RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Ly6g5bQ8K1T4 194 aa7.26□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 NpbQ8K4P1 119 aa7.26□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Prrc2cQ3TLH4 2846 aaKnown RBP7.26□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 MsmbO08540 113 aa7.25□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Cdx4Q07424 282 aa7.25□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Gtsf1lQ9CWD0 151 aa7.25□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Rtl10D3YWW5 146 aa7.25□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Rbfox3Q8BIF2 374 aa7.25□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Wnk1P83741 2377 aa7.25□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Ighv6-7A0A0A6YWU3 119 aa7.24□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Ighv1-82A0A0G2JEU7 117 aa7.24□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Gm904Q3V2L5 102 aa7.24□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 9130213A22RikQ3V3T2 120 aa7.24□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 UrahQ9CRB3 118 aa7.24□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Mrpl36Q99N90 102 aa7.24□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Ighv1-50A0A075B5W1 117 aa7.24□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 P01791 123 aa7.24□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Ighv1-12A0A0A6YXJ9 117 aa7.24□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Sorl1O88307 2215 aaKnown RBP7.23□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Gm9195A0A140LHT4 2805 aa7.23□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Fhl1P97447 280 aaKnown RBP7.23□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Gm10767Q3TQP0 103 aa7.23□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Trav7d-3Q5R1I1 112 aa7.23□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 PdpnQ62011 172 aa7.23□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 AamdcQ8R0P4 122 aa7.23□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Hoxd3P09027 433 aa7.23□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 7420426K07RikQ3UX66 186 aa7.23□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Gm26938S4R185 226 aa7.23□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Notch3Q61982 2318 aa7.22□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Ndufa4l2Q4FZG9 87 aa7.22□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Srsf12Q8C8K3 266 aa7.22□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Rnf183Q8QZS5 190 aa7.22□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Gpx7Q99LJ6 186 aa7.22□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Znf580Q9DB38 172 aa7.22□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Smim10l1A0A087WNQ7 89 aa7.22□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Gkn1Q9CR36 201 aa7.22□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Ankrd39Q9D2X0 183 aa7.22□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Iglc1A0A0G2JE99 106 aa7.22□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Gm28038F7BCN9 126 aa7.22□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Pradc1Q9D9N8 188 aa7.22□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 4930447F04RikA2AFR2 126 aa7.21□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Tcrg-C3L7N479 172 aa7.21□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Gm26602M0QWA4 95 aa7.21□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 P03985 172 aa7.21□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Cd24P24807 76 aa7.21□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 BtcQ05928 177 aa7.21□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Ifi27l2aQ8R412 90 aa7.21□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Tex26Q0VB26 296 aa7.21□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Gatd1Q8BFQ8 220 aa7.21□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Mapk1ip1lQ8BH93 242 aa7.21□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Ucn2Q99ML8 113 aa7.21□□□□□ -1.25
Sh3rf1-202ENSMUST00000209611 Trav14n-2A0A0G2JDF5 121 aa7.21□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 P01756 117 aa7.21□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 P01757 117 aa7.21□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Trav12-3A0A075B648 115 aa7.21□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Gm29666A0A087WQ99 126 aa7.21□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 B230307C23RikQ8BLB2 64 aa7.21□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Ifitm2Q99J93 144 aa7.21□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Ighv2-7A0A075B5Q8 116 aa7.2□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Hist1h4aP62806 103 aaKnown RBP7.2□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Tmem86bQ497J1 226 aa7.2□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Q5BN45 167 aa7.2□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Odf3Q920N1 254 aa7.2□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Fam241bQ9D882 120 aa7.2□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Ighv5-9-1A0A0A6YVS4 126 aa7.2□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 MdfiP70331 251 aa7.2□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Bri3P28662 125 aa7.2□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Odf1Q61999 247 aa7.2□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Ighv12-3A0A075B5T1 117 aa7.19□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Psmg4P0C7N9 123 aa7.19□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Gm1553Q66VB7 94 aa7.19□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Vmn1r216Q8R257 298 aa7.19□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Tmem101Q91VP7 257 aa7.19□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Trav9-2A0A075B647 113 aa7.19□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Trav9-4A0A0B4J1K2 113 aa7.19□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 P06334 169 aa7.19□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Olfr311Q5NC59 308 aa7.19□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Q9DAB9 146 aa7.19□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Slc25a20Q9Z2Z6 301 aaKnown RBP7.19□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 BC067074F6RXI4 2391 aa7.19□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Rpl35aO55142 110 aa7.19□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Csn3P06796 181 aa7.19□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Tal2Q62282 108 aa7.19□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Fam222aQ6PGH4 453 aa7.19□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Cox6cQ9CPQ1 76 aa7.19□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Igkv4-70A0A0B4J1I5 116 aa7.19□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Gm2564F6Z9S8 108 aa7.19□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Ccl19O70460 108 aa7.19□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Foxc1Q61572 553 aa7.19□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 CirbpP60824 172 aaKnown RBP7.18□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 GalmQ8K157 342 aa7.18□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Cfc1P97766 202 aa7.18□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Prss29Q99MS4 279 aa7.18□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Trbv14A0A140T8L9 115 aa7.18□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Tmem243B2RVB9 118 aa7.18□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Rnase1P00683 149 aa7.18□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Ang3P97802 145 aa7.18□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Olfr312Q7TRZ9 308 aa7.18□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 Ndufb4Q9CQC7 129 aa7.18□□□□□ -1.26
Sh3rf1-202ENSMUST00000209611 C2cd3Q52KB6 2323 aa7.18□□□□□ -1.26
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms