RNA–Protein interactions for RNA: ENSMUST00000034131.9

Vps35-201, Transcript of Vacuolar protein sorting-associated protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps35, Length 3,474 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35-201ENSMUST00000034131 Pglyrp4Q0VB07 374 aa10.01□□□□□ -0.81
Vps35-201ENSMUST00000034131 Gm9922Q8C3P1 144 aa10.01□□□□□ -0.81
Vps35-201ENSMUST00000034131 Gm20730A0A075B5J6 119 aa10□□□□□ -0.81
Vps35-201ENSMUST00000034131 Gm20726G3UX18 150 aa10□□□□□ -0.81
Vps35-201ENSMUST00000034131 4930442H23RikQ9D5G7 103 aa10□□□□□ -0.81
Vps35-201ENSMUST00000034131 Edn2P22389 175 aa9.99□□□□□ -0.81
Vps35-201ENSMUST00000034131 Ly6gP35461 111 aa9.99□□□□□ -0.81
Vps35-201ENSMUST00000034131 Eif4ebp1Q60876 117 aa9.99□□□□□ -0.81
Vps35-201ENSMUST00000034131 Hes7Q8BKT2 225 aa9.99□□□□□ -0.81
Vps35-201ENSMUST00000034131 P01820 115 aa9.99□□□□□ -0.81
Vps35-201ENSMUST00000034131 Defb30Q30KN4 75 aa9.99□□□□□ -0.81
Vps35-201ENSMUST00000034131 ScxQ64124 207 aa9.99□□□□□ -0.81
Vps35-201ENSMUST00000034131 Q9DAB9 146 aa9.99□□□□□ -0.81
Vps35-201ENSMUST00000034131 Phpt1Q9DAK9 124 aa9.99□□□□□ -0.81
Vps35-201ENSMUST00000034131 Tcte2E9PY37 120 aa9.98□□□□□ -0.81
Vps35-201ENSMUST00000034131 Gm11020F6ZGD5 61 aa9.98□□□□□ -0.81
Vps35-201ENSMUST00000034131 Znf740Q6NZQ6 180 aa9.98□□□□□ -0.81
Vps35-201ENSMUST00000034131 Smg1Q8BKX6 3658 aaKnown RBP9.98□□□□□ -0.81
Vps35-201ENSMUST00000034131 DspE9Q557 2883 aaKnown RBP9.98□□□□□ -0.81
Vps35-201ENSMUST00000034131 Ubtd1Q91WB7 227 aa9.98□□□□□ -0.81
Vps35-201ENSMUST00000034131 Trav14d-3-dv8A0A075B619 120 aa9.98□□□□□ -0.81
Vps35-201ENSMUST00000034131 Gm4861Q8C5A4 106 aa9.98□□□□□ -0.81
Vps35-201ENSMUST00000034131 Fam216aQ9DB54 251 aa9.98□□□□□ -0.81
Vps35-201ENSMUST00000034131 Cep250Q60952 2414 aa9.97□□□□□ -0.81
Vps35-201ENSMUST00000034131 Gm3618D3Z4P5 127 aa9.97□□□□□ -0.81
Vps35-201ENSMUST00000034131 Gm2916Q9D9B9 127 aa9.97□□□□□ -0.81
Vps35-201ENSMUST00000034131 Casp6O08738 276 aa9.97□□□□□ -0.81
Vps35-201ENSMUST00000034131 Socs3O35718 225 aa9.97□□□□□ -0.81
Vps35-201ENSMUST00000034131 Spg11Q3UHA3 2430 aa9.97□□□□□ -0.81
Vps35-201ENSMUST00000034131 Ighv1-85A0A075B5Y6 117 aa9.97□□□□□ -0.81
Vps35-201ENSMUST00000034131 Gm3285A0A1W2P7U0 201 aa9.96□□□□□ -0.81
Vps35-201ENSMUST00000034131 Gm20499D3Z4G5 72 aa9.96□□□□□ -0.81
Vps35-201ENSMUST00000034131 Esm1Q9QYY7 184 aa9.96□□□□□ -0.82
Vps35-201ENSMUST00000034131 Fam208bQ5DTT3 2382 aa9.96□□□□□ -0.82
Vps35-201ENSMUST00000034131 OdaphJ3QNT8 126 aa9.95□□□□□ -0.82
Vps35-201ENSMUST00000034131 P01750 117 aa9.95□□□□□ -0.82
Vps35-201ENSMUST00000034131 H1fxQ80ZM5 188 aa9.95□□□□□ -0.82
Vps35-201ENSMUST00000034131 Pla2g2dQ9WVF6 144 aa9.95□□□□□ -0.82
Vps35-201ENSMUST00000034131 Med13lQ6JPI3 2207 aa9.95□□□□□ -0.82
Vps35-201ENSMUST00000034131 Dopey1Q8BL99 2399 aa9.95□□□□□ -0.82
Vps35-201ENSMUST00000034131 Ighv1-64A0A075B5X3 117 aa9.95□□□□□ -0.82
Vps35-201ENSMUST00000034131 Prelid3aQ8VE85 172 aa9.95□□□□□ -0.82
Vps35-201ENSMUST00000034131 Cxcl14Q9WUQ5 99 aa9.95□□□□□ -0.82
Vps35-201ENSMUST00000034131 Trbv16A0A0B4J1H3 115 aa9.94□□□□□ -0.82
Vps35-201ENSMUST00000034131 MalO09198 153 aa9.94□□□□□ -0.82
Vps35-201ENSMUST00000034131 Igf1P05017 153 aa9.94□□□□□ -0.82
Vps35-201ENSMUST00000034131 LhbO09108 141 aa9.94□□□□□ -0.82
Vps35-201ENSMUST00000034131 CrygdP04342 174 aa9.94□□□□□ -0.82
Vps35-201ENSMUST00000034131 Gatd1Q8BFQ8 220 aa9.94□□□□□ -0.82
Vps35-201ENSMUST00000034131 Cd164l2Q9D6W7 172 aa9.94□□□□□ -0.82
Vps35-201ENSMUST00000034131 Ighv1-12A0A0A6YXJ9 117 aa9.94□□□□□ -0.82
Vps35-201ENSMUST00000034131 TeppQ6IMH0 216 aa9.93□□□□□ -0.82
Vps35-201ENSMUST00000034131 Trav13d-1A0A075B606 110 aa9.93□□□□□ -0.82
Vps35-201ENSMUST00000034131 Pglyrp1O88593 182 aa9.93□□□□□ -0.82
Vps35-201ENSMUST00000034131 CirbpP60824 172 aaKnown RBP9.93□□□□□ -0.82
Vps35-201ENSMUST00000034131 Atp5g1Q9CR84 136 aa9.93□□□□□ -0.82
Vps35-201ENSMUST00000034131 Ndufb4Q9CQC7 129 aa9.92□□□□□ -0.82
Vps35-201ENSMUST00000034131 Ifitm1Q9D103 106 aa9.92□□□□□ -0.82
Vps35-201ENSMUST00000034131 Ndufa11Q9D8B4 141 aa9.92□□□□□ -0.82
Vps35-201ENSMUST00000034131 Mrps21P58059 87 aa9.92□□□□□ -0.82
Vps35-201ENSMUST00000034131 Dido1Q8C9B9 2256 aaKnown RBP9.92□□□□□ -0.82
Vps35-201ENSMUST00000034131 Ighv1-50A0A075B5W1 117 aa9.91□□□□□ -0.82
Vps35-201ENSMUST00000034131 Spag11Q8K4N2 71 aa9.91□□□□□ -0.82
Vps35-201ENSMUST00000034131 Ighv2-6-8A0A0A6YWY9 116 aa9.91□□□□□ -0.82
Vps35-201ENSMUST00000034131 Gm9887F6RFI0 207 aa9.91□□□□□ -0.82
Vps35-201ENSMUST00000034131 Timm17bQ9Z0V7 172 aa9.91□□□□□ -0.82
