00000043767 Mustn1Q99JI1 82 aa16,56■□□□□ 0,24
Upf3a-201ENSMUST00000043767 Slamf6Q9ET39 351 aa16,56■□□□□ 0,24
Upf3a-201ENSMUST00000043767 Tmem238A9JSM3 176 aa16,55■□□□□ 0,24
Upf3a-201ENSMUST00000043767 P18527 97 aa16,55■□□□□ 0,24
Upf3a-201ENSMUST00000043767 Gm6040Q4QY32 63 aa16,55■□□□□ 0,24
Upf3a-201ENSMUST00000043767 Gm16223Q8CBM3 117 aa16,55■□□□□ 0,24
Upf3a-201ENSMUST00000043767 Igkv4-68A0A0B4J1I7 117 aa16,54■□□□□ 0,24
Upf3a-201ENSMUST00000043767 Cox8cA6H666 72 aa16,54■□□□□ 0,24
Upf3a-201ENSMUST00000043767 Gm7137J3QMW1 236 aa16,54■□□□□ 0,24
Upf3a-201ENSMUST00000043767 Gm10295Q8CCF3 114 aa16,54■□□□□ 0,24
Upf3a-201ENSMUST00000043767 Rbmxl2Q9DAE2 385 aaKnown RBP16,54■□□□□ 0,24
Upf3a-201ENSMUST00000043767 Gm26920S4R2A5 56 aa16,54■□□□□ 0,24
Upf3a-201ENSMUST00000043767 CrygdP04342 174 aa16,54■□□□□ 0,24
Upf3a-201ENSMUST00000043767 CrygeQ03740 174 aa16,54■□□□□ 0,24
Upf3a-201ENSMUST00000043767 Rpl36-ps4A0A140T8U4 117 aa16,53■□□□□ 0,24
Upf3a-201ENSMUST00000043767 Rpl32P62911 135 aaKnown RBP16,53■□□□□ 0,24
Upf3a-201ENSMUST00000043767 Defb45Q3V490 66 aa16,53■□□□□ 0,24
Upf3a-201ENSMUST00000043767 Crip2Q9DCT8 208 aaKnown RBP16,53■□□□□ 0,24
Upf3a-201ENSMUST00000043767 Hrct1Q9D6B9 109 aa16,52■□□□□ 0,23
Upf3a-201ENSMUST00000043767 Scgb1b24B1B0N6 92 aa16,51■□□□□ 0,23
Upf3a-201ENSMUST00000043767 Gm10490F6VBM2 120 aa16,51■□□□□ 0,23
Upf3a-201ENSMUST00000043767 Ccl25O35903 144 aa16,51■□□□□ 0,23
Upf3a-201ENSMUST00000043767 Gm5629P06327 117 aa16,51■□□□□ 0,23
Upf3a-201ENSMUST00000043767 Olfr313Q5NC55 308 aa16,51■□□□□ 0,23
Upf3a-201ENSMUST00000043767 Ifi27l2aQ8R412 90 aa16,51■□□□□ 0,23
Upf3a-201ENSMUST00000043767 Q9D8Q6 235 aa16,51■□□□□ 0,23
Upf3a-201ENSMUST00000043767 Brd3osA0A1B0GRB6 84 aa16,5■□□□□ 0,23
Upf3a-201ENSMUST00000043767 Cks1brtQ3UNC9 96 aa16,5■□□□□ 0,23
Upf3a-201ENSMUST00000043767 Gm815Q3UWS2 115 aa16,5■□□□□ 0,23
Upf3a-201ENSMUST00000043767 Fam240aJ3QNP9 97 aa16,49■□□□□ 0,23
Upf3a-201ENSMUST00000043767 Pradc1Q9D9N8 188 aa16,49■□□□□ 0,23
Upf3a-201ENSMUST00000043767 Gm45717A0A1B0GT68 152 aa16,48■□□□□ 0,23
Upf3a-201ENSMUST00000043767 Mrps12O35680 139 aa16,48■□□□□ 0,23
Upf3a-201ENSMUST00000043767 Tcrg-C3L7N479 172 aa16,47■□□□□ 0,23
Upf3a-201ENSMUST00000043767 P03985 172 aa16,47■□□□□ 0,23
Retrieved 100 of 22,080 RNA–protein pairs in 58,7 ms