Vps35-201ENSMUST00000034131 Eif4ebp3Q80VV3 101 aa9.91□□□□□ -0.82
Vps35-201ENSMUST00000034131 Msrb2Q78J03 175 aa9.9□□□□□ -0.82
Vps35-201ENSMUST00000034131 Spata25Q9DA57 226 aa9.9□□□□□ -0.82
Vps35-201ENSMUST00000034131 AI854703Q8BIN3 203 aa9.9□□□□□ -0.82
Vps35-201ENSMUST00000034131 Trav4-3A0A0B4J1K1 110 aa9.89□□□□□ -0.83
Vps35-201ENSMUST00000034131 Defa7P50705 93 aa9.88□□□□□ -0.83
Vps35-201ENSMUST00000034131 Trav11A0A0B4J1J9 114 aa9.88□□□□□ -0.83
Vps35-201ENSMUST00000034131 3110070M22RikQ9DAQ7 118 aa9.88□□□□□ -0.83
Vps35-201ENSMUST00000034131 Ly6hQ9WUC3 139 aa9.88□□□□□ -0.83
Vps35-201ENSMUST00000034131 Gm29666A0A087WQ99 126 aa9.88□□□□□ -0.83
Vps35-201ENSMUST00000034131 Igkv4-91A0A075B5L2 119 aa9.87□□□□□ -0.83
Vps35-201ENSMUST00000034131 Xcl1P47993 114 aa9.87□□□□□ -0.83
Vps35-201ENSMUST00000034131 CdsnQ7TPC1 561 aa9.87□□□□□ -0.83
Vps35-201ENSMUST00000034131 HampQ9EQ21 83 aa9.87□□□□□ -0.83
Vps35-201ENSMUST00000034131 AngP21570 145 aa9.87□□□□□ -0.83
Vps35-201ENSMUST00000034131 Edn3P48299 214 aa9.87□□□□□ -0.83
Vps35-201ENSMUST00000034131 Defa21Q8C1P2 93 aa9.87□□□□□ -0.83
Vps35-201ENSMUST00000034131 Mrpl52Q9D0Y8 121 aa9.87□□□□□ -0.83
Vps35-201ENSMUST00000034131 E130116L18RikQ8BMV6 101 aa9.86□□□□□ -0.83
Vps35-201ENSMUST00000034131 Samd13D3YUG0 102 aa9.86□□□□□ -0.83
Vps35-201ENSMUST00000034131 Gm17472A0A075B683 117 aa9.86□□□□□ -0.83
Vps35-201ENSMUST00000034131 Trav6-4A0A075B6B4 115 aa9.86□□□□□ -0.83
Vps35-201ENSMUST00000034131 Zfp951A0A087WRH0 451 aa9.86□□□□□ -0.83
Vps35-201ENSMUST00000034131 Ndufs7Q9DC70 224 aa9.86□□□□□ -0.83
Vps35-201ENSMUST00000034131 4930518I15RikQ3V2W7 57 aa9.85□□□□□ -0.83
Vps35-201ENSMUST00000034131 A830031A19RikQ8BNT5 113 aa9.85□□□□□ -0.83
Vps35-201ENSMUST00000034131 5730596B20RikQ8BQ08 205 aa9.85□□□□□ -0.83
Vps35-201ENSMUST00000034131 SelenowP63300 88 aa9.84□□□□□ -0.83
Vps35-201ENSMUST00000034131 Ptprz1B9EKR1 2312 aa9.84□□□□□ -0.83
Vps35-201ENSMUST00000034131 3110018I06RikQ9CXS0 120 aa9.84□□□□□ -0.83
Vps35-201ENSMUST00000034131 1700010B08RikQ9DAI7 102 aa9.84□□□□□ -0.83
Vps35-201ENSMUST00000034131 Klk11Q9QYN3 276 aa9.84□□□□□ -0.83
Vps35-201ENSMUST00000034131 Dnal4Q9DCM4 105 aa9.83□□□□□ -0.84
Vps35-201ENSMUST00000034131 Rps28P62858 69 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 78 ms